BLASTX nr result

ID: Cimicifuga21_contig00022692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022692
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28924.3| unnamed protein product [Vitis vinifera]              147   5e-33
ref|XP_002272957.1| PREDICTED: uncharacterized protein LOC100246...   147   5e-33
ref|XP_002517981.1| micronuclear linker histone polyprotein, put...   144   3e-32
ref|XP_003540889.1| PREDICTED: uncharacterized protein LOC100791...   130   6e-28
ref|XP_002319377.1| predicted protein [Populus trichocarpa] gi|2...   126   6e-27

>emb|CBI28924.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  147 bits (370), Expect = 5e-33
 Identities = 88/199 (44%), Positives = 129/199 (64%), Gaps = 4/199 (2%)
 Frame = +1

Query: 325 HKLRERRIFTLLIQDKDQDLMTLHLLLQKERESGQEMQRKIEDLKAKAHSLRTRKMELSN 504
           HKLR+RRIF LL+++KD+  ++L LLLQKERES +E +RKIE+LKAK   L+++ MEL +
Sbjct: 4   HKLRDRRIFNLLVKEKDRQRISLQLLLQKERESTKEERRKIEELKAKILYLKSQNMELHS 63

Query: 505 KVAMMQSITSSLKEEVRALKSTLEEKQTKLKMLRDREIDSGKENSQIAALRELLKQKEDE 684
           +V  MQS  +SL++E + L+   +EKQT++KML++RE DS KEN +  AL+E+LK++E E
Sbjct: 64  RVMEMQSTIASLRDEHKTLEMAFDEKQTEIKMLQERETDSIKENPEAIALKEILKKREAE 123

Query: 685 IEELKRLVEKPTKLWSVSTDDPSNPPFNLTLPTN----EQSETRGSNDAGTKLVKAEVVD 852
           IE+LK  +            DPSNPP NLT   N    ++++ R   +    L +A   D
Sbjct: 124 IEDLKHHL------------DPSNPPVNLTARENMGWEDKTKAREGKEQNEHLHEA---D 168

Query: 853 SKNVGEGIHVGEKEKLENG 909
           S   G+ +  G+    ENG
Sbjct: 169 SNGNGQKLTGGDGS--ENG 185


>ref|XP_002272957.1| PREDICTED: uncharacterized protein LOC100246486 [Vitis vinifera]
          Length = 517

 Score =  147 bits (370), Expect = 5e-33
 Identities = 88/199 (44%), Positives = 129/199 (64%), Gaps = 4/199 (2%)
 Frame = +1

Query: 325 HKLRERRIFTLLIQDKDQDLMTLHLLLQKERESGQEMQRKIEDLKAKAHSLRTRKMELSN 504
           HKLR+RRIF LL+++KD+  ++L LLLQKERES +E +RKIE+LKAK   L+++ MEL +
Sbjct: 39  HKLRDRRIFNLLVKEKDRQRISLQLLLQKERESTKEERRKIEELKAKILYLKSQNMELHS 98

Query: 505 KVAMMQSITSSLKEEVRALKSTLEEKQTKLKMLRDREIDSGKENSQIAALRELLKQKEDE 684
           +V  MQS  +SL++E + L+   +EKQT++KML++RE DS KEN +  AL+E+LK++E E
Sbjct: 99  RVMEMQSTIASLRDEHKTLEMAFDEKQTEIKMLQERETDSIKENPEAIALKEILKKREAE 158

Query: 685 IEELKRLVEKPTKLWSVSTDDPSNPPFNLTLPTN----EQSETRGSNDAGTKLVKAEVVD 852
           IE+LK  +            DPSNPP NLT   N    ++++ R   +    L +A   D
Sbjct: 159 IEDLKHHL------------DPSNPPVNLTARENMGWEDKTKAREGKEQNEHLHEA---D 203

Query: 853 SKNVGEGIHVGEKEKLENG 909
           S   G+ +  G+    ENG
Sbjct: 204 SNGNGQKLTGGDGS--ENG 220


>ref|XP_002517981.1| micronuclear linker histone polyprotein, putative [Ricinus
           communis] gi|223542963|gb|EEF44499.1| micronuclear
           linker histone polyprotein, putative [Ricinus communis]
          Length = 602

 Score =  144 bits (363), Expect = 3e-32
 Identities = 83/194 (42%), Positives = 123/194 (63%)
 Frame = +1

