BLASTX nr result

ID: Cimicifuga21_contig00022951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022951
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloropla...   100   2e-19
ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putat...   100   2e-19
ref|XP_004155151.1| PREDICTED: ALBINO3-like protein 2, chloropla...    94   1e-17
ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochond...    94   1e-17
ref|XP_002329007.1| inner membrane protein [Populus trichocarpa]...    90   2e-16

>ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloroplastic [Vitis vinifera]
           gi|297735304|emb|CBI17666.3| unnamed protein product
           [Vitis vinifera]
          Length = 572

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/62 (74%), Positives = 52/62 (83%)
 Frame = -1

Query: 248 MSMDHHPGFDCGGMLWFQNLTETPHGVLGAIFPILIAGLHFINVQISFQMARGGKVTGLL 69
           MS+DHHPGFD GG LWFQNLTE P+GVLG IFPILI+GLHFINVQISF  +  G+V GLL
Sbjct: 214 MSLDHHPGFDSGGALWFQNLTEFPNGVLGPIFPILISGLHFINVQISFSTSSVGQVPGLL 273

Query: 68  SM 63
            +
Sbjct: 274 GL 275


>ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
           gi|223548578|gb|EEF50069.1| cytochrome oxidase
           biogenesis protein, putative [Ricinus communis]
          Length = 548

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/82 (57%), Positives = 56/82 (68%)
 Frame = -1

Query: 248 MSMDHHPGFDCGGMLWFQNLTETPHGVLGAIFPILIAGLHFINVQISFQMARGGKVTGLL 69
           MS+DHHPGFDCGG LWFQNLTE PHG+ G IFP+LIA LH+IN+Q++F+     K TGLL
Sbjct: 213 MSLDHHPGFDCGGTLWFQNLTEYPHGIAGPIFPLLIACLHYINIQLAFEKFSVQKTTGLL 272

Query: 68  SMXXXXXXXXXXXXXLPLCLIG 3
           S+             LPL  IG
Sbjct: 273 SLLAKYYKLYLDLLTLPLFFIG 294


>ref|XP_004155151.1| PREDICTED: ALBINO3-like protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 366

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 45/82 (54%), Positives = 54/82 (65%)
 Frame = -1

Query: 248 MSMDHHPGFDCGGMLWFQNLTETPHGVLGAIFPILIAGLHFINVQISFQMARGGKVTGLL 69
           MS+DH+PGFD GG LWFQNLTE PHGV G IFP LIA LHFINVQ+SF+ +   K TG++
Sbjct: 29  MSLDHYPGFDYGGALWFQNLTEYPHGVFGPIFPFLIASLHFINVQLSFRKSSLEKETGII 88

Query: 68  SMXXXXXXXXXXXXXLPLCLIG 3
            +             +PL  IG
Sbjct: 89  GILAKYYKLYLNLLTVPLFFIG 110


>ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochondrial-like [Cucumis
           sativus]
          Length = 573

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 45/82 (54%), Positives = 54/82 (65%)
 Frame = -1

Query: 248 MSMDHHPGFDCGGMLWFQNLTETPHGVLGAIFPILIAGLHFINVQISFQMARGGKVTGLL 69
           MS+DH+PGFD GG LWFQNLTE PHGV G IFP LIA LHFINVQ+SF+ +   K TG++
Sbjct: 236 MSLDHYPGFDYGGALWFQNLTEYPHGVFGPIFPFLIASLHFINVQLSFRKSSLEKETGII 295

Query: 68  SMXXXXXXXXXXXXXLPLCLIG 3
            +             +PL  IG
Sbjct: 296 GILAKYYKLYLNLLTVPLFFIG 317


>ref|XP_002329007.1| inner membrane protein [Populus trichocarpa]
           gi|222839241|gb|EEE77592.1| inner membrane protein
           [Populus trichocarpa]
          Length = 257

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/82 (51%), Positives = 53/82 (64%)
 Frame = -1

Query: 248 MSMDHHPGFDCGGMLWFQNLTETPHGVLGAIFPILIAGLHFINVQISFQMARGGKVTGLL 69
           MS+++HPGFDCGG LWFQNLTE PHG L  IFP+L+AGLH++NVQ+SF  +      GLL
Sbjct: 7   MSLNNHPGFDCGGTLWFQNLTEFPHGGLAFIFPLLVAGLHYVNVQLSFDRSSIQNTGGLL 66

Query: 68  SMXXXXXXXXXXXXXLPLCLIG 3
            +             LP+  IG
Sbjct: 67  GLLSKYYKYYLIFLTLPMFFIG 88


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