BLASTX nr result

ID: Cimicifuga21_contig00023038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023038
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76673.1| hypothetical protein VITISV_011790 [Vitis vinifera]    91   8e-17
ref|XP_002272609.1| PREDICTED: uncharacterized protein LOC100258...    90   2e-16
ref|XP_002316042.1| predicted protein [Populus trichocarpa] gi|2...    76   4e-12
ref|XP_002523498.1| ATP binding protein, putative [Ricinus commu...    71   1e-10
ref|XP_002276238.2| PREDICTED: uncharacterized protein LOC100251...    69   3e-10

>emb|CAN76673.1| hypothetical protein VITISV_011790 [Vitis vinifera]
          Length = 1338

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
 Frame = -3

Query: 528 EESWKHYCNSLVYGFGHQTVAPETVGGESAQIGQ--EGGVS-------------LFSNDS 394
           EE+WK+YCNSL        +  +T    S++  Q  EGG+                 + +
Sbjct: 243 EETWKNYCNSLEQYRKQMXILNQTPVHHSSKPNQTEEGGLEHEKDGQEPVCKQGSIVSPT 302

Query: 393 TKGERRLDIPKGRAIQVDGGLGERRPSMDTRRPRNQDSDVVIQISIQDTMECXXXXSKEE 214
           +K   RL++PKGRAIQV+G  GER+PSMD RRPR++DS VVI I++QD+++       +E
Sbjct: 303 SKSTDRLELPKGRAIQVEGSTGERQPSMDVRRPRHRDSGVVIHIAVQDSVD-------DE 355

Query: 213 LGHSDNQLNASENGGSVMHVAQNAFSAESTDKCRSQCREAYVKDLGMRSLKRCSQPKSSS 34
           + + D+  + S   G              +      C E  V       LKR S+  ++S
Sbjct: 356 IDNIDSTEDESSENGDFKVGDNKDIHCYGSGNGNKPCLEKNVTLDRSSVLKRFSKXSTAS 415

Query: 33  NALPVDPD 10
           N + VD D
Sbjct: 416 NPVSVDSD 423


>ref|XP_002272609.1| PREDICTED: uncharacterized protein LOC100258583 [Vitis vinifera]
           gi|296083247|emb|CBI22883.3| unnamed protein product
           [Vitis vinifera]
          Length = 1300

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
 Frame = -3

Query: 528 EESWKHYCNSLVYGFGHQTVAPETVGGESAQIGQ--EGGVS-------------LFSNDS 394
           EE+WK+YCNSL        +  +T    S++  Q  EGG+                 + +
Sbjct: 243 EETWKNYCNSLEQYRKQMHILNQTPVHHSSKPNQTEEGGLEHEKDGQEPVCKQGSIVSPT 302

Query: 393 TKGERRLDIPKGRAIQVDGGLGERRPSMDTRRPRNQDSDVVIQISIQDTMECXXXXSKEE 214
           +K   RL++PKGRAIQV+G  GER+PSMD RRPR++DS VVI I++QD+++       +E
Sbjct: 303 SKSTDRLELPKGRAIQVEGSTGERQPSMDVRRPRHRDSGVVIHIAVQDSVD-------DE 355

Query: 213 LGHSDNQLNASENGGSVMHVAQNAFSAESTDKCRSQCREAYVKDLGMRSLKRCSQPKSSS 34
           + + D+  + S   G              +      C E  V       LKR S+  ++S
Sbjct: 356 IDNIDSTEDESSENGDFKVGDNKDIHCYGSGNGNKPCLEKNVTLDRSSVLKRFSKLSTAS 415

Query: 33  NALPVDPD 10
           N + VD D
Sbjct: 416 NPVSVDSD 423


>ref|XP_002316042.1| predicted protein [Populus trichocarpa] gi|222865082|gb|EEF02213.1|
           predicted protein [Populus trichocarpa]
          Length = 1253

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 17/193 (8%)
 Frame = -3

Query: 528 EESWKHYCNSLV------YGFGHQTVAPETVGGESAQIGQEGG----------VSLFSND 397
           E+SWK YC SL       Y  G  ++   +   ++ +   E            V   S  
Sbjct: 258 EDSWKQYCMSLEQYGQQSYMHGAMSILHSSKSTQAYEFRPEQNSIAIADHISQVDSSSEY 317

Query: 396 STKGERRLDIPKGRAIQVDGGLGERRPSMDTRRPRNQDSDVVIQISIQDTMECXXXXSKE 217
           + +G ++L + KGRAIQV+   GER+P+MD RRPR  DSDVVI+I++QD+ +     S E
Sbjct: 318 ADRGGKQLGLRKGRAIQVEDSTGERQPTMDLRRPRVWDSDVVIKINVQDSNDNSSQSSME 377

Query: 216 ELGHSD-NQLNASENGGSVMHVAQNAFSAESTDKCRSQCREAYVKDLGMRSLKRCSQPKS 40
           +  H D N+  AS+     +   ++A S+ S  +              +    RC Q  S
Sbjct: 378 QSSHIDSNEPGASKRRDLNVDDKRDACSSGSASRDEPSAE-------SLEGNLRCFQSMS 430

Query: 39  SSNALPVDPDGQE 1
            SN +  + D  E
Sbjct: 431 VSNKMSPNTDNYE 443


>ref|XP_002523498.1| ATP binding protein, putative [Ricinus communis]
           gi|223537205|gb|EEF38837.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1365

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 47/123 (38%), Positives = 62/123 (50%), Gaps = 27/123 (21%)
 Frame = -3

Query: 528 EESWKHYCNSL--------------VY--GFGHQTVAPETVGGESAQIGQE--------- 424
           EESWK YC  L              VY  G   Q   P+     +A  G           
Sbjct: 398 EESWKDYCKQLEQHRLETTMQSKIRVYESGRAEQEYDPDLPPELAAAAGMHDVPAENSNL 457

Query: 423 GGVSLFSNDSTKGERRL--DIPKGRAIQVDGGLGERRPSMDTRRPRNQDSDVVIQISIQD 250
           G   +  +D TKG  R+   +P GRAIQV+GG GER PS+DTR PR +D DV+I+I +QD
Sbjct: 458 GKSDVGQSDLTKGPARMRPPLPTGRAIQVEGGYGERLPSIDTRPPRTRDCDVIIEIVLQD 517

Query: 249 TME 241
           +++
Sbjct: 518 SLD 520


>ref|XP_002276238.2| PREDICTED: uncharacterized protein LOC100251960 [Vitis vinifera]
          Length = 1417

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 27/123 (21%)
 Frame = -3

Query: 528 EESWKHYCNSL--------------VYGFGH-----------QTVAPETVGGESAQIGQE 424
           EESWK YC  L              VY  G            +  A   +   SA+ G  
Sbjct: 444 EESWKQYCKQLEQLRLEATMQTKIRVYESGRTEQEYDPDLPPELAAAVGIHDVSAENGNL 503

Query: 423 GGVSLFSNDSTKGERRL--DIPKGRAIQVDGGLGERRPSMDTRRPRNQDSDVVIQISIQD 250
           G   +  +D  K   R+   IP GRAIQV+GG GER PS+DTR PR +DSD +I+I++Q 
Sbjct: 504 GRADVGPSDLAKASARVRPPIPTGRAIQVEGGCGERLPSVDTRPPRVRDSDAIIEITLQG 563

Query: 249 TME 241
           +++
Sbjct: 564 SLD 566


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