BLASTX nr result

ID: Cimicifuga21_contig00022618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022618
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28672.3| unnamed protein product [Vitis vinifera]              268   2e-69
ref|XP_003631855.1| PREDICTED: uncharacterized protein LOC100252...   224   5e-56
ref|XP_002525477.1| conserved hypothetical protein [Ricinus comm...   221   2e-55
gb|ABK94232.1| unknown [Populus trichocarpa]                          219   9e-55
ref|XP_002333313.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-50

>emb|CBI28672.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  268 bits (685), Expect = 2e-69
 Identities = 143/318 (44%), Positives = 208/318 (65%), Gaps = 7/318 (2%)
 Frame = +3

Query: 387  SSGGLTGRRGCRYVRLQFAEPNREVNEIVNSFPKSPWMSIGKEIQRDVLASFQNLRSEMC 566
            S G +  + G + + L  +   +E ++   +  KSPW+ + + +Q+D+L+ F+N+R+EM 
Sbjct: 86   SLGSIERKTGEKPLTLVDSRRGKENSDAGGNISKSPWVYVAENVQQDLLSYFENVRNEME 145

Query: 567  CDGSELIKPSFVVRFGLNVVFG---ISLDTIQSSSV-KTCLEQAGRSFQTNF---YVEPI 725
             +  E +KPS   +FG  +  G   +  ++++ + V +  L Q  R F TN    YV+ I
Sbjct: 146  VNNVEEVKPSLTAKFGKILFHGDPSVGTESVRKNLVTEVKLRQLKRQFYTNVPSSYVKNI 205

Query: 726  LDDVIPKLGVDFHTEKEYYHVKVLDKYRKRGNITCKCSINKVNGELDICKIELYQVRHLI 905
            +D V+PK+GV+F  EKE Y +K+ D  R    I+CKCS+ +   +L + KIEL QVRHL+
Sbjct: 206  IDGVVPKIGVNFEEEKELYQIKLSDITRPDSTISCKCSVTQDEKKLKLYKIELNQVRHLV 265

Query: 906  VDISYLDKYLDQRLMLSTKRIFNTLADDEKQCLRKLIKSAIIDPEMKGGLRWPLETESSG 1085
            +DIS LDK LD RLMLSTKRI  +L DDEKQ +  LI SAI+DP++KGGLRWP   ESSG
Sbjct: 266  IDISCLDKNLDLRLMLSTKRILTSLTDDEKQSISNLISSAILDPDVKGGLRWPFGKESSG 325

Query: 1086 NRYVVKGVLHTKSKAFINSSMRLKSSRVDRFNFRNCTGAVAEEVILEMTGIDRKLRDATV 1265
            +RY V GV H K+KA+ NSS+RL+    DRF+FR+  G VA E+ L+MTG+  +LR+  V
Sbjct: 326  DRYSVIGVWHIKAKAYTNSSVRLRVRDADRFDFRSSAGEVAREITLKMTGLVSQLREQKV 385

Query: 1266 EPGSVTGMVDDTLKLLWE 1319
            E  SV+  + DTLKL+W+
Sbjct: 386  EVESVSDQLKDTLKLVWD 403


>ref|XP_003631855.1| PREDICTED: uncharacterized protein LOC100252715 [Vitis vinifera]
          Length = 258

 Score =  224 bits (570), Expect = 5e-56
 Identities = 124/254 (48%), Positives = 165/254 (64%), Gaps = 7/254 (2%)
 Frame = +3

Query: 579  ELIKPSFVVRFGLNVVFG---ISLDTIQSSSV-KTCLEQAGRSFQTNF---YVEPILDDV 737
            E +KPS   +FG  +  G   +  ++++ + V +  L Q  R F TN    YV+ I+D V
Sbjct: 7    EEVKPSLTAKFGKILFHGDPSVGTESVRKNLVTEVKLRQLKRQFYTNVPSSYVKNIIDGV 66

Query: 738  IPKLGVDFHTEKEYYHVKVLDKYRKRGNITCKCSINKVNGELDICKIELYQVRHLIVDIS 917
            +PK+GV+F  EKE Y +K+ D  R    I+CKCSI            EL QVRHL++DIS
Sbjct: 67   VPKIGVNFEEEKELYQIKLSDITRPDSTISCKCSI------------ELNQVRHLVIDIS 114

Query: 918  YLDKYLDQRLMLSTKRIFNTLADDEKQCLRKLIKSAIIDPEMKGGLRWPLETESSGNRYV 1097
             LDK LD RLMLSTKRI  +L DDEKQ +  LI SAI+DP++KGGLRWP   ESSG+RY 
Sbjct: 115  CLDKNLDLRLMLSTKRILTSLTDDEKQSISNLISSAILDPDVKGGLRWPFGKESSGDRYS 174

Query: 1098 VKGVLHTKSKAFINSSMRLKSSRVDRFNFRNCTGAVAEEVILEMTGIDRKLRDATVEPGS 1277
            V GV H K+KA+ NSS+RL+    DRF+FR+  G VA E+ L+MTG+  +LR+  VE  S
Sbjct: 175  VIGVWHIKAKAYTNSSVRLRVRDADRFDFRSSAGEVAREITLKMTGLVSQLREQKVEVES 234

Query: 1278 VTGMVDDTLKLLWE 1319
            V+  + DTLKL+W+
Sbjct: 235  VSDQLKDTLKLVWD 248


>ref|XP_002525477.1| conserved hypothetical protein [Ricinus communis]
            gi|223535290|gb|EEF36967.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 388

 Score =  221 bits (564), Expect = 2e-55
 Identities = 121/294 (41%), Positives = 179/294 (60%), Gaps = 4/294 (1%)
 Frame = +3

