BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023033
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chlor...   555   e-156
ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplast...   543   e-152
ref|XP_003533113.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase s...   541   e-152
ref|XP_002526325.1| DNA gyrase subunit A, chloroplast/mitochondr...   540   e-151
ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplast...   536   e-150

>sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017093|gb|AAR07942.1| DNA gyrase A
            subunit [Nicotiana benthamiana]
          Length = 935

 Score =  555 bits (1430), Expect = e-156
 Identities = 272/301 (90%), Positives = 296/301 (98%), Gaps = 1/301 (0%)
 Frame = +1

Query: 1    LPDVRDGLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMA 180
            LPDVRDGLKPVHRRIL+AMHELGLSS+KPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMA
Sbjct: 116  LPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMA 175

Query: 181  QDFSLRWPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLADLDQDTVEFIPNFDNS 360
            QDFSLR PLIRGHGNFGSIDADPPAAMRYTECRLE LTE+MLLADL+Q+TV+F+PNFDNS
Sbjct: 176  QDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTESMLLADLEQNTVDFVPNFDNS 235

Query: 361  QKEPSLLPARVPNLLLNGSSGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYM 540
            QKEPSLLPARVPNLLLNG+SGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYM
Sbjct: 236  QKEPSLLPARVPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYM 295

Query: 541  PGPDFPTGGLIMGNAGILDAYRTGRGRIVVRGKTEVE-LDSKTKRSAIIIKEVPYQTNKA 717
            PGPDFPTGG+IMGN GIL+A+RTGRGR+V+RGKT++E LDSKTKR+AIII+E+PYQTNKA
Sbjct: 296  PGPDFPTGGIIMGNIGILEAFRTGRGRVVIRGKTDIELLDSKTKRAAIIIQEIPYQTNKA 355

Query: 718  ALVEKIADLVENKILEGISDIRDESDRSGMRVVIELKKGSDPAIVLNNLFRQTSLQSSFS 897
            +LVEKIADLVENKILEG+SDIRDESDRSGMR+VIELK+GSDPAIVLNNL+R T+LQSSFS
Sbjct: 356  SLVEKIADLVENKILEGVSDIRDESDRSGMRIVIELKRGSDPAIVLNNLYRLTALQSSFS 415

Query: 898  C 900
            C
Sbjct: 416  C 416


>ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 925

 Score =  543 bits (1400), Expect = e-152
 Identities = 268/301 (89%), Positives = 289/301 (96%), Gaps = 1/301 (0%)
 Frame = +1

Query: 1    LPDVRDGLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMA 180
            LPDVRDGLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMA
Sbjct: 106  LPDVRDGLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMA 165

Query: 181  QDFSLRWPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLADLDQDTVEFIPNFDNS 360
            QDFSLR PLI+GHGNFGS+DADPPAAMRYTECRLE LTEAMLLADL+QDTV+F+PNFDNS
Sbjct: 166  QDFSLRCPLIQGHGNFGSVDADPPAAMRYTECRLEALTEAMLLADLEQDTVDFLPNFDNS 225

Query: 361  QKEPSLLPARVPNLLLNGSSGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYM 540
            QKEPSLLPAR+P LLLNGSSGIAVGMATNIPPHN+GELVD L  LI NPEATLQELLEYM
Sbjct: 226  QKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNIGELVDVLCVLIRNPEATLQELLEYM 285

Query: 541  PGPDFPTGGLIMGNAGILDAYRTGRGRIVVRGKTEVE-LDSKTKRSAIIIKEVPYQTNKA 717
            PGPDFPTGGLIMGN GIL+AYRTGRGRI+VRGKTEVE LDSKTKR+A+IIKE+PYQTNK+
Sbjct: 286  PGPDFPTGGLIMGNIGILEAYRTGRGRIIVRGKTEVELLDSKTKRTAVIIKEIPYQTNKS 345

Query: 718  ALVEKIADLVENKILEGISDIRDESDRSGMRVVIELKKGSDPAIVLNNLFRQTSLQSSFS 897
            +LVEKIA+LVENK L+GISDIRDESDRSGMR+VIELK+GSDP+IVLN L+R T+LQSSFS
Sbjct: 346  SLVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSDPSIVLNKLYRLTALQSSFS 405

Query: 898  C 900
            C
Sbjct: 406  C 406


>ref|XP_003533113.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase subunit A,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 924

 Score =  541 bits (1395), Expect = e-152
 Identities = 265/301 (88%), Positives = 288/301 (95%), Gaps = 1/301 (0%)
 Frame = +1

Query: 1    LPDVRDGLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMA 180
            LPDVRDGLKPVHRRILFAMHELGLSS+KP+KKCARVVGEVLGKFHPHGDTAVYDSLVRMA
Sbjct: 106  LPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMA 165

Query: 181  QDFSLRWPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLADLDQDTVEFIPNFDNS 360
            QDFSLR PLI+GHGNFGSIDADPPAAMRYTECRL+ LTEAMLL DL+QDTV+F+PNFDNS
Sbjct: 166  QDFSLRSPLIQGHGNFGSIDADPPAAMRYTECRLDDLTEAMLLTDLEQDTVDFVPNFDNS 225

Query: 361  QKEPSLLPARVPNLLLNGSSGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYM 540
            QKEPSLLPAR+P LLLNGSSGIAVGMATNIPPHNLGE+VD L  LIHNPEATLQELLEYM
Sbjct: 226  QKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVLIHNPEATLQELLEYM 285

