BLASTX nr result

ID: Cimicifuga21_contig00022924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022924
         (1418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556100.1| PREDICTED: F-box/LRR-repeat protein At3g4888...    79   4e-12
ref|XP_002510806.1| conserved hypothetical protein [Ricinus comm...    79   4e-12
gb|EEC67261.1| hypothetical protein OsI_34223 [Oryza sativa Indi...    78   6e-12
gb|ACJ85472.1| unknown [Medicago truncatula]                           78   6e-12
ref|NP_001064994.1| Os10g0502900 [Oryza sativa Japonica Group] g...    77   8e-12

>ref|XP_003556100.1| PREDICTED: F-box/LRR-repeat protein At3g48880-like [Glycine max]
          Length = 305

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 82/292 (28%), Positives = 134/292 (45%), Gaps = 17/292 (5%)
 Frame = +2

Query: 167 WSYLPYDLLLNIFKRLDHKEVFWAISSVCRFWQIACWDVLFWQGDMLDLGDLRSLCDTDD 346
           W  L  D+L+ IF+ LD  E+   IS VC  W++AC D L W+   LDL  LRS      
Sbjct: 11  WEDLDIDILVKIFQLLDIFELTSGISRVCSAWRMACCDPLLWK--TLDLSMLRSNFIKIP 68

Query: 347 VE----VEDKFDKMGLALTRVMK-SLFDYHGNILEDVPRKSYRMTFPLIQASDKHLVYVA 511
           +E    V+ + D+    LTR++K SL     +I+  +   +       +  SD+ L Y A
Sbjct: 69  LEPFVYVDGRSDR---TLTRILKISLSLSQQSIMTLIFHFN-------LYVSDEQLTYTA 118

Query: 512 ERTAKLQYILL-NMDGITGKGFSRAIRNWRELEVIGMASPGDHHYTHFIQEIGINCCILK 688
           ER  +L+ ++L   + I   G  +AIR W+ELE + M S  +  Y   ++EI  +C    
Sbjct: 119 ERCPQLRRLVLPAWNRIKKPGMCKAIRGWKELESLTMPSIANPPY--ILEEISTHCKNFS 176

Query: 689 ILTIHSSSVLDKSWFRLDEYNSQVMANNLPSLRGLLLSNCYIHKFGLQTIMSKCRQLVMF 868
            L I             D + +  +A  LP LR L L    ++K  L  I+   + L + 
Sbjct: 177 ELKIMGP---------CDIFFASSLAAFLPKLRILSLRCSMLYKDVLILILDNLQHLEVL 227

Query: 869 ELSTC-----------RRVTEEAKLTRHRRALDPKDSGVIPEPLSVMLEKSK 991
            +S C           +R+ +E  +T  ++A   ++     E   VM ++++
Sbjct: 228 NISHCVLMEALPAPQQKRIIKEIDVTIRQKASRLREFLTCMEDSCVMCQRTR 279


>ref|XP_002510806.1| conserved hypothetical protein [Ricinus communis]
           gi|223549921|gb|EEF51408.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 76/245 (31%), Positives = 113/245 (46%), Gaps = 6/245 (2%)
 Frame = +2

Query: 167 WSYLPYDLLLNIFKRLDHKEVFWAISSVCRFWQIACWDVLFWQGDMLDLGDLRSLCDTDD 346
           W  L  D+L+ IF+  D  ++   I+ VC  W++AC D L W+   LDL  L+S      
Sbjct: 22  WEDLDTDILVKIFQSFDIFQLTSGIAHVCSSWRLACCDPLLWK--TLDLSMLKSNFIKIP 79

Query: 347 VE----VEDKFDKMGLALTRVMK-SLFDYHGNILEDVPRKSYRMTFPLIQASDKHLVYVA 511
           +E    V+ + DK    LTRV+K SL    GNI   +   +       +  SD+ L Y A
Sbjct: 80  LEPYVYVDGRSDK---TLTRVLKISLNLSQGNITSLIFHFN-------LYVSDEQLTYTA 129

Query: 512 ERTAKLQYILL-NMDGITGKGFSRAIRNWRELEVIGMASPGDHHYTHFIQEIGINCCILK 688
           ER  +L+ ++L   + I   G  +AIR WR+LE + M S  +  Y   I+EI  NC    
Sbjct: 130 ERCPRLRRLVLPAWNRIKKTGICKAIRMWRDLESLTMPSIANPPY--LIEEIANNCRNFS 187

Query: 689 ILTIHSSSVLDKSWFRLDEYNSQVMANNLPSLRGLLLSNCYIHKFGLQTIMSKCRQLVMF 868
            L I             + + +  +A  LP LR L L    + K  L  I+   + L + 
Sbjct: 188 ELKIMGP---------FEIFFASTLAAYLPKLRVLSLRCSMLIKDALILILDSLQSLEVL 238

Query: 869 ELSTC 883
            +S C
Sbjct: 239 NISHC 243


>gb|EEC67261.1| hypothetical protein OsI_34223 [Oryza sativa Indica Group]
          Length = 321

 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 5/244 (2%)
 Frame = +2

Query: 167 WSYLPYDLLLNIFKRLDHKEVFWAISSVCRFWQIACWDVLFWQGDMLDLGDLRS----LC 334
           W  +  D+L+ IFK L+  E+   +S VCR W++AC D L W    LD G L+S      
Sbjct: 11  WEDMDTDVLVKIFKELNLVELS-PVSQVCRLWRLACSDPLIW--STLDFGLLKSNYIQTR 67

