BLASTX nr result

ID: Cimicifuga21_contig00022833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022833
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306937.1| predicted protein [Populus trichocarpa] gi|2...   234   2e-59
ref|XP_002510547.1| conserved hypothetical protein [Ricinus comm...   230   6e-58
ref|XP_002274273.1| PREDICTED: uncharacterized protein LOC100248...   229   1e-57
ref|XP_002467739.1| hypothetical protein SORBIDRAFT_01g033230 [S...   209   1e-51
emb|CAD37109.2| OSJNBa0024J22.22 [Oryza sativa Japonica Group] g...   208   2e-51

>ref|XP_002306937.1| predicted protein [Populus trichocarpa] gi|222856386|gb|EEE93933.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  234 bits (598), Expect = 2e-59
 Identities = 129/238 (54%), Positives = 159/238 (66%), Gaps = 6/238 (2%)
 Frame = +3

Query: 165 FQSRGLRLLQTPLPXXXXXXXXXXXXXXXX---RNQKKREARRAVQWGMELASFSVPQIK 335
           F+ RG +L  +P P                   RNQKKREARR+V+WGMELASFS PQIK
Sbjct: 54  FRPRGPKLPNSPTPYDFEQGGNVSDSDSEANKSRNQKKREARRSVRWGMELASFSPPQIK 113

Query: 336 QILRIASLDQEVFNAITLVKRFGPDVREGKRRQYNYIGRLLREVQPELMDDLIRATKDGD 515
           +I+++ASL+++VF+A+ LVKR GPDVREGKRRQYNYIG+LLRE++PELMD LI  TKDGD
Sbjct: 114 RIIKVASLEKDVFDALMLVKRLGPDVREGKRRQYNYIGKLLREMEPELMDALIHCTKDGD 173

Query: 516 QSKLQELSXXXXXXXXXXXXXXXXXXXXXXXXS---FTVVASRWSDGLINKDSEITNEVY 686
            S+LQ  S                            +  VA+RW DGLIN+D ++TNEVY
Sbjct: 174 WSRLQGFSGLEEKIAGEENEECEEREYESEEEGSHEYIDVATRWFDGLINRDIKVTNEVY 233

Query: 687 SIHNVEFDRQELRKLVRGVHNVVHRGQLTEENKAEIEAALAGANKSLNRFLRALAKQM 860
           S+ NV+FDRQELRKLVR VH V  R  +TEEN+ E++AA+  A KSL RFL  LAKQM
Sbjct: 234 SLRNVDFDRQELRKLVRRVHAVQERKGVTEENEQEVDAAITVAKKSLTRFLHDLAKQM 291


>ref|XP_002510547.1| conserved hypothetical protein [Ricinus communis]
           gi|223551248|gb|EEF52734.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 304

 Score =  230 bits (586), Expect = 6e-58
 Identities = 130/240 (54%), Positives = 157/240 (65%), Gaps = 8/240 (3%)
 Frame = +3

Query: 165 FQSRGLRLLQTPLPXXXXXXXXXXXXXXXX-----RNQKKREARRAVQWGMELASFSVPQ 329
           F+SRGLRL     P                     RNQKKREARRAV+WGMELASFS PQ
Sbjct: 60  FRSRGLRLPDATTPSDRKEGGSNSNSDSDSDEKRSRNQKKREARRAVRWGMELASFSGPQ 119

Query: 330 IKQILRIASLDQEVFNAITLVKRFGPDVREGKRRQYNYIGRLLREVQPELMDDLIRATKD 509
           IK+ILR+ASL++EV++A+ LVKR GPDVREGKRRQ+NYIG+LLREV+PELMD LI +TKD
Sbjct: 120 IKRILRMASLEREVYDALILVKRLGPDVREGKRRQFNYIGKLLREVKPELMDALIHSTKD 179

Query: 510 GDQSKLQ---ELSXXXXXXXXXXXXXXXXXXXXXXXXSFTVVASRWSDGLINKDSEITNE 680
           GD S++Q   +L                          +  +A+RW DGLINKD +ITNE
Sbjct: 180 GDWSRVQAVSDLETAIIEEADEDSEETDYDEEEEGSCEYADLATRWLDGLINKDIQITNE 239

Query: 681 VYSIHNVEFDRQELRKLVRGVHNVVHRGQLTEENKAEIEAALAGANKSLNRFLRALAKQM 860
           VY+I +++FDRQELRKLVR VH V     + EENK E + A+  A K L RFL ALAKQM
Sbjct: 240 VYAISSIDFDRQELRKLVRRVHAVQEGKNVIEENKQEADTAVMAATKPLLRFLHALAKQM 299


>ref|XP_002274273.1| PREDICTED: uncharacterized protein LOC100248885 [Vitis vinifera]
           gi|302142678|emb|CBI19881.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score =  229 bits (583), Expect = 1e-57
 Identities = 130/238 (54%), Positives = 160/238 (67%), Gaps = 6/238 (2%)
 Frame = +3

Query: 165 FQSRGLRLLQTPLPXXXXXXXXXXXXXXXX-RNQKKREARRAVQWGMELASFSVPQIKQI 341
           F+S GLRL   P P                 RN++KREARRAV+WGMELA+FS PQIK+I
Sbjct: 58  FRSYGLRLPNDPAPSHLQETAGEQDSDAKRSRNERKREARRAVRWGMELAAFSTPQIKRI 117