Query: 325 HKLRERRIFTLLIQDKDQDLMTLHLLLQKERESGQEMQRKIEDLKAKAHSLRTRKMELSN 504
           HKLRERRIF LL+++KD  L++LHLLLQKE+E  +EM+RK E++KAK +SLR +KME   
Sbjct: 37  HKLRERRIFNLLVKEKDSQLISLHLLLQKEKEYNKEMKRKTEEMKAKIYSLRNQKMETER 96

Query: 505 KVAMMQSITSSLKEEVRALKSTLEEKQTKLKMLRDREIDSGKENSQIAALRELLKQKEDE 684
           ++  +QS   SLK+E++ ++S LEEKQ ++ +  +  +   KE +Q+ AL E LKQ+E E
Sbjct: 97  RILELQSTIDSLKDEMKIVESALEEKQNEINIHTETSMYPEKE-TQMIALMESLKQREAE 155

Query: 685 IEELKRLVEKPTKLWSVSTDDPSNPPFNLTLPTNEQSETRGSNDAGTKLVKAEVVDSKNV 864
           IE+LK  +E P K+ SVST DPSN        T   S   G++  G K    ++  S N 
Sbjct: 156 IEDLKSHLENPLKIPSVSTGDPSN--------TQLISNVTGNSADGDKTEDRQLHKSTNY 207

Query: 865 GEGIHVGEKEKLEN 906
            + ++     + +N
Sbjct: 208 SKYLNPTRGNESDN 221


>ref|XP_003540889.1| PREDICTED: uncharacterized protein LOC100791306 [Glycine max]
          Length = 515

 Score =  130 bits (326), Expect = 6e-28
 Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 14/215 (6%)
 Frame = +1

Query: 325 HKLRERRIFTLLIQDKDQDLMTLHLLLQKERESGQEMQRKIEDLKAKAHSLRTRKMELSN 504
           HKLRERRI+T+L+++KDQ ++ L LLLQKER+  +E++ K E++K K +SLR++KMEL+ 
Sbjct: 40  HKLRERRIYTILVKEKDQQILALQLLLQKERDGSKELRGKNEEMKGKLYSLRSQKMELAR 99

Query: 505 KVAMMQSITSSLKEEVRALKSTLEEKQTKLKMLRDREIDSGKENSQIAALRELLKQKEDE 684
            V  MQS   SLK+E + ++S  EE+Q +L++++++    G+  S+I ALR+ LK KE E
Sbjct: 100 TVVEMQSTLDSLKDEQKLMESEFEEQQNELRLMQEKGKSVGQGRSEIEALRDNLKHKEAE 159

Query: 685 IEELKRLVEKPTKLWSVSTDDPSNPPFNLTLP--------------TNEQSETRGSNDAG 822
           +E+LKR +E P        D P+  P  +T                + E ++  G  D  
Sbjct: 160 MEDLKRRLEIPV------NDHPTIFPEIVTANGTIAAQDENGKDEISGESAKHEGDTDNN 213

Query: 823 TKLVKAEVVDSKNVGEGIHVGEKEKLENGRSNAGE 927
              +K+E+   K+      + ++ +++     A E
Sbjct: 214 EGTIKSELTKFKDGEVATEIKDEIRIDRELGKANE 248


>ref|XP_002319377.1| predicted protein [Populus trichocarpa] gi|222857753|gb|EEE95300.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score =  126 bits (317), Expect = 6e-27
 Identities = 69/149 (46%), Positives = 98/149 (65%)
 Frame = +1

Query: 433 MQRKIEDLKAKAHSLRTRKMELSNKVAMMQSITSSLKEEVRALKSTLEEKQTKLKMLRDR 612
           M+RK E++KAK +SLR +KMEL  ++  MQS   S+K+E + ++S LEEKQ+++KMLR+ 
Sbjct: 1   MKRKTEEMKAKIYSLRIQKMELDRRLLEMQSTIGSMKDEQKIMESALEEKQSEIKMLRET 60

Query: 613 EIDSGKENSQIAALRELLKQKEDEIEELKRLVEKPTKLWSVSTDDPSNPPFNLTLPTNEQ 792
              + KE  Q+  LRE LKQKE EIE+LK  +E P K+WSVSTDDPS+P  N T   N  
Sbjct: 61  NKGAEKETLQMEVLRESLKQKEAEIEDLKHRLEYPAKIWSVSTDDPSSPSVNRTATLNMI 120

Query: 793 SETRGSNDAGTKLVKAEVVDSKNVGEGIH 879
           SE +   +AG    +  + +S N   G++
Sbjct: 121 SENK--IEAGKSEEEVLLQESANDSNGLN 147


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