BLASTX nr result

ID: Cimicifuga21_contig00022734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022734
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_974127.1| tyrosine phosphatase 1 [Arabidopsis thaliana] g...   100   2e-19
ref|NP_177331.1| tyrosine phosphatase 1 [Arabidopsis thaliana] g...   100   2e-19
ref|XP_003556188.1| PREDICTED: tyrosine-protein phosphatase non-...    99   3e-19
ref|XP_002887394.1| hypothetical protein ARALYDRAFT_339406 [Arab...    99   5e-19
emb|CBI18544.3| unnamed protein product [Vitis vinifera]               98   8e-19

>ref|NP_974127.1| tyrosine phosphatase 1 [Arabidopsis thaliana]
           gi|332197120|gb|AEE35241.1| tyrosine phosphatase 1
           [Arabidopsis thaliana]
          Length = 277

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/69 (68%), Positives = 55/69 (79%), Gaps = 2/69 (2%)
 Frame = -3

Query: 207 RVVLKSSNGGS--GYINASLIKVDSSERVSEFIATQGPLPHTSEDFWEMVIQYHCPVIVM 34
           R+VL      S  GY+NASLIK   SE +S+FIATQGPLPHT EDFWEMVIQ HCP+IVM
Sbjct: 103 RIVLNPCKDSSAKGYVNASLIKTSESESISQFIATQGPLPHTMEDFWEMVIQQHCPIIVM 162

Query: 33  LTQLVDSNK 7
           LT+LVD+N+
Sbjct: 163 LTRLVDNNR 171


>ref|NP_177331.1| tyrosine phosphatase 1 [Arabidopsis thaliana]
           gi|79321133|ref|NP_001031266.1| tyrosine phosphatase 1
           [Arabidopsis thaliana]
           gi|75279131|sp|O82656.1|PTP1_ARATH RecName:
           Full=Protein-tyrosine-phosphatase PTP1; AltName:
           Full=Protein tyrosine phosphatase 1; Short=AtPTP1
           gi|7239513|gb|AAF43239.1|AC012654_23 Strong similarity
           to the tyrosine phosphatase from Arabidopsis thaliana
           gb|AJ006309. EST gb|AA042465 comes from this gene
           [Arabidopsis thaliana] gi|3413425|emb|CAA06978.1|
           protein tyrosine phosphatase [Arabidopsis thaliana]
           gi|17979347|gb|AAL49899.1| putative protein tyrosine
           phosphatase [Arabidopsis thaliana]
           gi|21436137|gb|AAM51315.1| putative protein tyrosine
           phosphatase [Arabidopsis thaliana]
           gi|332197121|gb|AEE35242.1| tyrosine phosphatase 1
           [Arabidopsis thaliana] gi|332197122|gb|AEE35243.1|
           tyrosine phosphatase 1 [Arabidopsis thaliana]
          Length = 340

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/69 (68%), Positives = 55/69 (79%), Gaps = 2/69 (2%)
 Frame = -3

Query: 207 RVVLKSSNGGS--GYINASLIKVDSSERVSEFIATQGPLPHTSEDFWEMVIQYHCPVIVM 34
           R+VL      S  GY+NASLIK   SE +S+FIATQGPLPHT EDFWEMVIQ HCP+IVM
Sbjct: 103 RIVLNPCKDSSAKGYVNASLIKTSESESISQFIATQGPLPHTMEDFWEMVIQQHCPIIVM 162

Query: 33  LTQLVDSNK 7
           LT+LVD+N+
Sbjct: 163 LTRLVDNNR 171


>ref|XP_003556188.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 20-like
           [Glycine max]
          Length = 338

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/72 (68%), Positives = 55/72 (76%), Gaps = 4/72 (5%)
 Frame = -3

Query: 207 RVVLKSSNG----GSGYINASLIKVDSSERVSEFIATQGPLPHTSEDFWEMVIQYHCPVI 40
           RVVLKSS        GYINASLI   S+  VS FIATQGPLPHT EDFWEM+ QYHCPVI
Sbjct: 104 RVVLKSSTDYRPEAQGYINASLISTSSAGNVSHFIATQGPLPHTCEDFWEMITQYHCPVI 163

Query: 39  VMLTQLVDSNKL 4
           +MLT+LVD+ K+
Sbjct: 164 IMLTRLVDNYKM 175


>ref|XP_002887394.1| hypothetical protein ARALYDRAFT_339406 [Arabidopsis lyrata subsp.
           lyrata] gi|297333235|gb|EFH63653.1| hypothetical protein
           ARALYDRAFT_339406 [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 43/60 (71%), Positives = 51/60 (85%)
 Frame = -3

Query: 186 NGGSGYINASLIKVDSSERVSEFIATQGPLPHTSEDFWEMVIQYHCPVIVMLTQLVDSNK 7
           +   GY+NASLIK   SE +S+FIATQGPLPHT EDFWEMVIQ HCP+IVMLT+LVD+N+
Sbjct: 114 SSAKGYVNASLIKTSDSESISQFIATQGPLPHTMEDFWEMVIQQHCPIIVMLTRLVDNNR 173


>emb|CBI18544.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/71 (69%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
 Frame = -3

Query: 207 RVVLKSSN----GGSGYINASLIKVDSSERVSEFIATQGPLPHTSEDFWEMVIQYHCPVI 40
           RVVL S         GYINAS I+  S+E +S FIATQGPLPHT EDFWEMVIQYHCPVI
Sbjct: 101 RVVLNSCKDYRPSARGYINASFIETSSTESISRFIATQGPLPHTYEDFWEMVIQYHCPVI 160

Query: 39  VMLTQLVDSNK 7
           VMLT+LVD+ K
Sbjct: 161 VMLTRLVDNYK 171


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