BLASTX nr result

ID: Cimicifuga21_contig00022668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022668
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|1...   263   2e-68
ref|XP_002273931.1| PREDICTED: transcription initiation factor T...   263   4e-68
ref|XP_002521322.1| protein with unknown function [Ricinus commu...   262   5e-68
ref|NP_001236385.1| uncharacterized protein LOC100306277 [Glycin...   258   1e-66
gb|AFK34960.1| unknown [Lotus japonicus]                              253   4e-65

>ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|118484348|gb|ABK94051.1|
           unknown [Populus trichocarpa]
           gi|222846845|gb|EEE84392.1| predicted protein [Populus
           trichocarpa]
          Length = 175

 Score =  263 bits (673), Expect = 2e-68
 Identities = 132/166 (79%), Positives = 143/166 (86%)
 Frame = -3

Query: 626 LPRDAKIVKSLLKSMGVREYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKPAIDCDDV 447
           +PRDAKIVKSLLKSMGV +YEPRV+HQFLELWYRYVVDVLTDAQVYSEHA K AIDCDDV
Sbjct: 8   MPRDAKIVKSLLKSMGVEDYEPRVVHQFLELWYRYVVDVLTDAQVYSEHANKTAIDCDDV 67

Query: 446 KLAIQTKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPDEDTLINPNYQIAI 267
           KLAIQ+KVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPP++DTLI+PNYQ+AI
Sbjct: 68  KLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPNYQLAI 127

Query: 266 PKKQPPQGVXXXXXXXEGAANPNPPHPQEQKTDQQQTTPQRVSFPL 129
           PKK+  Q +       E A   +P   QEQKTD  Q TPQRVSFPL
Sbjct: 128 PKKRTAQAIEETEEDEESA---DPNQSQEQKTDPPQLTPQRVSFPL 170


>ref|XP_002273931.1| PREDICTED: transcription initiation factor TFIID subunit 9B [Vitis
           vinifera] gi|297742999|emb|CBI35866.3| unnamed protein
           product [Vitis vinifera]
          Length = 177

 Score =  263 bits (671), Expect = 4e-68
 Identities = 136/171 (79%), Positives = 146/171 (85%), Gaps = 1/171 (0%)
 Frame = -3

Query: 626 LPRDAKIVKSLLKSMGVREYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKPAIDCDDV 447
           LPRDAKIVKSLLKSMGV +YEPRVIHQFLELWYRYVVDVLTDAQVYSEHA KPAIDCDDV
Sbjct: 8   LPRDAKIVKSLLKSMGVDDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKPAIDCDDV 67

Query: 446 KLAIQTKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPDEDTLINPNYQIAI 267
           KLAIQ+KVNFSFSQPP REVLLELARNRNKIPLPKSIAGPGIPLPP++DTLI+PNYQ+AI
Sbjct: 68  KLAIQSKVNFSFSQPPAREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPNYQLAI 127

Query: 266 PKKQPPQGVXXXXXXXEGAANPNPPH-PQEQKTDQQQTTPQRVSFPLVGKR 117
           PKK+  Q V       EGA   +P H  QE +TD  Q TPQRVSFP+  KR
Sbjct: 128 PKKRTAQAVEETEEDEEGA---DPSHASQEGRTDLPQHTPQRVSFPIGAKR 175


>ref|XP_002521322.1| protein with unknown function [Ricinus communis]
           gi|223539400|gb|EEF40990.1| protein with unknown
           function [Ricinus communis]
          Length = 175

 Score =  262 bits (670), Expect = 5e-68
 Identities = 134/166 (80%), Positives = 142/166 (85%)
 Frame = -3

Query: 626 LPRDAKIVKSLLKSMGVREYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKPAIDCDDV 447
           LPRDAKIVKSLLKSMGV +YEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGK AIDCDDV
Sbjct: 8   LPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKSAIDCDDV 67

Query: 446 KLAIQTKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPDEDTLINPNYQIAI 267
           KLAIQ+KVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPG+PLPP++DTLI+PNYQ+AI
Sbjct: 68  KLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGMPLPPEQDTLISPNYQLAI 127

Query: 266 PKKQPPQGVXXXXXXXEGAANPNPPHPQEQKTDQQQTTPQRVSFPL 129
           PKKQ  Q         E A   +P   QE KTD  Q TPQRVSFPL
Sbjct: 128 PKKQSVQATEETEEDEESA---DPNSSQEPKTDVPQGTPQRVSFPL 170


>ref|NP_001236385.1| uncharacterized protein LOC100306277 [Glycine max]
           gi|255628079|gb|ACU14384.1| unknown [Glycine max]
          Length = 177

 Score =  258 bits (659), Expect = 1e-66
 Identities = 131/166 (78%), Positives = 141/166 (84%)
 Frame = -3

Query: 626 LPRDAKIVKSLLKSMGVREYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKPAIDCDDV 447
           +PRDAKIVKSLLKSMGV +YEPRVIH+FLELWYRYVVDVLTDAQVYSEHAGKPAIDCDDV
Sbjct: 10  MPRDAKIVKSLLKSMGVEDYEPRVIHKFLELWYRYVVDVLTDAQVYSEHAGKPAIDCDDV 69

Query: 446 KLAIQTKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPDEDTLINPNYQIAI 267
           KLAIQ+KVNFSFSQPPPREVLLELA+NRNKIPLPK+IAGPGIPLPPD+DTLI+PNYQ AI
Sbjct: 70  KLAIQSKVNFSFSQPPPREVLLELAQNRNKIPLPKTIAGPGIPLPPDQDTLISPNYQFAI 129

Query: 266 PKKQPPQGVXXXXXXXEGAANPNPPHPQEQKTDQQQTTPQRVSFPL 129
           P K+P Q +         A  PNP   QEQK D Q    QRVSFPL
Sbjct: 130 PNKRPAQPLEETEDEE--ATIPNP--SQEQKVDTQPNPHQRVSFPL 171


>gb|AFK34960.1| unknown [Lotus japonicus]
          Length = 183

 Score =  253 bits (645), Expect = 4e-65
 Identities = 125/166 (75%), Positives = 140/166 (84%)
 Frame = -3

Query: 626 LPRDAKIVKSLLKSMGVREYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKPAIDCDDV 447
           +PRDAKIVKSLLKSMGV +YEPRVI +FLELWYRYVVDVLTDAQVYSEHA K AIDCDDV
Sbjct: 10  MPRDAKIVKSLLKSMGVEDYEPRVIQKFLELWYRYVVDVLTDAQVYSEHASKAAIDCDDV 69

Query: 446 KLAIQTKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPDEDTLINPNYQIAI 267
           KLAIQ+KVNFSFSQPPPREVLLELA+NRNKIPLPK+IAGPG+PLPPD+DTLI+PNYQ AI
Sbjct: 70  KLAIQSKVNFSFSQPPPREVLLELAQNRNKIPLPKTIAGPGVPLPPDQDTLISPNYQFAI 129

Query: 266 PKKQPPQGVXXXXXXXEGAANPNPPHPQEQKTDQQQTTPQRVSFPL 129
           P K+P + +          +NP+    QE+KTD QQ   QRVSFPL
Sbjct: 130 PNKRPAEPIEDTEVEEATTSNPS----QEEKTDVQQNPNQRVSFPL 171


Top