BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022972
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|2...    68   2e-09
ref|XP_002521772.1| conserved hypothetical protein [Ricinus comm...    64   5e-08
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578...    60   9e-07
ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata sub...    59   2e-06
ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vit...    59   2e-06

>ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|222835655|gb|EEE74090.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
 Frame = -3

Query: 885 NPVTGQMLTLPPCTT----KRSECLDILHGMTFVDSTGEYKVVSLVVNKSRALRCEMLAL 718
           NPVT +++TLP  T     K S      +G      TG+YK+V L  ++   + CE L L
Sbjct: 196 NPVTRKLITLPLGTLCNYHKES------YGFALNHVTGDYKLVHLFRDEFEYVTCETLDL 249

Query: 717 GSNTWKSVSSPFGCLFRCYFRRHCSISIKRVLHFIYSGTFEADDEALRVINVVSFDTAEE 538
            + +W++V+ P   LF  +   H  +S    LH+I     + D+       +VS +   E
Sbjct: 250 ATRSWRAVNGPSFGLFNWF--GHAPVSAIGALHWIP----QLDNSDF----IVSMEVENE 299

Query: 537 IFYKSEVPYRCCSNRLERLHEIDGCPSVVVPNGVGRLCQWDIWALKDMYKGEWEKQYSV 361
            F+   +P+RC ++  +R+ E+ G    V    +      DIW LK + +G W KQYS+
Sbjct: 300 RFHCIPLPHRCTTH--DRVMEMGGLLCFVTHEDL----NIDIWNLKSVPEGIWTKQYSI 352


>ref|XP_002521772.1| conserved hypothetical protein [Ricinus communis]
           gi|223538985|gb|EEF40582.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 413

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 72/252 (28%), Positives = 110/252 (43%), Gaps = 6/252 (2%)
 Frame = -3

Query: 885 NPVTGQMLTLPPCTTKRSECLDILHGMTFVDSTGEYKVVSLVVNKSRALRCEMLALGSNT 706
           NPVT +++ LP  T    +  D  +G    D+TGEYKVV L  ++   + CE L L +  
Sbjct: 183 NPVTRKLIALPLGTIYSPQ--DESYGFALSDTTGEYKVVHLFRDELGYVSCETLNLRARF 240

Query: 705 WKSVSSPFGCLFRCYFRRHCSISIKRVLHFIYSGTFEADDEALRVINVVSFDTAEEIFYK 526
           WK V+ P   LFR +  R   ++    LH+I     + +D       +VS +   E F+ 
Sbjct: 241 WKEVNGPSFGLFRWFGYR--PVAALGALHWI--PQVDHND------YLVSMEVDNEKFHS 290

Query: 525 SEVPYRCCSNRLERLHEIDGCPSVVVPNGVGRLCQWDIWALKDMYKGEWEKQYSVDLTLL 346
             +P  C  +  +R+ E+ G    V    +      DIW L+ +    W KQYS+     
Sbjct: 291 VPLPKSCRIH--DRIIEMGGLLCFVTHEEL----NIDIWNLRSLSGDVWTKQYSIT---- 340

Query: 345 HDKYRQNCIFSCVVATLE-NGRFFFVECGGSAGIEYSVYDVQLQRLKSLGFAP-----HT 184
               R + I    + +L   G   F       G  YS YD +L+ ++ +         H 
Sbjct: 341 ----RGSIIDMVPICSLRIGGELIFKR--DEDGSFYS-YDCRLKEMRKVEMDKKCLPFHG 393

Query: 183 WYILLPHVESLV 148
            Y  LPHV SL+
Sbjct: 394 TY--LPHVNSLI 403


>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
           gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
           protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
           unknown protein [Arabidopsis thaliana]
           gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
           [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
           At3g07870 [Arabidopsis thaliana]
           gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
           thaliana]
          Length = 417

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 77/283 (27%), Positives = 113/283 (39%), Gaps = 38/283 (13%)
 Frame = -3

Query: 885 NPVTGQMLTLPPCTTKRSECLDILHGMTFVDSTGEYKVVSLVVNKS-------------- 748
           NP T   L LP C+ K  +  +++ G  F + T EYKV+ +V  +               
Sbjct: 142 NPFTTNSLELPECSNKYHD-QELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGR 200

Query: 747 ---RALRCEMLALGSNT------WKSV-SSPFGCLFRCYFRRHCSISIKRVLHFIYSGTF 598
              +    ++L L S T      W+S+  +P+      + +R     +   LHF+     
Sbjct: 201 IQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYK-----FVKRSSEALVNGRLHFVTRPRR 255

