BLASTX nr result

ID: Cimicifuga21_contig00022996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022996
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284070.1| PREDICTED: transmembrane protein 234 homolog...    84   9e-15
ref|XP_003530593.1| PREDICTED: transmembrane protein 234 homolog...    78   9e-13
ref|XP_003630751.1| hypothetical protein MTR_8g102920 [Medicago ...    76   3e-12
ref|NP_197458.1| uncharacterized protein [Arabidopsis thaliana] ...    72   5e-11
ref|XP_002325011.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10

>ref|XP_002284070.1| PREDICTED: transmembrane protein 234 homolog [Vitis vinifera]
           gi|297738785|emb|CBI28030.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/71 (57%), Positives = 50/71 (70%)
 Frame = +1

Query: 25  MGDAEKMIAIGLVWGITNAIMRRGALIWDKKLKSSATHKPHQPSQLHQRXXXXXXXXXXX 204
           +GD EKMIA+GLVWG TNAIMRRGALIWD+K++SS+  +  +PS LHQR           
Sbjct: 2   IGDIEKMIAVGLVWGSTNAIMRRGALIWDRKVRSSSA-QTTKPSTLHQRLLATYKNWLNL 60

Query: 205 XXIWQYSVPFL 237
              WQYS+PFL
Sbjct: 61  LLTWQYSIPFL 71


>ref|XP_003530593.1| PREDICTED: transmembrane protein 234 homolog [Glycine max]
          Length = 132

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/67 (58%), Positives = 45/67 (67%)
 Frame = +1

Query: 37  EKMIAIGLVWGITNAIMRRGALIWDKKLKSSATHKPHQPSQLHQRXXXXXXXXXXXXXIW 216
           EKMIA+G+VWG TNAIMRRGAL+WD+ LKSSA   PH  S L Q+             IW
Sbjct: 2   EKMIAVGIVWGATNAIMRRGALLWDEALKSSAKPNPH--STLCQKMRISLGNWVKLLSIW 59

Query: 217 QYSVPFL 237
           QYS+PFL
Sbjct: 60  QYSIPFL 66


>ref|XP_003630751.1| hypothetical protein MTR_8g102920 [Medicago truncatula]
           gi|355524773|gb|AET05227.1| hypothetical protein
           MTR_8g102920 [Medicago truncatula]
          Length = 133

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
 Frame = +1

Query: 37  EKMIAIGLVWGITNAIMRRGALIWDKKLKSSATHKPHQPS-QLHQRXXXXXXXXXXXXXI 213
           EKMIA+G+VWG TNA+MRRGAL+WD+ LKSS   +PH PS  L Q+             I
Sbjct: 2   EKMIAVGIVWGATNAVMRRGALLWDEALKSS--KQPHPPSTNLSQKISISLRNWLKLLSI 59

Query: 214 WQYSVPFL 237
           WQYS+PFL
Sbjct: 60  WQYSIPFL 67


>ref|NP_197458.1| uncharacterized protein [Arabidopsis thaliana]
           gi|15027867|gb|AAK76464.1| unknown protein [Arabidopsis
           thaliana] gi|19310721|gb|AAL85091.1| unknown protein
           [Arabidopsis thaliana] gi|332005343|gb|AED92726.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 137

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/69 (46%), Positives = 41/69 (59%)
 Frame = +1

Query: 31  DAEKMIAIGLVWGITNAIMRRGALIWDKKLKSSATHKPHQPSQLHQRXXXXXXXXXXXXX 210
           D +KM+A+GLVWG TNA++RRGAL WDK   SS T     P Q+ ++             
Sbjct: 4   DMDKMVAVGLVWGATNALIRRGALAWDKTKSSSTTESHSPPLQIRRKIMIALRDWINLLL 63

Query: 211 IWQYSVPFL 237
            WQYS+PFL
Sbjct: 64  FWQYSIPFL 72


>ref|XP_002325011.1| predicted protein [Populus trichocarpa] gi|222866445|gb|EEF03576.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
 Frame = +1

Query: 28  GDAEKMIAIGLVWGITNAIMRRGALIWD----KKLKSSATHKPHQPSQLHQRXXXXXXXX 195
           GD EKMI IGLVWG TNA++RRGAL+WD    K   SS++     P + HQ+        
Sbjct: 4   GDIEKMITIGLVWGATNALIRRGALLWDHQSLKSSSSSSSSSLSSPPKFHQKLLSSLKSW 63

Query: 196 XXXXXIWQYSVPFL 237
                 WQYS+PFL
Sbjct: 64  LSLLIFWQYSLPFL 77


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