BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022688
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24510.3| unnamed protein product [Vitis vinifera]              379   e-103
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   379   e-103
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...   358   4e-97
ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec...   357   1e-96
ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation spec...   355   4e-96

>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  379 bits (973), Expect = e-103
 Identities = 187/235 (79%), Positives = 216/235 (91%), Gaps = 1/235 (0%)
 Frame = +3

Query: 3    VQKIPLKATPHQVAYFAEKSLYSLIVSVPVVKPLHQVLSSLLDQDAGHQMEHDNLIPDEL 182
            VQKIPLK TPHQV YFAEK+LY LIVSVPV+KPL+ VLSSL+DQ+AGHQ+E+DNL  DEL
Sbjct: 1012 VQKIPLKGTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVDQEAGHQLENDNLSSDEL 1071

Query: 183  HRTYTTDDFEVRIMEPDRPGAPWQTRTTILMQNSENALTVRMVTLFNTNTKENETLLAIG 362
            HR+Y+ D+FEVR++EP++ GAPWQTR TI MQ+SENALTVR+VTLFNT TKENETLLAIG
Sbjct: 1072 HRSYSVDEFEVRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIG 1131

Query: 363  TAYVQGEDVAARGRVLLFSFGRSTDNPQDVVSEVYSKELKGAISALASVQGYLLIAQGPK 542
            TAYVQGEDVAARGRVLLFS G++TDN Q++VSE+YSKELKGAISA+AS+QG+LLIA GPK
Sbjct: 1132 TAYVQGEDVAARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAVASLQGHLLIASGPK 1191

Query: 543  VILHKWTGADLIFVAFYDT-PLYVVSLNIVKNFILVGDIHKSIYFLSWKEQGAQL 704
            +ILHKWTG +L  VAF+D  PLYVVSLNIVKNFIL+GDIH+SIYFLSWKEQGAQL
Sbjct: 1192 IILHKWTGTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSIYFLSWKEQGAQL 1246


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Vitis vinifera]
          Length = 1442

 Score =  379 bits (973), Expect = e-103
 Identities = 187/235 (79%), Positives = 216/235 (91%), Gaps = 1/235 (0%)
 Frame = +3

Query: 3    VQKIPLKATPHQVAYFAEKSLYSLIVSVPVVKPLHQVLSSLLDQDAGHQMEHDNLIPDEL 182
            VQKIPLK TPHQV YFAEK+LY LIVSVPV+KPL+ VLSSL+DQ+AGHQ+E+DNL  DEL
Sbjct: 1006 VQKIPLKGTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVDQEAGHQLENDNLSSDEL 1065

Query: 183  HRTYTTDDFEVRIMEPDRPGAPWQTRTTILMQNSENALTVRMVTLFNTNTKENETLLAIG 362
            HR+Y+ D+FEVR++EP++ GAPWQTR TI MQ+SENALTVR+VTLFNT TKENETLLAIG
Sbjct: 1066 HRSYSVDEFEVRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIG 1125

Query: 363  TAYVQGEDVAARGRVLLFSFGRSTDNPQDVVSEVYSKELKGAISALASVQGYLLIAQGPK 542
            TAYVQGEDVAARGRVLLFS G++TDN Q++VSE+YSKELKGAISA+AS+QG+LLIA GPK
Sbjct: 1126 TAYVQGEDVAARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAVASLQGHLLIASGPK 1185

Query: 543  VILHKWTGADLIFVAFYDT-PLYVVSLNIVKNFILVGDIHKSIYFLSWKEQGAQL 704
            +ILHKWTG +L  VAF+D  PLYVVSLNIVKNFIL+GDIH+SIYFLSWKEQGAQL
Sbjct: 1186 IILHKWTGTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSIYFLSWKEQGAQL 1240


>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1447

 Score =  358 bits (920), Expect = 4e-97
 Identities = 181/235 (77%), Positives = 206/235 (87%), Gaps = 1/235 (0%)
 Frame = +3

Query: 3    VQKIPLKATPHQVAYFAEKSLYSLIVSVPVVKPLHQVLSSLLDQDAGHQMEHDNLIPDEL 182
            VQKIPLKATPHQV YFAEK+LY LIVS PV+KPL+QV+S L+DQD  HQ E  N+ PDE 
Sbjct: 1013 VQKIPLKATPHQVTYFAEKNLYPLIVSFPVLKPLNQVIS-LVDQDINHQNESQNMNPDEQ 1071