Query: 597 EADDEALRVINVVSFDTAEEIFYKSEVPYRCCS--NRL-ERLHEIDGCPSVVVPNGVGRL 427
              D        VSFD  +E F   E+P   C   NR   RL  + GC   VV    G+L
Sbjct: 256 HVPDR-----KFVSFDLEDEEF--KEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKL 308

Query: 426 CQWDIWALKDM-YKGEWEKQYSVDLTLLHDKYRQNCIFSC-VVATLENGRFFFVEC---G 262
              DIW +K    K  W K+YS+  T L    +QN      +    ENG+   V C    
Sbjct: 309 ---DIWVMKTYGVKESWGKEYSIG-TYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLEN 364

Query: 261 GSAGIEYS-----VYDVQLQRLKSLGF-APHTWYILLPHVESL 151
           G   +EY       YD +L + K L F     W+  + H  +L
Sbjct: 365 GEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHAGTL 407


>ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328394|gb|EFH58813.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 415

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 76/283 (26%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
 Frame = -3

Query: 885 NPVTGQMLTLPPCTTKRSECLDILHGMTFVDSTGEYKVVSLVVNKS-------------- 748
           NP T   L LP C+ K  +  +++ G  F + T +YKV+ +V  +               
Sbjct: 140 NPFTTNSLELPECSNKYHD-QELVFGFGFHEMTKDYKVLKIVYFRGSSSSNNGIYRGRGR 198

Query: 747 ---RALRCEMLALGSNT------WKSV-SSPFGCLFRCYFRRHCSISIKRVLHFIYSGTF 598
              +    ++L L S T      W+S+  +P+      + +R     +   LHF+     
Sbjct: 199 IQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYK-----FMKRSSEALVNGRLHFVTRPRR 253

Query: 597 EADDEALRVINVVSFDTAEEIFYKSEVPYRCCS--NRL-ERLHEIDGCPSVVVPNGVGRL 427
              D        VSFD  +E F   E+P   C   NR   RL  + GC   VV    G+L
Sbjct: 254 HVPDR-----KFVSFDLEDEEF--KEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKL 306

Query: 426 CQWDIWALKDM-YKGEWEKQYSVDLTLLHDKYRQNCIFSC-VVATLENGRFFFVEC---G 262
              DIW ++    K  W K+YS+  T L    +QN      +    ENG+   V C    
Sbjct: 307 ---DIWVMETYGVKESWGKEYSIG-TYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLEN 362

Query: 261 GSAGIEYS-----VYDVQLQRLKSLGF-APHTWYILLPHVESL 151
           G   +EY       YD +L + K L F     W+  + HV +L
Sbjct: 363 GEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHVGTL 405


>ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vitis vinifera]
          Length = 417

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 3/249 (1%)
 Frame = -3

Query: 885 NPVTGQMLTLPPCTTKRSECLDILHGMTFVDSTGEYKVVSLVVNKSRALRCEMLALGSNT 706
           NPVT ++  LP  T  +       +G     ST EYKVV L  ++ R + CE+L +G+ T
Sbjct: 185 NPVTRKLTELPLGTLSQPH--QESYGFALSYSTSEYKVVHLFHDELRYINCEILNVGTRT 242

Query: 705 WKSVSSP-FGCLFRCYFRRHCSISIKRVLHFIYSGTFEADDEALRVINVVSFDTAEEIFY 529
           W+ V+ P FG +    ++    +S    LH++       D++      +VS     E F+
Sbjct: 243 WRPVNGPSFGLISWFGYK---PVSAMGALHWV---PHINDND-----YIVSLHLENEKFH 291

Query: 528 KSEVPYRCCSNRLERLHE--IDGCPSVVVPNGVGRLCQWDIWALKDMYKGEWEKQYSVDL 355
             ++P      +  R H+  ++   S+   +    + Q  IW+LK +    W KQ+ +  
Sbjct: 292 TVQLP------KSYRTHDGIVEMGGSLCFVSHDEEMLQIGIWSLKGLSGEGWTKQHCITT 345

Query: 354 TLLHDKYRQNCIFSCVVATLENGRFFFVECGGSAGIEYSVYDVQLQRLKSLGFAPHTWYI 175
             + D      +FS  + T E   F   E G         YD QLQ ++ +         
Sbjct: 346 GCILDMVP---LFS--MRTTEEMVFKRDEDG-----SLYAYDFQLQVMRKIDMETPLSDC 395

Query: 174 LLPHVESLV 148
            LPHV SLV
Sbjct: 396 YLPHVNSLV 404