BLASTX nr result

ID: Cimicifuga21_contig00022746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022746
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vit...   128   6e-28
ref|XP_002318764.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002511110.1| DNA binding protein, putative [Ricinus commu...   122   3e-26
ref|XP_002322296.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like ...   117   1e-24

>ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
           gi|297734492|emb|CBI15739.3| unnamed protein product
           [Vitis vinifera]
          Length = 349

 Score =  128 bits (321), Expect = 6e-28
 Identities = 72/121 (59%), Positives = 84/121 (69%), Gaps = 16/121 (13%)
 Frame = +1

Query: 1   REKISERLKLLQSLVPGCDKVTSKALMLDEIINYVQSLQHQVEFLSMRIACTSPMVYNLG 180
           REKISER+KLLQ+LVPGCDKVT KALMLDEIINYVQSLQ+QVEFLSM++A  +PM Y+ G
Sbjct: 190 REKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDFG 249

Query: 181 GHDITSMVKPEKLSSLASP-----------STAVADIT-----ANNYPLTDSSVSYLLQQ 312
                 MV+PE+LS+L SP            TA AD T      NNYP+ D+S S L  Q
Sbjct: 250 MDLDALMVRPERLSALTSPLPSLQQCSPSQPTAYADTTTTFTATNNYPVMDTSASILFHQ 309

Query: 313 G 315
           G
Sbjct: 310 G 310


>ref|XP_002318764.1| predicted protein [Populus trichocarpa] gi|222859437|gb|EEE96984.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  124 bits (310), Expect = 1e-26
 Identities = 72/129 (55%), Positives = 84/129 (65%), Gaps = 26/129 (20%)
 Frame = +1

Query: 1   REKISERLKLLQSLVPGCDKVTSKALMLDEIINYVQSLQHQVEFLSMRIACTSPMVYNLG 180
           REKISER+K+LQ LVPGCDKVT KALMLDEIINYVQSLQ+QVEFLSM++A  +PM Y+ G
Sbjct: 191 REKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDFG 250

Query: 181 GHDITSMVKPEKLSSLASP-----------STAVAD---------------ITANNYPLT 282
                 MV+PE+LSS++ P            TA AD                TANNYPL 
Sbjct: 251 MELDAFMVRPERLSSMSPPLPSLQQCSPIQPTAFADAAAAATTTATPTTSFATANNYPLI 310

Query: 283 DSSVSYLLQ 309
           D+S S LLQ
Sbjct: 311 DNSTSLLLQ 319


>ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
           gi|223550225|gb|EEF51712.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 422

 Score =  122 bits (306), Expect = 3e-26
 Identities = 73/132 (55%), Positives = 87/132 (65%), Gaps = 24/132 (18%)
 Frame = +1

Query: 1   REKISERLKLLQSLVPGCDKVTSKALMLDEIINYVQSLQHQVEFLSMRIACTSPMVYNLG 180
           REKISER+K+LQ LVPGCDKVT KALMLDEIINYVQSLQ+QVEFLSM++A  +P+ Y+ G
Sbjct: 191 REKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPLFYDFG 250

Query: 181 GHDITSMVKPEKLSSLAS---------PSTAVAD---------------ITANNYPLTDS 288
                 MV+PE L+SLAS         P+TA AD               +TANNY L D+
Sbjct: 251 MDFDALMVRPEGLNSLASSLPLMQQCPPTTAFADSTATATTTTAATSTFVTANNYSLMDA 310

Query: 289 SVSYLLQQGGQR 324
           S  +LL   GQR
Sbjct: 311 SAPFLLP--GQR 320


>ref|XP_002322296.1| predicted protein [Populus trichocarpa] gi|222869292|gb|EEF06423.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  118 bits (295), Expect = 6e-25
 Identities = 65/124 (52%), Positives = 83/124 (66%), Gaps = 21/124 (16%)
 Frame = +1

Query: 1   REKISERLKLLQSLVPGCDKVTSKALMLDEIINYVQSLQHQVEFLSMRIACTSPMVYNLG 180
           RE+ISER+K+LQ LVPGCDK+T KALMLDEIINYVQSLQ+QVEFLSM++A  +P++Y+ G
Sbjct: 193 RERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQVEFLSMKLASVNPLLYDFG 252

Query: 181 GHDITSMVKPEKLSSLASP-----------STAVADITA----------NNYPLTDSSVS 297
                 MV+PE+LSS++ P            TA AD  +          NNYPL D+S +
Sbjct: 253 MDRDAFMVRPERLSSMSPPLPSLQHNSPIQPTAFADTASATTATFATEENNYPLIDNSAT 312

Query: 298 YLLQ 309
             LQ
Sbjct: 313 LFLQ 316


>ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
          Length = 320

 Score =  117 bits (293), Expect = 1e-24
 Identities = 73/133 (54%), Positives = 88/133 (66%), Gaps = 25/133 (18%)
 Frame = +1

Query: 1   REKISERLKLLQSLVPGCDKVTSKALMLDEIINYVQSLQHQVEFLSMRIACTSPMVYNLG 180
           REKISER+K+LQ LVPGCDKVT KALMLDEIINYVQSLQ+QVEFLSM++A  +PM Y+L 
Sbjct: 183 REKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDLA 242

Query: 181 GHDITSMVKPEKLSSLASPS---------------TAVADI----------TANNYPLTD 285
               T +V+PEKL+S+ASPS               T  AD           T ++Y L D
Sbjct: 243 TDLDTLLVRPEKLNSMASPSPLPSMSHCNSPNNQATTFADTTTMTPTNIFHTTSDY-LLD 301

Query: 286 SSVSYLLQQGGQR 324
           +SVS+ LQ  GQR
Sbjct: 302 NSVSFFLQ--GQR 312


Top