BLASTX nr result

ID: Cimicifuga21_contig00022971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022971
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521772.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vit...    58   7e-07
ref|XP_004171022.1| PREDICTED: F-box/kelch-repeat protein At3g23...    56   3e-06
ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23...    56   3e-06

>ref|XP_002521772.1| conserved hypothetical protein [Ricinus communis]
           gi|223538985|gb|EEF40582.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 413

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 51/162 (31%), Positives = 71/162 (43%)
 Frame = -3

Query: 495 NPVTGQILTLPRATERSECSDILHGMTFVDSTGEYKVVSFVINESNVLGCEMLALGSNTW 316
           NPVT +++ LP  T  S   D  +G    D+TGEYKVV    +E   + CE L L +  W
Sbjct: 183 NPVTRKLIALPLGTIYSP-QDESYGFALSDTTGEYKVVHLFRDELGYVSCETLNLRARFW 241

Query: 315 KSVSSPFGCLFGCLLTTHCLLSIEGVLHVIFTGIFEDDDREDMYVVSFDTAKESFYKSEL 136
           K V+ P   LF      +  ++  G LH I        D  D Y+VS +   E F+   L
Sbjct: 242 KEVNGPSFGLFRWF--GYRPVAALGALHWI-----PQVDHND-YLVSMEVDNEKFHSVPL 293

Query: 135 PYCCHKSEHLHEIDGFPSVVVPNERHEINRFFQWDIWCLKDM 10
           P  C   + + E+ G    V   E          DIW L+ +
Sbjct: 294 PKSCRIHDRIIEMGGLLCFVTHEE-------LNIDIWNLRSL 328


>ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|222835655|gb|EEE74090.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 48/165 (29%), Positives = 75/165 (45%)
 Frame = -3

Query: 495 NPVTGQILTLPRATERSECSDILHGMTFVDSTGEYKVVSFVINESNVLGCEMLALGSNTW 316
           NPVT +++TLP  T  +   +  +G      TG+YK+V    +E   + CE L L + +W
Sbjct: 196 NPVTRKLITLPLGTLCNYHKES-YGFALNHVTGDYKLVHLFRDEFEYVTCETLDLATRSW 254

Query: 315 KSVSSPFGCLFGCLLTTHCLLSIEGVLHVIFTGIFEDDDREDMYVVSFDTAKESFYKSEL 136
           ++V+ P   LF      H  +S  G LH I        D  D ++VS +   E F+   L
Sbjct: 255 RAVNGPSFGLFNWF--GHAPVSAIGALHWI-----PQLDNSD-FIVSMEVENERFHCIPL 306

Query: 135 PYCCHKSEHLHEIDGFPSVVVPNERHEINRFFQWDIWCLKDMYKG 1
           P+ C   + + E+ G    V   +          DIW LK + +G
Sbjct: 307 PHRCTTHDRVMEMGGLLCFVTHED-------LNIDIWNLKSVPEG 344


>ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vitis vinifera]
          Length = 417

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
 Frame = -3

Query: 495 NPVTGQILTLPRATERSECSDILHGMTFVDSTGEYKVVSFVINESNVLGCEMLALGSNTW 316
           NPVT ++  LP  T  S+     +G     ST EYKVV    +E   + CE+L +G+ TW
Sbjct: 185 NPVTRKLTELPLGT-LSQPHQESYGFALSYSTSEYKVVHLFHDELRYINCEILNVGTRTW 243

Query: 315 KSVSSP-FGCL--FGCLLTTHCLLSIEGVLHVIFTGIFEDDDREDMYVVSFDTAKESFYK 145
           + V+ P FG +  FG     +  +S  G LH  +     D+D    Y+VS     E F+ 
Sbjct: 244 RPVNGPSFGLISWFG-----YKPVSAMGALH--WVPHINDND----YIVSLHLENEKFHT 292

Query: 144 SELPYCCHKSEHLHEIDGFPSVVVPNERHEINRFFQWDIWCLKDM 10
            +LP      + + E+ G    V  +E        Q  IW LK +
Sbjct: 293 VQLPKSYRTHDGIVEMGGSLCFVSHDE-----EMLQIGIWSLKGL 332


>ref|XP_004171022.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis
           sativus]
          Length = 390

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 46/162 (28%), Positives = 69/162 (42%)
 Frame = -3

Query: 495 NPVTGQILTLPRATERSECSDILHGMTFVDSTGEYKVVSFVINESNVLGCEMLALGSNTW 316
           NPVT ++  LP  T  S  ++  +G  + + +G YKVV    +    + CE+  LG+  W
Sbjct: 177 NPVTRKLTALPPGTLNSSHNES-YGFAYDNVSGRYKVVHLFRDALMYISCEIFILGTENW 235

Query: 315 KSVSSPFGCLFGCLLTTHCLLSIEGVLHVIFTGIFEDDDREDMYVVSFDTAKESFYKSEL 136
           ++V  P   LFG     +  +   G LH I      D       + S +   E F    L
Sbjct: 236 RAVDGPPFGLFGWF--GYKPVEAIGALHWIPQVNHSD------CIASLEIENEKFQTIPL 287

Query: 135 PYCCHKSEHLHEIDGFPSVVVPNERHEINRFFQWDIWCLKDM 10
           P  C++ + + EI    S V   E H        DIW LK +
Sbjct: 288 PNSCNRYDGIVEIGSSLSYVTHMETHT-------DIWILKGL 322


>ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis
           sativus]
          Length = 401

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 46/162 (28%), Positives = 69/162 (42%)
 Frame = -3

Query: 495 NPVTGQILTLPRATERSECSDILHGMTFVDSTGEYKVVSFVINESNVLGCEMLALGSNTW 316
           NPVT ++  LP  T  S  ++  +G  + + +G YKVV    +    + CE+  LG+  W
Sbjct: 177 NPVTRKLTALPPGTLNSSHNES-YGFAYDNISGRYKVVHLFRDALMYISCEIFILGTENW 235

Query: 315 KSVSSPFGCLFGCLLTTHCLLSIEGVLHVIFTGIFEDDDREDMYVVSFDTAKESFYKSEL 136
           ++V  P   LFG     +  +   G LH I      D       + S +   E F    L
Sbjct: 236 RAVDGPPFGLFGWF--GYKPVEAIGALHWIPQVNHSD------CIASLEIENEKFQTIPL 287

Query: 135 PYCCHKSEHLHEIDGFPSVVVPNERHEINRFFQWDIWCLKDM 10
           P  C++ + + EI    S V   E H        DIW LK +
Sbjct: 288 PNSCNRYDGIVEIGSSLSYVTHMETHT-------DIWILKGL 322


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