BLASTX nr result

ID: Cimicifuga21_contig00022689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022689
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17513.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002266705.1| PREDICTED: nucleolar protein 6-like [Vitis v...    97   1e-18
emb|CAN72980.1| hypothetical protein VITISV_009031 [Vitis vinifera]    90   2e-16
ref|XP_004173722.1| PREDICTED: nucleolar protein 6-like [Cucumis...    87   1e-15
ref|XP_004173479.1| PREDICTED: nucleolar protein 6-like [Cucumis...    87   1e-15

>emb|CBI17513.3| unnamed protein product [Vitis vinifera]
          Length = 1066

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/78 (56%), Positives = 56/78 (71%)
 Frame = -2

Query: 252  CLIEDLQGEFQNTFKLWYDSLGGDAIGLTWNKSNSKKXXXXXXXXXXXXXXDILRDVGEI 73
            C I DL+ EF N FKLWYDSLGGDAIG+ W +S+SKK              ++L+ VGE+
Sbjct: 989  CFIGDLEEEFPNAFKLWYDSLGGDAIGMMWERSSSKKRGRSEENEEEKDPVNVLKAVGEV 1048

Query: 72   GKGFVRSVYLLKAPKIRN 19
            GKGFVRS+YLLK+P++RN
Sbjct: 1049 GKGFVRSIYLLKSPRLRN 1066


>ref|XP_002266705.1| PREDICTED: nucleolar protein 6-like [Vitis vinifera]
          Length = 1057

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/78 (56%), Positives = 56/78 (71%)
 Frame = -2

Query: 252  CLIEDLQGEFQNTFKLWYDSLGGDAIGLTWNKSNSKKXXXXXXXXXXXXXXDILRDVGEI 73
            C I DL+ EF N FKLWYDSLGGDAIG+ W +S+SKK              ++L+ VGE+
Sbjct: 980  CFIGDLEEEFPNAFKLWYDSLGGDAIGMMWERSSSKKRGRSEENEEEKDPVNVLKAVGEV 1039

Query: 72   GKGFVRSVYLLKAPKIRN 19
            GKGFVRS+YLLK+P++RN
Sbjct: 1040 GKGFVRSIYLLKSPRLRN 1057


>emb|CAN72980.1| hypothetical protein VITISV_009031 [Vitis vinifera]
          Length = 1040

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/77 (54%), Positives = 54/77 (70%)
 Frame = -2

Query: 249  LIEDLQGEFQNTFKLWYDSLGGDAIGLTWNKSNSKKXXXXXXXXXXXXXXDILRDVGEIG 70
            L + L  EF N FKLWYDSLGGDAIG+ W +S+SKK              ++L+ VGE+G
Sbjct: 964  LKDTLLEEFPNAFKLWYDSLGGDAIGMMWERSSSKKRGRSEENEEEKDPVNVLKAVGEVG 1023

Query: 69   KGFVRSVYLLKAPKIRN 19
            KGFVRS+YLLK+P++RN
Sbjct: 1024 KGFVRSIYLLKSPRLRN 1040


>ref|XP_004173722.1| PREDICTED: nucleolar protein 6-like [Cucumis sativus]
          Length = 167

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = -2

Query: 252 CLIEDLQGEFQNTFKLWYDSLGGDAIGLTWNKSNSKK-XXXXXXXXXXXXXXDILRDVGE 76
           C IEDLQ EF NTF LWYDSLGGDAIG+TW + +SKK               ++L+  GE
Sbjct: 89  CYIEDLQKEFSNTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGE 148

Query: 75  IGKGFVRSVYLLKAPKI 25
            GKG +RS+YLLKAP++
Sbjct: 149 TGKGLMRSIYLLKAPRL 165


>ref|XP_004173479.1| PREDICTED: nucleolar protein 6-like [Cucumis sativus]
          Length = 208

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = -2

Query: 252 CLIEDLQGEFQNTFKLWYDSLGGDAIGLTWNKSNSKK-XXXXXXXXXXXXXXDILRDVGE 76
           C IEDLQ EF NTF LWYDSLGGDAIG+TW + +SKK               ++L+  GE
Sbjct: 130 CYIEDLQKEFSNTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEVVAEEKEPAEVLKSAGE 189

Query: 75  IGKGFVRSVYLLKAPKI 25
            GKG +RS+YLLKAP++
Sbjct: 190 TGKGLMRSIYLLKAPRL 206


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