BLASTX nr result

ID: Cimicifuga21_contig00022705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022705
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26213.3| unnamed protein product [Vitis vinifera]              456   e-126
ref|XP_002281240.2| PREDICTED: transcription regulatory protein ...   454   e-125
ref|XP_002311608.1| chromatin remodeling complex subunit [Populu...   454   e-125
emb|CAN75986.1| hypothetical protein VITISV_012191 [Vitis vinifera]   416   e-114
ref|XP_003535660.1| PREDICTED: transcription regulatory protein ...   412   e-113

>emb|CBI26213.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score =  456 bits (1173), Expect = e-126
 Identities = 245/346 (70%), Positives = 273/346 (78%)
 Frame = +3

Query: 102  IRSGPSIDHVDKTKTLIYALNLISRNLPLPPHVFDTVSSIYRSNDDGDSAFSDNGGDGAL 281
            + S P++D V K KTLI ALNLISRNLPLPP VF+ VSSIY ++D  D A          
Sbjct: 5    LESHPTLDPVQKAKTLICALNLISRNLPLPPDVFNAVSSIYHADDLLDRA---------- 54

Query: 282  DDVENGDNCRVEENSHHPESSEMGDLVTEFEDVLLMQRSNCMSGMGLRTSRESRLQSHIQ 461
             DV+  D    E+ S  P  S  GDL+ + +D L+ QR NC SG+ L  SRE+RLQSHIQ
Sbjct: 55   -DVDTLDTPS-EKVSDGPGISGGGDLIIDLDDALVKQRPNCTSGIELTKSRENRLQSHIQ 112

Query: 462  HRLNELEGLPSTRGEDLQMKCLLELYGLKLADLQNKVRADVSSEYWLREKCGYPDKQLFD 641
            HRL +LE LPSTRGEDLQ KCLLELYGLKL +LQ+KVR+DVSSEYWLR  C YPDKQLFD
Sbjct: 113  HRLTQLEELPSTRGEDLQTKCLLELYGLKLVELQSKVRSDVSSEYWLRMNCAYPDKQLFD 172

Query: 642  WGMMRLHRPFILYGMGDAFAMEADERQRKKRDTERLSRLEEEEKNRIETGKRKFFAEILN 821
            WGMMRL RP  LYG+GDAFAMEAD++ RKKRD ERLSRLEEEEKNR+ET KRKFFAEILN
Sbjct: 173  WGMMRLRRP--LYGVGDAFAMEADDQFRKKRDAERLSRLEEEEKNRLETRKRKFFAEILN 230

Query: 822  IAREFQLQGQASLKRRKQRNDGVQAWHARQRQRATRAEKLRFQALKADDQEAYMKMVEES 1001
              REFQLQ QASLKRRKQRNDGVQAWH RQRQRATRAEKLRFQALKADDQEAYM+MV+ES
Sbjct: 231  AVREFQLQVQASLKRRKQRNDGVQAWHGRQRQRATRAEKLRFQALKADDQEAYMRMVKES 290

Query: 1002 KNERLTMLLGKTNDLLARLGAAVKKQKDAEHSAGIEVLEGLEAEEP 1139
            KNERLTMLL KTNDLL  LGAAV++QK AE S GIE L+  E + P
Sbjct: 291  KNERLTMLLKKTNDLLVDLGAAVQRQKGAEQSDGIETLKSPEPDLP 336


>ref|XP_002281240.2| PREDICTED: transcription regulatory protein SNF2-like [Vitis
            vinifera]
          Length = 1114

 Score =  454 bits (1167), Expect = e-125
 Identities = 246/348 (70%), Positives = 276/348 (79%), Gaps = 2/348 (0%)
 Frame = +3

Query: 102  IRSGPSIDHVDKTKTLIYALNLISRNLPLPPHVFDTVSSIYRSNDDGDSAFSDNGGDGAL 281
            + S P++D V K KTLI ALNLISRNLPLPP VF+ VSSIY ++D  D A  D   D   
Sbjct: 5    LESHPTLDPVQKAKTLICALNLISRNLPLPPDVFNAVSSIYHADDLLDRADVDTL-DTPS 63

Query: 282  DDV--ENGDNCRVEENSHHPESSEMGDLVTEFEDVLLMQRSNCMSGMGLRTSRESRLQSH 455
            + V  E G N  + ++   P  S  GDL+ + +D L+ QR NC SG+ L  SRE+RLQSH
Sbjct: 64   EKVLLEFGFNIFMMQDG--PGISGGGDLIIDLDDALVKQRPNCTSGIELTKSRENRLQSH 121

Query: 456  IQHRLNELEGLPSTRGEDLQMKCLLELYGLKLADLQNKVRADVSSEYWLREKCGYPDKQL 635
            IQHRL +LE LPSTRGEDLQ KCLLELYGLKL +LQ+KVR+DVSSEYWLR  C YPDKQL
Sbjct: 122  IQHRLTQLEELPSTRGEDLQTKCLLELYGLKLVELQSKVRSDVSSEYWLRMNCAYPDKQL 181