Query: 183  HRTYTTDDFEVRIMEPDRPGAPWQTRTTILMQNSENALTVRMVTLFNTNTKENETLLAIG 362
            +R Y  D+FEVRIMEP++ G PWQT+ TI MQ+SENALTVRMVTL NT +KENETLLAIG
Sbjct: 1072 NRFYPIDEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLVNTTSKENETLLAIG 1131

Query: 363  TAYVQGEDVAARGRVLLFSFGRSTDNPQDVVSEVYSKELKGAISALASVQGYLLIAQGPK 542
            TAYVQGEDVAARGR+LLFS G++TDNPQ +VSEVYSKELKGAISALAS+QG+LLIA GPK
Sbjct: 1132 TAYVQGEDVAARGRILLFSLGKNTDNPQTLVSEVYSKELKGAISALASLQGHLLIASGPK 1191

Query: 543  VILHKWTGADLIFVAFYDT-PLYVVSLNIVKNFILVGDIHKSIYFLSWKEQGAQL 704
            +ILHKW G +L  +AF+D  PL+VVSLNIVKNFIL+GDIHKSIYFLSWKEQGAQL
Sbjct: 1192 IILHKWNGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQL 1246


>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1449

 Score =  357 bits (917), Expect = 1e-96
 Identities = 181/235 (77%), Positives = 205/235 (87%), Gaps = 1/235 (0%)
 Frame = +3

Query: 3    VQKIPLKATPHQVAYFAEKSLYSLIVSVPVVKPLHQVLSSLLDQDAGHQMEHDNLIPDEL 182
            VQKIPLKATPHQV YFAEK+LY LIVS PV+KPL+QV+S L+DQD  HQ E  N+ PDE 
Sbjct: 1015 VQKIPLKATPHQVTYFAEKNLYPLIVSFPVLKPLNQVIS-LVDQDFNHQNESQNMNPDEQ 1073

Query: 183  HRTYTTDDFEVRIMEPDRPGAPWQTRTTILMQNSENALTVRMVTLFNTNTKENETLLAIG 362
            +R Y  D+FEVRIMEP++ G PWQT+ TI MQ+SENALTVRMVTL NT +KENETLLAIG
Sbjct: 1074 NRFYPIDEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLLNTTSKENETLLAIG 1133

Query: 363  TAYVQGEDVAARGRVLLFSFGRSTDNPQDVVSEVYSKELKGAISALASVQGYLLIAQGPK 542
            TAYVQGEDVAARGR+LLFS G+ TDNPQ +VSEVYSKELKGAISALAS+QG+LLIA GPK
Sbjct: 1134 TAYVQGEDVAARGRILLFSLGKITDNPQTLVSEVYSKELKGAISALASLQGHLLIASGPK 1193

Query: 543  VILHKWTGADLIFVAFYDT-PLYVVSLNIVKNFILVGDIHKSIYFLSWKEQGAQL 704
            +ILHKW G +L  +AF+D  PL+VVSLNIVKNFIL+GDIHKSIYFLSWKEQGAQL
Sbjct: 1194 IILHKWNGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQL 1248


>ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like, partial [Cucumis sativus]
          Length = 741

 Score =  355 bits (912), Expect = 4e-96
 Identities = 176/235 (74%), Positives = 205/235 (87%), Gaps = 1/235 (0%)
 Frame = +3

Query: 3    VQKIPLKATPHQVAYFAEKSLYSLIVSVPVVKPLHQVLSSLLDQDAGHQMEHDNLIPDEL 182
            VQK+PLK TPHQV YF EK+LY +I+S PV KPL+QVLSS++DQD GH +E+ NL  DEL
Sbjct: 307  VQKVPLKGTPHQVTYFHEKNLYPVIISAPVQKPLNQVLSSMVDQDVGH-VENHNLSADEL 365

Query: 183  HRTYTTDDFEVRIMEPDRPGAPWQTRTTILMQNSENALTVRMVTLFNTNTKENETLLAIG 362
             +TY+ ++FE+RI+EP++ G PWQTR TI M +SENALT+R+VTL NT TKENETLLA+G
Sbjct: 366  QQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVG 425

Query: 363  TAYVQGEDVAARGRVLLFSFGRSTDNPQDVVSEVYSKELKGAISALASVQGYLLIAQGPK 542
            TAYVQGEDVAARGRVLLFS G+  DN Q +VSEVYSKELKGAISALAS+QG+LLIA GPK
Sbjct: 426  TAYVQGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPK 485

Query: 543  VILHKWTGADLIFVAFYDT-PLYVVSLNIVKNFILVGDIHKSIYFLSWKEQGAQL 704
            +ILHKWTGA+L  +AFYD  PLYVVSLNIVKNFIL+GDIHKSIYFLSWKEQGAQL
Sbjct: 486  IILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQL 540