BLASTX nr result

ID: Cimicifuga21_contig00022769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022769
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524665.1| pentatricopeptide repeat-containing protein,...   156   2e-36
ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helica...   155   3e-36
ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helica...   155   3e-36
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...   154   7e-36
emb|CBI34887.3| unnamed protein product [Vitis vinifera]              154   7e-36

>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 2000

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/80 (91%), Positives = 78/80 (97%)
 Frame = +3

Query: 3    HTVVIKSTQNFNKEKGMYLEYDRSLILQMCGRAGRPPFDDTGMVIIMTRRDTVHLYENLL 182
            HTVVIKSTQ+FNKEKG+Y+EYDRS ILQMCGRAGRPPFDDTG+VIIMTRR+TVHLYENLL
Sbjct: 1132 HTVVIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTGLVIIMTRRETVHLYENLL 1191

Query: 183  NGCEMVESQLLSCVTEHLAA 242
            NGCEMVESQLLSCVTEHL A
Sbjct: 1192 NGCEMVESQLLSCVTEHLTA 1211


>ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Cucumis
           sativus] gi|449483903|ref|XP_004156727.1| PREDICTED:
           probable ATP-dependent DNA helicase HFM1-like [Cucumis
           sativus]
          Length = 1189

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/80 (90%), Positives = 78/80 (97%)
 Frame = +3

Query: 3   HTVVIKSTQNFNKEKGMYLEYDRSLILQMCGRAGRPPFDDTGMVIIMTRRDTVHLYENLL 182
           HTV+IKSTQ+FNKEKG+Y+EYDRS ILQMCGRAGRPPFDDTG+VIIMTRRDTVHLYENLL
Sbjct: 454 HTVIIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLL 513

Query: 183 NGCEMVESQLLSCVTEHLAA 242
           NGCE+VESQLLSCVTEHL A
Sbjct: 514 NGCEIVESQLLSCVTEHLTA 533


>ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Glycine
           max]
          Length = 1195

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/80 (91%), Positives = 78/80 (97%)
 Frame = +3

Query: 3   HTVVIKSTQNFNKEKGMYLEYDRSLILQMCGRAGRPPFDDTGMVIIMTRRDTVHLYENLL 182
           HTVVIKSTQ+FNKEKG+Y+EYDRS ILQMCGRAGRPPFDDTGMVIIMTRR+TVHLYENLL
Sbjct: 379 HTVVIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTGMVIIMTRRETVHLYENLL 438

Query: 183 NGCEMVESQLLSCVTEHLAA 242
           NGCE+VESQLLSCVTEHL A
Sbjct: 439 NGCEVVESQLLSCVTEHLLA 458


>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/80 (88%), Positives = 78/80 (97%)
 Frame = +3

Query: 3    HTVVIKSTQNFNKEKGMYLEYDRSLILQMCGRAGRPPFDDTGMVIIMTRRDTVHLYENLL 182
            HTVVIKSTQ+FNKEKG+Y+EYDRS+ILQMCGRAGRPPF+DTGM IIMTRR+TVHLYENLL
Sbjct: 1130 HTVVIKSTQHFNKEKGLYMEYDRSMILQMCGRAGRPPFEDTGMAIIMTRRETVHLYENLL 1189

Query: 183  NGCEMVESQLLSCVTEHLAA 242
            NGCE+VESQLLSCVTEHL A
Sbjct: 1190 NGCELVESQLLSCVTEHLTA 1209


>emb|CBI34887.3| unnamed protein product [Vitis vinifera]
          Length = 1270

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/80 (88%), Positives = 78/80 (97%)
 Frame = +3

Query: 3   HTVVIKSTQNFNKEKGMYLEYDRSLILQMCGRAGRPPFDDTGMVIIMTRRDTVHLYENLL 182
           HTVVIKSTQ+FNKEKG+Y+EYDRS+ILQMCGRAGRPPF+DTGM IIMTRR+TVHLYENLL
Sbjct: 382 HTVVIKSTQHFNKEKGLYMEYDRSMILQMCGRAGRPPFEDTGMAIIMTRRETVHLYENLL 441

Query: 183 NGCEMVESQLLSCVTEHLAA 242
           NGCE+VESQLLSCVTEHL A
Sbjct: 442 NGCELVESQLLSCVTEHLTA 461


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