BLASTX nr result

ID: Cimicifuga21_contig00022935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022935
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529445.1| esophageal cancer associated protein, putati...    55   6e-06
ref|XP_002277652.2| PREDICTED: UPF0505 protein C16orf62 homolog ...    55   8e-06
emb|CBI26668.3| unnamed protein product [Vitis vinifera]               55   8e-06
emb|CAN66283.1| hypothetical protein VITISV_003049 [Vitis vinifera]    55   8e-06

>ref|XP_002529445.1| esophageal cancer associated protein, putative [Ricinus communis]
            gi|223531061|gb|EEF32911.1| esophageal cancer associated
            protein, putative [Ricinus communis]
          Length = 925

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = -1

Query: 433  CILSSFKASIEISQICSKLIEIAKSCLNPNDNYLRSTMRFLDKH 302
            CI  SFK S +I Q+C KLIE A+ CL+ ND +L+ST+++LD+H
Sbjct: 870  CIALSFKVSEDILQVCWKLIETAELCLSTNDRFLQSTIKYLDEH 913


>ref|XP_002277652.2| PREDICTED: UPF0505 protein C16orf62 homolog [Vitis vinifera]
          Length = 920

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -1

Query: 433 CILSSFKASIEISQICSKLIEIAKSCLNPNDNYLRSTMRFL 311
           CI SSFK S EIS ICSKL+E A+ CL+ N+ YL+STM+ L
Sbjct: 864 CIASSFKVSPEISPICSKLMETAQLCLSSNNKYLQSTMKLL 904


>emb|CBI26668.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -1

Query: 433 CILSSFKASIEISQICSKLIEIAKSCLNPNDNYLRSTMRFL 311
           CI SSFK S EIS ICSKL+E A+ CL+ N+ YL+STM+ L
Sbjct: 754 CIASSFKVSPEISPICSKLMETAQLCLSSNNKYLQSTMKLL 794


>emb|CAN66283.1| hypothetical protein VITISV_003049 [Vitis vinifera]
          Length = 510

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -1

Query: 433 CILSSFKASIEISQICSKLIEIAKSCLNPNDNYLRSTMRFL 311
           CI SSFK S EIS ICSKL+E A+ CL+ N+ YL+STM+ L
Sbjct: 454 CIASSFKVSPEISPICSKLMETAQLCLSSNNKYLQSTMKLL 494


Top