BLASTX nr result

ID: Cimicifuga21_contig00022818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022818
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515467.1| conserved hypothetical protein [Ricinus comm...    82   5e-14
ref|XP_003631764.1| PREDICTED: uncharacterized protein LOC100854...    76   4e-12
ref|XP_003609512.1| hypothetical protein MTR_4g116500 [Medicago ...    71   1e-10
ref|XP_002304243.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002308686.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08

>ref|XP_002515467.1| conserved hypothetical protein [Ricinus communis]
           gi|223545411|gb|EEF46916.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 133

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 48/113 (42%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
 Frame = +3

Query: 36  CYSPSLKHKLRSSLCCCFPLVQES---GDEKPXXXXXXXXXXXXWAHELPQ---FKDKCR 197
           C+SPSLKHKL+SS+CC FP        G                W     Q    K+KC 
Sbjct: 7   CHSPSLKHKLKSSICC-FPSSHHHETLGGSDDSRRQLTPRSPYAWLKSTAQEFEIKEKCW 65

Query: 198 NLFSRIGKGRRKRCSADFRYDPLSYALNFDQGSQEFQEEDDFSLRNFASRLPA 356
            L  R GK RR+  SADFRYD  SY+LNF+    +  +ED+  L NF +RLPA
Sbjct: 66  GLIGRRGKNRRRHNSADFRYDAASYSLNFE---DDIHKEDELPLNNFTARLPA 115


>ref|XP_003631764.1| PREDICTED: uncharacterized protein LOC100854026 [Vitis vinifera]
          Length = 132

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = +3

Query: 21  YEREPCYSPSLKHKLRSSLCCCFPLVQESGD-EKPXXXXXXXXXXXXWAHELPQFKDKCR 197
           Y   P  SP+ + K    LCCCF  ++ +G   K              A ELP  K+KCR
Sbjct: 4   YGDTPAQSPNHRIKFSMCLCCCFRGLELAGSLSKRRLVGRSSAWLRSTARELPVIKEKCR 63

Query: 198 NLFSRIGKGRRKRCSADFRYDPLSYALNFDQGSQEFQEEDDFSLRNFASRLPA 356
           NL +R+ K  R R S +F YDPLSYALNFD G    + ++   +++F++RLPA
Sbjct: 64  NLMARMRK--RHRNSVNFSYDPLSYALNFDDG----ENDEAQMMKSFSARLPA 110


>ref|XP_003609512.1| hypothetical protein MTR_4g116500 [Medicago truncatula]
           gi|355510567|gb|AES91709.1| hypothetical protein
           MTR_4g116500 [Medicago truncatula]
          Length = 138

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 47/111 (42%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
 Frame = +3

Query: 48  SLKHKLRSSLC--CCF------PLVQESGDEKPXXXXXXXXXXXXWAHELPQFKDKCRNL 203
           SLK+KL+SSLC  CCF      P +  S   +                +LP  K+KC N 
Sbjct: 14  SLKYKLKSSLCFSCCFSHHRVKPRIVRSSSLRTHNRNHNNNSRSI---DLPHLKEKCTNF 70

Query: 204 FSRIGKGRRKRCSADFRYDPLSYALNFDQGSQEFQEEDDFSLRNFASRLPA 356
            SRI   RR+  SADF YD LSYALNF+  + + +  DD  LR+F++RLPA
Sbjct: 71  ISRIVHHRRRH-SADFHYDALSYALNFEDDANDEKSVDD--LRSFSARLPA 118


>ref|XP_002304243.1| predicted protein [Populus trichocarpa] gi|222841675|gb|EEE79222.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 46/125 (36%), Positives = 63/125 (50%), Gaps = 18/125 (14%)
 Frame = +3

Query: 36  CYSP-SLKHKLRSSLCCCFPLVQ-------------ESGDEKPXXXXXXXXXXXXW---- 161
           C SP SLK KL+SS CC FP ++             + G  +             W    
Sbjct: 9   CDSPTSLKAKLKSSFCC-FPNMEMINQREMLHQDHDQEGSNRMKLQPQTPRSPYAWLKST 67

Query: 162 AHELPQFKDKCRNLFSRIGKGRRKRCSADFRYDPLSYALNFDQGSQEFQEEDDFSLRNFA 341
           AH+L +FK K R    + GK R++ CS +FRYDP SY+LNF+    +  +ED+  L+   
Sbjct: 68  AHDL-EFKYKYRCFIGKRGKNRKRHCSEEFRYDPESYSLNFE---DDVHKEDELPLK--- 120

Query: 342 SRLPA 356
           SRLPA
Sbjct: 121 SRLPA 125


>ref|XP_002308686.1| predicted protein [Populus trichocarpa] gi|222854662|gb|EEE92209.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 44/120 (36%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
 Frame = +3

Query: 48  SLKHKLRSSLCCCFP---------LVQESGDE-------KPXXXXXXXXXXXXWAHELPQ 179
           SLK KL+SSLCC            L Q+   E       +P              H+L +
Sbjct: 15  SLKAKLKSSLCCFSSSEMIHQHQTLDQDHDQEGNNSRKLQPQTPRSPYAWLKSTTHDL-E 73

Query: 180 FKDKCRNLFSRIGKGRRKRCSADFRYDPLSYALNFDQGSQEFQEEDDFSL-RNFASRLPA 356
              K R L  +IGK R++ CS DFRYDP SY+LNF+    +   ED+  L  NF +R PA
Sbjct: 74  IMYKYRGLIGKIGKNRKRHCSEDFRYDPRSYSLNFE---DDLNREDELPLNHNFRARFPA 130


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