Query: 636  FDWGMMRLHRPFILYGMGDAFAMEADERQRKKRDTERLSRLEEEEKNRIETGKRKFFAEI 815
            FDWGMMRL RP  LYG+GDAFAMEAD++ RKKRD ERLSRLEEEEKNR+ET KRKFFAEI
Sbjct: 182  FDWGMMRLRRP--LYGVGDAFAMEADDQFRKKRDAERLSRLEEEEKNRLETRKRKFFAEI 239

Query: 816  LNIAREFQLQGQASLKRRKQRNDGVQAWHARQRQRATRAEKLRFQALKADDQEAYMKMVE 995
            LN  REFQLQ QASLKRRKQRNDGVQAWH RQRQRATRAEKLRFQALKADDQEAYM+MV+
Sbjct: 240  LNAVREFQLQVQASLKRRKQRNDGVQAWHGRQRQRATRAEKLRFQALKADDQEAYMRMVK 299

Query: 996  ESKNERLTMLLGKTNDLLARLGAAVKKQKDAEHSAGIEVLEGLEAEEP 1139
            ESKNERLTMLL KTNDLL  LGAAV++QK AE S GIE L+  E + P
Sbjct: 300  ESKNERLTMLLKKTNDLLVDLGAAVQRQKGAEQSDGIETLKSPEPDLP 347


>ref|XP_002311608.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222851428|gb|EEE88975.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1131

 Score =  454 bits (1167), Expect = e-125
 Identities = 239/339 (70%), Positives = 274/339 (80%)
 Frame = +3

Query: 123  DHVDKTKTLIYALNLISRNLPLPPHVFDTVSSIYRSNDDGDSAFSDNGGDGALDDVENGD 302
            DHV KTK+LI ALN +SR+LPLPP +FDTVSSIY  +DDG++ F     D +   +E G 
Sbjct: 24   DHVQKTKSLISALNFVSRDLPLPPDLFDTVSSIY--SDDGNADFDGGTQDKSRLLLECGF 81

Query: 303  NCRVEENSHHPESSEMGDLVTEFEDVLLMQRSNCMSGMGLRTSRESRLQSHIQHRLNELE 482
            N   + N   P  S  GDL+TEFED L  QR NCMSG  L   RE+R QSHI HR+NELE
Sbjct: 82   NITQQGN---PGISIRGDLMTEFEDALSKQRPNCMSGFALAELRENRYQSHILHRINELE 138

Query: 483  GLPSTRGEDLQMKCLLELYGLKLADLQNKVRADVSSEYWLREKCGYPDKQLFDWGMMRLH 662
             L STRGEDLQMKCLLEL+GLKLA+LQ+KVR++VSSEYWLR  C +PDKQLFDWG+MRL 
Sbjct: 139  ELSSTRGEDLQMKCLLELHGLKLAELQSKVRSEVSSEYWLRLNCTFPDKQLFDWGIMRLP 198

Query: 663  RPFILYGMGDAFAMEADERQRKKRDTERLSRLEEEEKNRIETGKRKFFAEILNIAREFQL 842
            RP  LYG+GDAFAMEAD++ RKKRD ERLSRLEEEE+N +ET KRKFFAEILN  REFQL
Sbjct: 199  RP--LYGIGDAFAMEADDQFRKKRDAERLSRLEEEERNHVETRKRKFFAEILNAVREFQL 256

Query: 843  QGQASLKRRKQRNDGVQAWHARQRQRATRAEKLRFQALKADDQEAYMKMVEESKNERLTM 1022
            Q QA+LKRRKQRNDG+QAWH RQRQRATRAEKLR QALKADDQEAYM+MV+ESKNERLTM
Sbjct: 257  QVQATLKRRKQRNDGIQAWHGRQRQRATRAEKLRLQALKADDQEAYMRMVKESKNERLTM 316

Query: 1023 LLGKTNDLLARLGAAVKKQKDAEHSAGIEVLEGLEAEEP 1139
            LL +TN LL  LGAAV++QKDA+HS GIE L+ LEA+ P
Sbjct: 317  LLEETNKLLVNLGAAVQRQKDAKHSDGIEPLKDLEADSP 355


>emb|CAN75986.1| hypothetical protein VITISV_012191 [Vitis vinifera]
          Length = 568

 Score =  416 bits (1069), Expect = e-114
 Identities = 230/346 (66%), Positives = 256/346 (73%)
 Frame = +3

Query: 102  IRSGPSIDHVDKTKTLIYALNLISRNLPLPPHVFDTVSSIYRSNDDGDSAFSDNGGDGAL 281
            + S P++D V K KTLI ALNLISRNLPLPP VF+ VSSIY ++D  D A          
Sbjct: 5    LESHPTLDPVQKAKTLICALNLISRNLPLPPDVFNAVSSIYHADDLLDRA---------- 54

