BLASTX nr result

ID: Cimicifuga21_contig00023061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023061
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264487.2| PREDICTED: uncharacterized protein LOC100244...   127   1e-27
ref|XP_002302151.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
emb|CBI29343.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   125   5e-27
ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   124   8e-27

>ref|XP_002264487.2| PREDICTED: uncharacterized protein LOC100244254 [Vitis vinifera]
          Length = 1576

 Score =  127 bits (319), Expect = 1e-27
 Identities = 59/74 (79%), Positives = 64/74 (86%)
 Frame = -2

Query: 222  VSLEEEIDYVRVLNGVLPKDIRVISWCPVPNDFHARFSCLSREYKYLFWRENLDLPAMEI 43
            V+ E EIDY+RVLN VLPKDIRV+ WCPVP  FHARFSCLSREYKY FWR NL++ AME 
Sbjct: 1319 VNKEGEIDYMRVLNRVLPKDIRVMGWCPVPIGFHARFSCLSREYKYFFWRGNLNILAMES 1378

Query: 42   AGKKFVGEHDFRNF 1
            AGKKFVGEHDFRNF
Sbjct: 1379 AGKKFVGEHDFRNF 1392


>ref|XP_002302151.1| predicted protein [Populus trichocarpa] gi|222843877|gb|EEE81424.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/69 (79%), Positives = 61/69 (88%)
 Frame = -2

Query: 207 EIDYVRVLNGVLPKDIRVISWCPVPNDFHARFSCLSREYKYLFWRENLDLPAMEIAGKKF 28
           EIDYVRVLNGVLPKDIR++ WCPVP+DF ARFSCLSREYKY FW +NL+L  ME AGKK 
Sbjct: 191 EIDYVRVLNGVLPKDIRIVGWCPVPSDFSARFSCLSREYKYFFWNDNLNLLVMETAGKKL 250

Query: 27  VGEHDFRNF 1
           +GEHDFRNF
Sbjct: 251 IGEHDFRNF 259


>emb|CBI29343.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/71 (81%), Positives = 62/71 (87%)
 Frame = -2

Query: 213 EEEIDYVRVLNGVLPKDIRVISWCPVPNDFHARFSCLSREYKYLFWRENLDLPAMEIAGK 34
           E EIDY+RVLN VLPKDIRV+ WCPVP  FHARFSCLSREYKY FWR NL++ AME AGK
Sbjct: 212 EGEIDYMRVLNRVLPKDIRVMGWCPVPIGFHARFSCLSREYKYFFWRGNLNILAMESAGK 271

Query: 33  KFVGEHDFRNF 1
           KFVGEHDFRNF
Sbjct: 272 KFVGEHDFRNF 282


>ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  125 bits (313), Expect = 5e-27
 Identities = 54/71 (76%), Positives = 61/71 (85%)
 Frame = -2

Query: 213 EEEIDYVRVLNGVLPKDIRVISWCPVPNDFHARFSCLSREYKYLFWRENLDLPAMEIAGK 34
           E EIDYV VLN VLP DIR++ WCP P DFHARFSCLSREYKY FW+ENL++PA+E+AG 
Sbjct: 175 EGEIDYVGVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIPAIEVAGN 234

Query: 33  KFVGEHDFRNF 1
           K VGEHDFRNF
Sbjct: 235 KLVGEHDFRNF 245


>ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/71 (77%), Positives = 60/71 (84%)
 Frame = -2

Query: 213 EEEIDYVRVLNGVLPKDIRVISWCPVPNDFHARFSCLSREYKYLFWRENLDLPAMEIAGK 34
           E EIDYVRVLN VLP DIR++ WCP P DFHARFSCLSREYKY FW+ENL++ AME AG 
Sbjct: 175 EGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQAMESAGN 234

Query: 33  KFVGEHDFRNF 1
           K VGEHDFRNF
Sbjct: 235 KLVGEHDFRNF 245


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