BLASTX nr result

ID: Cimicifuga21_contig00022895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022895
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308470.1| ABC transporter family, retinal flippase sub...   147   9e-34
emb|CBI30307.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...   145   3e-33
ref|XP_002530326.1| abc transporter, putative [Ricinus communis]...   144   1e-32
ref|XP_003537071.1| PREDICTED: ABC transporter B family member 2...   142   4e-32

>ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus
           trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter
           family, retinal flippase subfamily [Populus trichocarpa]
          Length = 570

 Score =  147 bits (371), Expect = 9e-34
 Identities = 75/86 (87%), Positives = 82/86 (95%)
 Frame = -3

Query: 260 RTANADEFISKLSEGYDTNIGPRGSILSGGQKQRLAIARAIYQNSSLLILDEATSALDSK 81
           +TANADEFI KL +GY TNIGPRGS LSGGQKQRLAIARA+YQ+SS+LILDEATSALDS+
Sbjct: 447 QTANADEFIRKLPKGYQTNIGPRGSSLSGGQKQRLAIARALYQDSSILILDEATSALDSR 506

Query: 80  SEMLVRQAVERLMENHTVLVIAHRLE 3
           SE+LVRQAVERLMENHTVLVIAHRLE
Sbjct: 507 SELLVRQAVERLMENHTVLVIAHRLE 532


>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  145 bits (366), Expect = 3e-33
 Identities = 74/86 (86%), Positives = 80/86 (93%)
 Frame = -3

Query: 260 RTANADEFISKLSEGYDTNIGPRGSILSGGQKQRLAIARAIYQNSSLLILDEATSALDSK 81
           +TANADEFI  LSEGY TNIGPRGS LSGGQKQR+AIARA+YQN S+LILDEATSALDS+
Sbjct: 600 QTANADEFIRNLSEGYQTNIGPRGSTLSGGQKQRIAIARALYQNCSILILDEATSALDSR 659

Query: 80  SEMLVRQAVERLMENHTVLVIAHRLE 3
           SE+LVRQAVERLMEN TVLVIAHRLE
Sbjct: 660 SELLVRQAVERLMENRTVLVIAHRLE 685


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score =  145 bits (366), Expect = 3e-33
 Identities = 74/86 (86%), Positives = 80/86 (93%)
 Frame = -3

Query: 260 RTANADEFISKLSEGYDTNIGPRGSILSGGQKQRLAIARAIYQNSSLLILDEATSALDSK 81
           +TANADEFI  LSEGY TNIGPRGS LSGGQKQR+AIARA+YQN S+LILDEATSALDS+
Sbjct: 506 QTANADEFIRNLSEGYQTNIGPRGSTLSGGQKQRIAIARALYQNCSILILDEATSALDSR 565

Query: 80  SEMLVRQAVERLMENHTVLVIAHRLE 3
           SE+LVRQAVERLMEN TVLVIAHRLE
Sbjct: 566 SELLVRQAVERLMENRTVLVIAHRLE 591


>ref|XP_002530326.1| abc transporter, putative [Ricinus communis]
           gi|223530130|gb|EEF32042.1| abc transporter, putative
           [Ricinus communis]
          Length = 650

 Score =  144 bits (362), Expect = 1e-32
 Identities = 71/86 (82%), Positives = 82/86 (95%)
 Frame = -3

Query: 260 RTANADEFISKLSEGYDTNIGPRGSILSGGQKQRLAIARAIYQNSSLLILDEATSALDSK 81
           +TANADEFI KL +GY TNIGPRGS LSGGQKQRLAIARA+YQ+SS+LILDEATSALDS+
Sbjct: 525 KTANADEFIRKLPKGYKTNIGPRGSSLSGGQKQRLAIARALYQDSSILILDEATSALDSR 584

Query: 80  SEMLVRQAVERLMENHTVLVIAHRLE 3
           SE+LVRQA++RLMENHTV++IAHRLE
Sbjct: 585 SELLVRQALQRLMENHTVIIIAHRLE 610


>ref|XP_003537071.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Glycine max]
          Length = 605

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/86 (83%), Positives = 80/86 (93%)
 Frame = -3

Query: 260 RTANADEFISKLSEGYDTNIGPRGSILSGGQKQRLAIARAIYQNSSLLILDEATSALDSK 81
           +TA+ADEFI KL EGY TNIGPRGS LSGGQ+QRLAIARA YQNSS+LILDEATS+LDSK
Sbjct: 480 QTAHADEFIKKLPEGYKTNIGPRGSTLSGGQRQRLAIARAFYQNSSILILDEATSSLDSK 539

Query: 80  SEMLVRQAVERLMENHTVLVIAHRLE 3
           SE+LVRQAVERLM+N TVLVI+HRLE
Sbjct: 540 SELLVRQAVERLMQNRTVLVISHRLE 565


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