Query: 342 LRIASLDQEVFNAITLVKRFGPDVREGKRRQYNYIGRLLREVQPELMDDLIRATKDGDQS 521
           LR+ASL++EVF+A+ LVKR GPDVREGKRRQ+NYIGRLLR VQPELMD LI+A+KDGDQS
Sbjct: 118 LRMASLEREVFDALMLVKRLGPDVREGKRRQFNYIGRLLRGVQPELMDALIQASKDGDQS 177

Query: 522 KLQELS-----XXXXXXXXXXXXXXXXXXXXXXXXSFTVVASRWSDGLINKDSEITNEVY 686
           +LQ LS                             ++  +A+RWSDGLINKD ++TNEVY
Sbjct: 178 RLQALSGLDTRVVEEDGEEDEANEEDYEEEDEESNTYIDIATRWSDGLINKDIDVTNEVY 237

Query: 687 SIHNVEFDRQELRKLVRGVHNVVHRGQLTEENKAEIEAALAGANKSLNRFLRALAKQM 860
           S+ +VEFDRQELRKLVR VH++     + +E   E + AL GA KSL +FL  LAKQ+
Sbjct: 238 SVQSVEFDRQELRKLVRKVHSIQGHQAIIKE---EEDVALLGAKKSLFQFLYTLAKQL 292


>ref|XP_002467739.1| hypothetical protein SORBIDRAFT_01g033230 [Sorghum bicolor]
           gi|241921593|gb|EER94737.1| hypothetical protein
           SORBIDRAFT_01g033230 [Sorghum bicolor]
          Length = 273

 Score =  209 bits (532), Expect = 1e-51
 Identities = 115/203 (56%), Positives = 141/203 (69%), Gaps = 2/203 (0%)
 Frame = +3

Query: 255 RNQKKREARRAVQWGMELASFSVPQIKQILRIASLDQEVFNAITLVKRFGPDVREGKRRQ 434
           RN+ KREARRAV+WGM+LASFS PQIK+IL  ASL++EVF+A+ LVK+FGPDVREGKRRQ
Sbjct: 72  RNELKREARRAVKWGMDLASFSPPQIKRILSAASLEREVFDALMLVKKFGPDVREGKRRQ 131

Query: 435 YNYIGRLLREVQPELMDDLIRATKDGDQSKLQELSXXXXXXXXXXXXXXXXXXXXXXXXS 614
           +NYIGRLLR  QPELMD LI+A+KDGD+SKL  L                          
Sbjct: 132 FNYIGRLLRNAQPELMDTLIQASKDGDESKLHAL-LSEGTLLVEEEEVEDLPDEQEDNQE 190

Query: 615 FTVVASRWSDGLINKDSEITNEVYSIHNVEFDRQELRKLVRGVHNVVHRGQLTEENK--A 788
           +  +A RW DGL+ KD  +TNEVYS+H+VEFDRQELRKLV+  H V    Q +  NK   
Sbjct: 191 YIKIADRWFDGLLCKDISVTNEVYSVHSVEFDRQELRKLVKRAHMV----QESTHNKDGE 246

Query: 789 EIEAALAGANKSLNRFLRALAKQ 857
           +    L+GA K+L RFLR+LAK+
Sbjct: 247 DSNVKLSGAKKTLMRFLRSLAKE 269


>emb|CAD37109.2| OSJNBa0024J22.22 [Oryza sativa Japonica Group]
           gi|38567940|emb|CAE03985.3| OSJNBa0033H08.17 [Oryza
           sativa Japonica Group] gi|116309541|emb|CAH66604.1|
           H0211A12.7 [Oryza sativa Indica Group]
           gi|125589628|gb|EAZ29978.1| hypothetical protein
           OsJ_14037 [Oryza sativa Japonica Group]
          Length = 276

 Score =  208 bits (530), Expect = 2e-51
 Identities = 112/201 (55%), Positives = 136/201 (67%)
 Frame = +3

Query: 255 RNQKKREARRAVQWGMELASFSVPQIKQILRIASLDQEVFNAITLVKRFGPDVREGKRRQ 434
           RN  KREARRAVQWGM+LA FS PQIK+ILR ASLD+EVF+A+ LVKRFG DVREGKRRQ
Sbjct: 73  RNDLKREARRAVQWGMDLAKFSPPQIKRILRAASLDREVFDALMLVKRFGSDVREGKRRQ 132

Query: 435 YNYIGRLLREVQPELMDDLIRATKDGDQSKLQELSXXXXXXXXXXXXXXXXXXXXXXXXS 614
           +NYIGRLLR  QPELMD LI+ +KDGD ++L  L                          
Sbjct: 133 FNYIGRLLRGAQPELMDTLIQYSKDGDDNRLLALMSENTFLMEDEEIEDLPCNEEEGDKE 192

Query: 615 FTVVASRWSDGLINKDSEITNEVYSIHNVEFDRQELRKLVRGVHNVVHRGQLTEENKAEI 794
              +A RW +GL++KD  +TNE+Y+IHNVEFDRQELRKLVR VH V  +  +  E++ E 
Sbjct: 193 HIEIADRWFEGLLSKDISVTNEIYAIHNVEFDRQELRKLVRTVHMV--QDNIENEHEEES 250

Query: 795 EAALAGANKSLNRFLRALAKQ 857
              L GA K L  FLR++AK+
Sbjct: 251 TMKLLGAKKQLLCFLRSIAKE 271


Top