BLASTX nr result

ID: Cimicifuga21_contig00023046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023046
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu...    69   3e-10
ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...    67   2e-09
emb|CBI30650.3| unnamed protein product [Vitis vinifera]               67   2e-09
emb|CAN78274.1| hypothetical protein VITISV_037787 [Vitis vinifera]    67   2e-09
ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica...    66   3e-09

>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 696

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = +3

Query: 3   AVTAGFFANACRLEAFSQARMYTTIRSSQKVYIHPSSVLF 122
           AVTAGFFANACRLEAFS   MY T+R SQ+VYIHPSSVLF
Sbjct: 608 AVTAGFFANACRLEAFSHNGMYKTVRGSQEVYIHPSSVLF 647


>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis
           vinifera]
          Length = 695

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = +3

Query: 3   AVTAGFFANACRLEAFSQARMYTTIRSSQKVYIHPSSVLF 122
           AVTAGFFANAC LEA SQ  MY TIRS+Q+VYIHPSSVLF
Sbjct: 608 AVTAGFFANACCLEAHSQGGMYKTIRSAQEVYIHPSSVLF 647


>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = +3

Query: 3   AVTAGFFANACRLEAFSQARMYTTIRSSQKVYIHPSSVLF 122
           AVTAGFFANAC LEA SQ  MY TIRS+Q+VYIHPSSVLF
Sbjct: 607 AVTAGFFANACCLEAHSQGGMYKTIRSAQEVYIHPSSVLF 646


>emb|CAN78274.1| hypothetical protein VITISV_037787 [Vitis vinifera]
          Length = 235

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = +3

Query: 3   AVTAGFFANACRLEAFSQARMYTTIRSSQKVYIHPSSVLF 122
           AVTAGFFANAC LEA SQ  MY TIRS+Q+VYIHPSSVLF
Sbjct: 148 AVTAGFFANACCLEAHSQGGMYKTIRSAQEVYIHPSSVLF 187


>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus]
          Length = 696

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = +3

Query: 3   AVTAGFFANACRLEAFSQARMYTTIRSSQKVYIHPSSVLF 122
           AVTAGFFANAC++EA+S   MY T+R SQ+VYIHPSSVLF
Sbjct: 608 AVTAGFFANACQIEAYSHNGMYKTVRGSQEVYIHPSSVLF 647


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