BLASTX nr result

ID: Cimicifuga21_contig00022864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022864
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...   278   2e-73
emb|CBI26575.3| unnamed protein product [Vitis vinifera]              278   2e-73
emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]   278   2e-73
ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit...   265   4e-69
emb|CBI19841.3| unnamed protein product [Vitis vinifera]              265   4e-69

>ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 834

 Score =  278 bits (712), Expect = 2e-73
 Identities = 137/167 (82%), Positives = 153/167 (91%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   IIHPCFHPEDQPAPKSYDEVFKAVFKYIDRIFSIIRPRKLLFMAIDGVAPRAKMNQQRAR 181
           IIHPCFHPE  PAPK+Y +VFKAVFKYIDRIFS++RPRKLL+MAIDGVAPRAKMNQQRAR
Sbjct: 58  IIHPCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRAR 117

Query: 182 RFRAAKDAVDEAAREERLRTVFESEGEKLSVL-QSNGLDSNVITPGTDFMATLSSALQYY 358
           RFRAAK+A D+A+  ERL+TVFESE E L++L Q+  LDSNVITPGT+FMA LSSAL+YY
Sbjct: 118 RFRAAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYY 177

Query: 359 VHLRINGDPGWRGIKVILSDANVVGEGEHKIMSYIRLQRNLPGFDPN 499
           +HLR+N DPGWRGIKVILSDANV GEGEHKIMSYIRLQRNLPGFDPN
Sbjct: 178 IHLRMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 224


>emb|CBI26575.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score =  278 bits (712), Expect = 2e-73
 Identities = 137/167 (82%), Positives = 153/167 (91%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   IIHPCFHPEDQPAPKSYDEVFKAVFKYIDRIFSIIRPRKLLFMAIDGVAPRAKMNQQRAR 181
           IIHPCFHPE  PAPK+Y +VFKAVFKYIDRIFS++RPRKLL+MAIDGVAPRAKMNQQRAR
Sbjct: 39  IIHPCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRAR 98

Query: 182 RFRAAKDAVDEAAREERLRTVFESEGEKLSVL-QSNGLDSNVITPGTDFMATLSSALQYY 358
           RFRAAK+A D+A+  ERL+TVFESE E L++L Q+  LDSNVITPGT+FMA LSSAL+YY
Sbjct: 99  RFRAAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYY 158

Query: 359 VHLRINGDPGWRGIKVILSDANVVGEGEHKIMSYIRLQRNLPGFDPN 499
           +HLR+N DPGWRGIKVILSDANV GEGEHKIMSYIRLQRNLPGFDPN
Sbjct: 159 IHLRMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 205


>emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]
          Length = 1102

 Score =  278 bits (712), Expect = 2e-73
 Identities = 137/167 (82%), Positives = 153/167 (91%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   IIHPCFHPEDQPAPKSYDEVFKAVFKYIDRIFSIIRPRKLLFMAIDGVAPRAKMNQQRAR 181
           IIHPCFHPE  PAPK+Y +VFKAVFKYIDRIFS++RPRKLL+MAIDGVAPRAKMNQQRAR
Sbjct: 189 IIHPCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRAR 248

Query: 182 RFRAAKDAVDEAAREERLRTVFESEGEKLSVL-QSNGLDSNVITPGTDFMATLSSALQYY 358
           RFRAAK+A D+A+  ERL+TVFESE E L++L Q+  LDSNVITPGT+FMA LSSAL+YY
Sbjct: 249 RFRAAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYY 308

Query: 359 VHLRINGDPGWRGIKVILSDANVVGEGEHKIMSYIRLQRNLPGFDPN 499
           +HLR+N DPGWRGIKVILSDANV GEGEHKIMSYIRLQRNLPGFDPN
Sbjct: 309 IHLRMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 355


>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
          Length = 1065

 Score =  265 bits (676), Expect = 4e-69
 Identities = 128/167 (76%), Positives = 143/167 (85%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   IIHPCFHPEDQPAPKSYDEVFKAVFKYIDRIFSIIRPRKLLFMAIDGVAPRAKMNQQRAR 181
           IIHPCFHPED+P+P ++DEVF+ +F YIDR+F ++RPRKLL+MAIDGVAPRAKMNQQR+R
Sbjct: 58  IIHPCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117

Query: 182 RFRAAKDAVDEAAREERLRTVFESEGEKL-SVLQSNGLDSNVITPGTDFMATLSSALQYY 358
           RFRAAKDA D AA EERLR  FE EG KL    QS   DSNVITPGT+FM  LS ALQYY
Sbjct: 118 RFRAAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYY 177

Query: 359 VHLRINGDPGWRGIKVILSDANVVGEGEHKIMSYIRLQRNLPGFDPN 499
           +HLR+N DPGW+ IKVILSDANV GEGEHKIMSYIRLQRNLPGFDPN
Sbjct: 178 IHLRLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 224


>emb|CBI19841.3| unnamed protein product [Vitis vinifera]
          Length = 870

 Score =  265 bits (676), Expect = 4e-69
 Identities = 128/167 (76%), Positives = 143/167 (85%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   IIHPCFHPEDQPAPKSYDEVFKAVFKYIDRIFSIIRPRKLLFMAIDGVAPRAKMNQQRAR 181
           IIHPCFHPED+P+P ++DEVF+ +F YIDR+F ++RPRKLL+MAIDGVAPRAKMNQQR+R
Sbjct: 58  IIHPCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117

Query: 182 RFRAAKDAVDEAAREERLRTVFESEGEKL-SVLQSNGLDSNVITPGTDFMATLSSALQYY 358
           RFRAAKDA D AA EERLR  FE EG KL    QS   DSNVITPGT+FM  LS ALQYY
Sbjct: 118 RFRAAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYY 177

Query: 359 VHLRINGDPGWRGIKVILSDANVVGEGEHKIMSYIRLQRNLPGFDPN 499
           +HLR+N DPGW+ IKVILSDANV GEGEHKIMSYIRLQRNLPGFDPN
Sbjct: 178 IHLRLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 224


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