BLASTX nr result

ID: Cimicifuga21_contig00022901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022901
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544931.1| PREDICTED: transcription factor RF2b [Glycin...   139   5e-31
ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis ...   137   2e-30
ref|XP_002266792.1| PREDICTED: transcription factor RF2b-like [V...   136   4e-30
ref|XP_002518293.1| Transcription factor RF2b, putative [Ricinus...   136   4e-30
emb|CBI15815.3| unnamed protein product [Vitis vinifera]              136   4e-30

>ref|XP_003544931.1| PREDICTED: transcription factor RF2b [Glycine max]
          Length = 362

 Score =  139 bits (350), Expect = 5e-31
 Identities = 70/117 (59%), Positives = 87/117 (74%)
 Frame = -2

Query: 669 EQQAQLRDALNEALKQEVERLKIATGEAVSHSEAFNMGMHYMPYSSSSIFSLPQQPGPGG 490
           EQQAQLRDALNEALK+EVERLK+ATGE +SH+++FN+GMH MP+S S+   +P Q GP G
Sbjct: 233 EQQAQLRDALNEALKKEVERLKVATGEMMSHTDSFNLGMHLMPFSGSNFVPIPPQSGPSG 292

Query: 489 HHNMQFSQFHPSQSNMMNHTQQGTNSHTYSEMSQQDPLGRFQGLDINTNNRESHLVK 319
           H NMQ   F  + S M +H    T+SH YSE+ Q D LGRFQGLDI  +++ S LVK
Sbjct: 293 HQNMQMPPFGLTPSTMPSHLLHQTSSHPYSEILQNDQLGRFQGLDI--SSKGSTLVK 347


>ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis vinifera]
          Length = 359

 Score =  137 bits (345), Expect = 2e-30
 Identities = 72/120 (60%), Positives = 88/120 (73%), Gaps = 3/120 (2%)
 Frame = -2

Query: 669 EQQAQLRDALNEALKQEVERLKIATGEAVSHSEAFNMGMHYMPYSSSSIFSLPQQPGPGG 490
           EQQAQLRDALNEALK+EVERLKIATGE ++ S+A+N+GMH++PY+ SS FS   QPGP  
Sbjct: 227 EQQAQLRDALNEALKKEVERLKIATGEIMTSSDAYNLGMHHVPYTQSSFFSHQSQPGPSE 286

Query: 489 HHNMQFSQFHPSQSNMMNHTQQ---GTNSHTYSEMSQQDPLGRFQGLDINTNNRESHLVK 319
             N+Q  QFHP  SNM+ H Q      +S+  S+M QQDPLGR QGLDI  ++R   LVK
Sbjct: 287 SQNIQMPQFHPFPSNMLTHHQPLLGAAHSNALSDMLQQDPLGRLQGLDI--SSRGPSLVK 344


>ref|XP_002266792.1| PREDICTED: transcription factor RF2b-like [Vitis vinifera]
          Length = 344

 Score =  136 bits (342), Expect = 4e-30
 Identities = 75/117 (64%), Positives = 83/117 (70%)
 Frame = -2

Query: 669 EQQAQLRDALNEALKQEVERLKIATGEAVSHSEAFNMGMHYMPYSSSSIFSLPQQPGPGG 490
           EQQAQLRDALN ALKQEVERLKIATGE +S SE+F++GM  M Y+ SS  SLPQQ GP G
Sbjct: 215 EQQAQLRDALNTALKQEVERLKIATGEIMSPSESFDLGMQQMLYTPSSFLSLPQQIGPAG 274

Query: 489 HHNMQFSQFHPSQSNMMNHTQQGTNSHTYSEMSQQDPLGRFQGLDINTNNRESHLVK 319
             NMQ   FH S SNM     Q  NS   SE+ Q DPLGR QGLDI  ++R SHLVK
Sbjct: 275 QPNMQLPPFHHSHSNMSTQYLQPINSQPISEILQNDPLGRLQGLDI--SSRGSHLVK 329


>ref|XP_002518293.1| Transcription factor RF2b, putative [Ricinus communis]
           gi|223542513|gb|EEF44053.1| Transcription factor RF2b,
           putative [Ricinus communis]
          Length = 386

 Score =  136 bits (342), Expect = 4e-30
 Identities = 68/108 (62%), Positives = 82/108 (75%)
 Frame = -2

Query: 669 EQQAQLRDALNEALKQEVERLKIATGEAVSHSEAFNMGMHYMPYSSSSIFSLPQQPGPGG 490
           EQQAQLRDALNEALK+EVERLKIAT E +S SE+FN+GMH MPY+ S+ FS PQQ G   
Sbjct: 257 EQQAQLRDALNEALKKEVERLKIATREIMSPSESFNLGMHQMPYTPSNFFSHPQQSGSAN 316

Query: 489 HHNMQFSQFHPSQSNMMNHTQQGTNSHTYSEMSQQDPLGRFQGLDINT 346
           H NMQF  +  SQ+++  H    TNSHT+SE+ Q D LGR QGLDI++
Sbjct: 317 HPNMQFPPYAHSQTSIPGHHLHQTNSHTFSELMQNDSLGRLQGLDISS 364


>emb|CBI15815.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score =  136 bits (342), Expect = 4e-30
 Identities = 75/117 (64%), Positives = 83/117 (70%)
 Frame = -2

Query: 669 EQQAQLRDALNEALKQEVERLKIATGEAVSHSEAFNMGMHYMPYSSSSIFSLPQQPGPGG 490
           EQQAQLRDALN ALKQEVERLKIATGE +S SE+F++GM  M Y+ SS  SLPQQ GP G
Sbjct: 90  EQQAQLRDALNTALKQEVERLKIATGEIMSPSESFDLGMQQMLYTPSSFLSLPQQIGPAG 149

Query: 489 HHNMQFSQFHPSQSNMMNHTQQGTNSHTYSEMSQQDPLGRFQGLDINTNNRESHLVK 319
             NMQ   FH S SNM     Q  NS   SE+ Q DPLGR QGLDI  ++R SHLVK
Sbjct: 150 QPNMQLPPFHHSHSNMSTQYLQPINSQPISEILQNDPLGRLQGLDI--SSRGSHLVK 204


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