Query: 541  PGPDFPTGGLIMGNAGILDAYRTGRGRIVVRGKTEVE-LDSKTKRSAIIIKEVPYQTNKA 717
            PGPDFPTGGLIMGN GIL+AYRTGRGR+++RGKT++E LDSKTKR+AIIIKE+PYQTNKA
Sbjct: 286  PGPDFPTGGLIMGNLGILEAYRTGRGRVIIRGKTDIELLDSKTKRTAIIIKEIPYQTNKA 345

Query: 718  ALVEKIADLVENKILEGISDIRDESDRSGMRVVIELKKGSDPAIVLNNLFRQTSLQSSFS 897
             LVEKIA+LVENK L+GISDIRDESDRSGMR+VIELK+GSDP IVLNNL+R TSLQS+FS
Sbjct: 346  TLVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQSTFS 405

Query: 898  C 900
            C
Sbjct: 406  C 406


>ref|XP_002526325.1| DNA gyrase subunit A, chloroplast/mitochondrial precursor, putative
            [Ricinus communis] gi|223534352|gb|EEF36061.1| DNA gyrase
            subunit A, chloroplast/mitochondrial precursor, putative
            [Ricinus communis]
          Length = 540

 Score =  540 bits (1390), Expect = e-151
 Identities = 266/301 (88%), Positives = 290/301 (96%), Gaps = 1/301 (0%)
 Frame = +1

Query: 1    LPDVRDGLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMA 180
            LPDVRDGLKPVHRRILFAMHELGLSSRKP+KKCARVVGEVLGKFHPHGD+AVYD+LVRMA
Sbjct: 135  LPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDSAVYDALVRMA 194

Query: 181  QDFSLRWPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLADLDQDTVEFIPNFDNS 360
            QDFSLR PLI+GHGNFGSIDADPPAAMRYTECRLE LTEA+LLADL+ DTV+F+PNFD+S
Sbjct: 195  QDFSLRSPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAVLLADLELDTVDFVPNFDDS 254

Query: 361  QKEPSLLPARVPNLLLNGSSGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYM 540
            QKEPSLLPAR+P LLLNGSSGIAVGMATNIPPHNLGELVD L ALIHNPEATLQELLEYM
Sbjct: 255  QKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYM 314

Query: 541  PGPDFPTGGLIMGNAGILDAYRTGRGRIVVRGKTEVE-LDSKTKRSAIIIKEVPYQTNKA 717
            PGPDFPTGGLIMGN GIL+AYRTGRGRI+VRGKTEVE LDSKTKR+A+IIKE+PYQTNKA
Sbjct: 315  PGPDFPTGGLIMGNLGILEAYRTGRGRIIVRGKTEVESLDSKTKRTAVIIKEIPYQTNKA 374

Query: 718  ALVEKIADLVENKILEGISDIRDESDRSGMRVVIELKKGSDPAIVLNNLFRQTSLQSSFS 897
            +LVEKIA+LVENK L+G+SDIRDESDRSGMR+VIE+K+GSDP+IVLNNL+R T LQSSFS
Sbjct: 375  SLVEKIAELVENKNLDGVSDIRDESDRSGMRIVIEVKRGSDPSIVLNNLYRLTPLQSSFS 434

Query: 898  C 900
            C
Sbjct: 435  C 435


>ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 923

 Score =  536 bits (1380), Expect = e-150
 Identities = 264/301 (87%), Positives = 288/301 (95%), Gaps = 1/301 (0%)
 Frame = +1

Query: 1    LPDVRDGLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMA 180
            LPDVRDGLKPVHRRILFAMHELGLSSRKP+KKCARVVGEVLGKFHPHGD AVYDSLVRMA
Sbjct: 115  LPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMA 174

Query: 181  QDFSLRWPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLADLDQDTVEFIPNFDNS 360
            QDFSLR PLI+GHGNFGSIDADPPAAMRYTECRLE L+EAMLL+DL+ +TV+F+PNFDNS
Sbjct: 175  QDFSLRSPLIQGHGNFGSIDADPPAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNS 234

Query: 361  QKEPSLLPARVPNLLLNGSSGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYM 540
            QKEPSLLPAR+P LLLNGSSGIAVGMATNIPPHNLGE+VDAL  LIHNPEATLQELLEYM
Sbjct: 235  QKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDALCVLIHNPEATLQELLEYM 294

Query: 541  PGPDFPTGGLIMGNAGILDAYRTGRGRIVVRGKTEVE-LDSKTKRSAIIIKEVPYQTNKA 717
            PGPDFPTGGLIMGN GIL+AYRTGRGRI VRGKTEVE LDSKTKR+A+IIKE+PYQTNK+
Sbjct: 295  PGPDFPTGGLIMGNNGILEAYRTGRGRITVRGKTEVELLDSKTKRTAVIIKEIPYQTNKS 354

Query: 718  ALVEKIADLVENKILEGISDIRDESDRSGMRVVIELKKGSDPAIVLNNLFRQTSLQSSFS 897
            ALVE+IA+LVENK L+GISDIRDESDR+GMR+VIELK+G+DP+IV NNL+R TSLQSSFS
Sbjct: 355  ALVERIAELVENKTLDGISDIRDESDRTGMRIVIELKRGADPSIVQNNLYRLTSLQSSFS 414

Query: 898  C 900
            C
Sbjct: 415  C 415