Query: 335 DTDDVEVEDKFDKMGLALTRVMKSLFDYHGNILEDVPRKSYRMTFPLIQASDKHLVYVAE 514
            +  + V+D+ DK    + RV  S+   +GN+       S  +    +   D+HL Y++E
Sbjct: 68  ASPYIWVDDRSDKRLSRILRVAMSI--SYGNV-------SCLIFHYNLYMKDEHLHYISE 118

Query: 515 RTAKLQYILL-NMDGITGKGFSRAIRNWRELEVIGMASPGDHHYTHFIQEIGINCCILKI 691
           R+  L+ +++   + IT  G  +AI+ W ELE + M + G  H  + ++EI  +C     
Sbjct: 119 RSPHLKRLVMPAWNRITKFGICQAIQRWEELESLTMPTIG--HPPYIMEEIARSCKNFAE 176

Query: 692 LTIHSSSVLDKSWFRLDEYNSQVMANNLPSLRGLLLSNCYIHKFGLQTIMSKCRQLVMFE 871
           L +  S          D+  +  +A +LP L+ L L    +    L  ++     L +  
Sbjct: 177 LKVMGS---------FDDLFASAIATHLPKLKVLSLRCSKVTMSALLWLLDNMANLEVLN 227

Query: 872 LSTC 883
           +S C
Sbjct: 228 ISHC 231


>gb|ACJ85472.1| unknown [Medicago truncatula]
          Length = 305

 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 80/269 (29%), Positives = 125/269 (46%), Gaps = 7/269 (2%)
 Frame = +2

Query: 167 WSYLPYDLLLNIFKRLDHKEVFWAISSVCRFWQIACWDVLFWQGDMLDLGDLRSLCDTDD 346
           W  L  D+L+ IF+ LD  E+   I+ VC  W++ C D L W+   LDL  LRS      
Sbjct: 11  WEDLDTDILVKIFQLLDIFELTSGIAHVCSAWRMTCCDPLLWK--TLDLSMLRSNFIKIP 68

Query: 347 VE----VEDKFDKMGLALTRVMKSLFDYHGNILEDVPRKS-YRMTFPL-IQASDKHLVYV 508
           +E    V+++ DK    LTR++K        I  ++ R S   + F   +  SD  L Y 
Sbjct: 69  LEPFVYVDERSDK---KLTRLLK--------ISLNLSRMSIVTLIFHFNLYVSDDQLTYT 117

Query: 509 AERTAKLQYILL-NMDGITGKGFSRAIRNWRELEVIGMASPGDHHYTHFIQEIGINCCIL 685
           AER   L+ ++L   + I   G  +AIR W+ELE + M S  +  Y  F++EI  NC   
Sbjct: 118 AERCPHLKRLVLPAWNRIKRTGMCKAIRCWKELESLTMPSIANPPY--FLEEIATNCKNF 175

Query: 686 KILTIHSSSVLDKSWFRLDEYNSQVMANNLPSLRGLLLSNCYIHKFGLQTIMSKCRQLVM 865
             L I             D + +  +A  +P LR L L    +++  L  I+     L +
Sbjct: 176 SELKIMGP---------CDIFFASTLAAFVPKLRFLSLRCSTLYRDVLILILDSLEHLEV 226

Query: 866 FELSTCRRVTEEAKLTRHRRALDPKDSGV 952
           F +S C  + E     +H++ ++  DS +
Sbjct: 227 FNISHC-ILMECLPPPQHKKIINEIDSTI 254


>ref|NP_001064994.1| Os10g0502900 [Oryza sativa Japonica Group]
           gi|78708871|gb|ABB47846.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113639603|dbj|BAF26908.1| Os10g0502900 [Oryza sativa
           Japonica Group] gi|125575319|gb|EAZ16603.1| hypothetical
           protein OsJ_32075 [Oryza sativa Japonica Group]
           gi|215700973|dbj|BAG92397.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 321

 Score = 77.4 bits (189), Expect = 8e-12
 Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 5/244 (2%)
 Frame = +2

Query: 167 WSYLPYDLLLNIFKRLDHKEVFWAISSVCRFWQIACWDVLFWQGDMLDLGDLRS----LC 334
           W  +  D+L+ IFK L+  E+   +S VCR W +AC D L W    LD G L+S      
Sbjct: 11  WEDMDTDVLVKIFKELNLVELS-PVSQVCRLWHLACSDPLIW--STLDFGLLKSNYIQTR 67

Query: 335 DTDDVEVEDKFDKMGLALTRVMKSLFDYHGNILEDVPRKSYRMTFPLIQASDKHLVYVAE 514
            +  + V+D+ DK    + RV  S+   +GN+       S  +    +   D+HL Y++E
Sbjct: 68  ASPYIWVDDRSDKRLSRILRVAMSI--SYGNV-------SCLIFHYNLYMKDEHLHYISE 118

Query: 515 RTAKLQYILL-NMDGITGKGFSRAIRNWRELEVIGMASPGDHHYTHFIQEIGINCCILKI 691
           R+  L+ +++   + IT  G  +AI+ W ELE + M + G  H  + ++EI  +C     
Sbjct: 119 RSPHLKRLVMPAWNRITKFGICQAIQRWEELESLTMPTIG--HPPYIMEEIARSCKNFAE 176

Query: 692 LTIHSSSVLDKSWFRLDEYNSQVMANNLPSLRGLLLSNCYIHKFGLQTIMSKCRQLVMFE 871
           L +  S          D+  +  +A +LP L+ L L    +    L  ++     L +  
Sbjct: 177 LKVMGS---------FDDLFASAIATHLPKLKVLSLRCSKVTMSALLWLLDNMANLEVLN 227

Query: 872 LSTC 883
           +S C
Sbjct: 228 ISHC 231


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