Query: 282  DDVENGDNCRVEENSHHPESSEMGDLVTEFEDVLLMQRSNCMSGMGLRTSRESRLQSHIQ 461
             DV+  D    E+ S  P  S  GDL+ + +D L+ QR NC SG                
Sbjct: 55   -DVDTLDTPS-EKVSDGPGISGGGDLIIDLDDALVKQRPNCTSGYSY------------- 99

Query: 462  HRLNELEGLPSTRGEDLQMKCLLELYGLKLADLQNKVRADVSSEYWLREKCGYPDKQLFD 641
              +N    LPSTRGEDLQ KCLLELYGLKL +LQ+KVR+DVSSEYWLR  C YPDKQLFD
Sbjct: 100  --INVKPELPSTRGEDLQTKCLLELYGLKLVELQSKVRSDVSSEYWLRMNCAYPDKQLFD 157

Query: 642  WGMMRLHRPFILYGMGDAFAMEADERQRKKRDTERLSRLEEEEKNRIETGKRKFFAEILN 821
            WGMMRL RP  LYG+GDAFAMEAD++ RKKRD ERLSRLEEEEKNR+ET KRKFFAEILN
Sbjct: 158  WGMMRLRRP--LYGVGDAFAMEADDQFRKKRDAERLSRLEEEEKNRLETRKRKFFAEILN 215

Query: 822  IAREFQLQGQASLKRRKQRNDGVQAWHARQRQRATRAEKLRFQALKADDQEAYMKMVEES 1001
              REFQLQ QASLKRRKQRNDGVQAWH RQRQRATRAEKLRFQALKADDQEAYM+MV+ES
Sbjct: 216  AVREFQLQVQASLKRRKQRNDGVQAWHGRQRQRATRAEKLRFQALKADDQEAYMRMVKES 275

Query: 1002 KNERLTMLLGKTNDLLARLGAAVKKQKDAEHSAGIEVLEGLEAEEP 1139
            KNERLTMLL KTNDLL  LGAAV++QK AE S GIE L+  E + P
Sbjct: 276  KNERLTMLLKKTNDLLVDLGAAVQRQKGAEQSDGIETLKSPEPDLP 321


>ref|XP_003535660.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
          Length = 1072

 Score =  412 bits (1060), Expect = e-113
 Identities = 218/331 (65%), Positives = 252/331 (76%)
 Frame = +3

Query: 141  KTLIYALNLISRNLPLPPHVFDTVSSIYRSNDDGDSAFSDNGGDGALDDVENGDNCRVEE 320
            KTLI ALNL+SR+LPLPPH+ ++VSSIYR+N        D G  G               
Sbjct: 8    KTLICALNLLSRDLPLPPHILNSVSSIYRNN------HGDGGNSGE-------------- 47

Query: 321  NSHHPESSEMGDLVTEFEDVLLMQRSNCMSGMGLRTSRESRLQSHIQHRLNELEGLPSTR 500
                       DL+T+ ED L  QR NC+ G  L  SR++R +S IQHRLNEL+ LPS+R
Sbjct: 48   -----------DLMTDLEDALSKQRPNCVPGFKLEQSRDNRYRSLIQHRLNELQELPSSR 96

Query: 501  GEDLQMKCLLELYGLKLADLQNKVRADVSSEYWLREKCGYPDKQLFDWGMMRLHRPFILY 680
            GEDLQ KCLLELYGLKLA+LQ KVR+DVSSEYWL  KC YPD+QLFDWGMMRL RP  LY
Sbjct: 97   GEDLQTKCLLELYGLKLAELQMKVRSDVSSEYWLNAKCAYPDRQLFDWGMMRLRRP--LY 154

Query: 681  GMGDAFAMEADERQRKKRDTERLSRLEEEEKNRIETGKRKFFAEILNIAREFQLQGQASL 860
            G+GD FAM+AD++ +KKR+ ERLSRLEE+EKN IET  RKFFAEILN  REFQLQ QAS+
Sbjct: 155  GVGDPFAMDADDQLKKKREAERLSRLEEKEKNHIETRTRKFFAEILNTVREFQLQIQASV 214

Query: 861  KRRKQRNDGVQAWHARQRQRATRAEKLRFQALKADDQEAYMKMVEESKNERLTMLLGKTN 1040
            KRRKQRNDGVQAWH RQRQRATRAEKLRFQALKADDQEAYM+MV+ESKNERLT+LL +TN
Sbjct: 215  KRRKQRNDGVQAWHGRQRQRATRAEKLRFQALKADDQEAYMRMVKESKNERLTLLLEETN 274

Query: 1041 DLLARLGAAVKKQKDAEHSAGIEVLEGLEAE 1133
             LL  LGAAV++QKD ++S GIE LE  EA+
Sbjct: 275  KLLVNLGAAVQRQKDNKYSNGIEALEDSEAD 305


Top