BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022683
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001428034.1| hypothetical protein [Paramecium tetraurelia...    65   1e-08
ref|XP_003970421.1| PREDICTED: pre-mRNA-splicing factor RBM22-li...    64   2e-08
ref|XP_002610351.1| hypothetical protein BRAFLDRAFT_145268 [Bran...    64   2e-08
ref|XP_004073359.1| PREDICTED: pre-mRNA-splicing factor RBM22-li...    64   2e-08
ref|XP_003200931.1| PREDICTED: pre-mRNA-splicing factor RBM22-li...    64   2e-08

>ref|XP_001428034.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
           gi|124395117|emb|CAK60636.1| unnamed protein product
           [Paramecium tetraurelia]
          Length = 344

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 9/79 (11%)
 Frame = +1

Query: 49  VCGKCLGRNFVAIRLVREPFHKDCKMCKLPFMAFKWI--SRSRNRKTKICHSCSESLNVC 222
           VC  CLG N   IR++++ F K+C++C  PF  FKW   + SR ++T+IC +C +  N+C
Sbjct: 25  VCNNCLGEN-PYIRMLKDRFGKECRICARPFTTFKWKPGNNSRQKQTEICQTCGKIKNIC 83

Query: 223 EVCGE-------VCSSDQF 258
           + C +       +C+ D+F
Sbjct: 84  QACFKDLEFNMGICTRDKF 102


>ref|XP_003970421.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Takifugu rubripes]
          Length = 426

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = +1

Query: 49  VCGKCLGRNFVAIRLVREPFHKDCKMCKLPFMAFKWI--SRSRNRKTKICHSCSESLNVC 222
           +C  CLG N   IR+ +E + K+CK+C  PF  F+W   SR R +KT++C +CS+  NVC
Sbjct: 23  LCQTCLGEN-PYIRMTKEKYGKECKICARPFTVFRWCPGSRMRFKKTEVCQTCSKIKNVC 81

Query: 223 EVC 231
           + C
Sbjct: 82  QTC 84


>ref|XP_002610351.1| hypothetical protein BRAFLDRAFT_145268 [Branchiostoma floridae]
           gi|229295716|gb|EEN66361.1| hypothetical protein
           BRAFLDRAFT_145268 [Branchiostoma floridae]
          Length = 435

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
 Frame = +1

Query: 49  VCGKCLGRNFVAIRLVREPFHKDCKMCKLPFMAFKWI--SRSRNRKTKICHSCSESLNVC 222
           +C  CLG N   IR+ +E F K+CK+C+ PF  F+W   +R R +KT++C +CS+  NVC
Sbjct: 23  LCQTCLGDN-PYIRMTKEKFGKECKICQRPFTVFRWCPGARMRFKKTEVCQTCSKLKNVC 81

Query: 223 EVC 231
           + C
Sbjct: 82  QTC 84


>ref|XP_004073359.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Oryzias latipes]
          Length = 426

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = +1

Query: 49  VCGKCLGRNFVAIRLVREPFHKDCKMCKLPFMAFKWI--SRSRNRKTKICHSCSESLNVC 222
           +C  CLG N   IR+ +E + K+CK+C  PF  F+W   +R R +KT++C +CS+  NVC
Sbjct: 23  LCQTCLGEN-PYIRMTKEKYGKECKICSRPFTVFRWCPGTRMRFKKTEVCQTCSKMKNVC 81

Query: 223 EVC 231
           + C
Sbjct: 82  QTC 84


>ref|XP_003200931.1| PREDICTED: pre-mRNA-splicing factor RBM22-like, partial [Danio
           rerio]
          Length = 407

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = +1

Query: 49  VCGKCLGRNFVAIRLVREPFHKDCKMCKLPFMAFKWIS--RSRNRKTKICHSCSESLNVC 222
           +C  CLG N   IR+ +E F K+CK+C  PF  F+W    R R +KT++C +CS+  NVC
Sbjct: 5   LCQTCLGEN-PYIRMTKEKFGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKMKNVC 63

Query: 223 EVC 231
           + C
Sbjct: 64  QTC 66