Query: 450  NREVNEIVNSFPKSPWMSIGKEIQRDVLASFQNLRSEMCCDGSELIKPSFVVRFGLNVVF 629
            N + +E+  +  ++PW+ I + IQ+D+L+SF+ LR EM   G E +KP  V RFG     
Sbjct: 95   NEDNSELRENCLRTPWLIIAENIQQDLLSSFEILRKEMHYHGLEKVKPILVARFGKICFH 154

Query: 630  GISLDTIQSSSVKTCLEQAGRSFQTNF---YVEPILDDVIPKLGVDFHTEKEYYHVKVLD 800
            G+    +     +T L Q  RS  TN    Y+E ++D+VI  +GVDF  EK+ YHVK+ D
Sbjct: 155  GVQEKQVN----ETILRQLKRSLYTNIPASYMENVIDEVILNVGVDFEEEKDIYHVKLSD 210

Query: 801  KYRKRGNITCKCSINKVNGELDICKIELYQ-VRHLIVDISYLDKYLDQRLMLSTKRIFNT 977
              R    ++CKC +N         +++ Y+ VR ++ DIS LDK LD RLML +KRI   
Sbjct: 211  NRRPDSIVSCKCCVNTDK------RLQFYKAVRQMVADISCLDKNLDLRLMLCSKRILTA 264

Query: 978  LADDEKQCLRKLIKSAIIDPEMKGGLRWPLETESSGNRYVVKGVLHTKSKAFINSSMRLK 1157
              DDE + +  L+ SA++D ++KGGLRWPL   SSGNRY V GV HT ++++ +SS+RLK
Sbjct: 265  PTDDEIKSINDLVSSAVLDSDVKGGLRWPLGKTSSGNRYSVVGVWHTVARSYSSSSLRLK 324

Query: 1158 SSRVDRFNFRNCTGAVAEEVILEMTGIDRKLRDATVEPGSVTGMVDDTLKLLWE 1319
                DR +FR+ TG    E+ L++ GI  +L++   E  SV+ M+ D LKL+W+
Sbjct: 325  VRHADRCDFRSGTGEATMEIYLKLKGIVSELQEQGAESDSVSNMLKDNLKLIWD 378


>gb|ABK94232.1| unknown [Populus trichocarpa]
          Length = 437

 Score =  219 bits (559), Expect = 9e-55
 Identities = 121/286 (42%), Positives = 178/286 (62%), Gaps = 8/286 (2%)
 Frame = +3

Query: 486  KSPWMSIGKEIQRDVLASFQNLRSEMCCDGSELIKPSFVVRFG---LNVVFGISLDTIQS 656
            +SPW  I + +Q+++L+SF+ LR+EM   GSE IKP  V RFG       + + L+++  
Sbjct: 143  RSPWEIIAENVQQELLSSFEILRNEMDDQGSEKIKPELVARFGKFAFRGKYSMGLESVDK 202

Query: 657  SSVKTC-LEQAGRSFQTNF---YVEPILDDVIPKLGVDFHTEKEYYHVKVLDKYRKRGNI 824
              V+   L Q  +SF TN    Y+E I+D V+P +GVDF  EKE Y VK+ D  R    +
Sbjct: 203  IQVEEAILRQLDKSFYTNIPSSYMENIIDGVVPAIGVDFEEEKEVYTVKLSDNTRPDATV 262

Query: 825  TCKCSINKVNGELDICKIELYQVRHLIVDISYLDKYLDQRLMLSTKRIFNTLADDEKQCL 1004
             CKC + + + +L + K++L +VR L++D+S LDK LD RLML T RI   L D+E   L
Sbjct: 263  LCKCIVLE-DKKLHLYKVKLNKVRQLVIDVSCLDKNLDLRLMLCTSRIVTALTDEEMNSL 321

Query: 1005 RKLIKSAIIDPEMKGGLRWPL-ETESSGNRYVVKGVLHTKSKAFINSSMRLKSSRVDRFN 1181
            R LI SA++D +MKGGLRWPL E  SS  RY V GV HT +KA+ +SS RLK+   D +N
Sbjct: 322  RDLINSAVLDSDMKGGLRWPLGEEASSCGRYSVIGVWHTVTKAYKSSSFRLKARDADGYN 381

Query: 1182 FRNCTGAVAEEVILEMTGIDRKLRDATVEPGSVTGMVDDTLKLLWE 1319
            F+  TG    E+ L++  I  ++++   E  S++ M++D+  L+W+
Sbjct: 382  FKTGTGETLREIYLKLKRIVSEIQEPGAESDSISKMLEDSFSLIWD 427


>ref|XP_002333313.1| predicted protein [Populus trichocarpa] gi|222836187|gb|EEE74608.1|
            predicted protein [Populus trichocarpa]
          Length = 242

 Score =  204 bits (518), Expect = 5e-50
 Identities = 109/231 (47%), Positives = 151/231 (65%), Gaps = 3/231 (1%)
 Frame = +3

Query: 636  SLDTIQSSSVKTCLEQAGRSFQTNF---YVEPILDDVIPKLGVDFHTEKEYYHVKVLDKY 806
            S+D IQ    +  L Q  RS  TN    Y+E I+D V+P +GVDF  EK+ YHVK+ D  
Sbjct: 5    SVDKIQVE--EAILRQLRRSLYTNIPSSYMENIIDGVVPVIGVDFEEEKDVYHVKLSDNT 62

Query: 807  RKRGNITCKCSINKVNGELDICKIELYQVRHLIVDISYLDKYLDQRLMLSTKRIFNTLAD 986
            R    I+CKCS+ + N +L + K+EL  VR +++D+S LDK LD RLMLSTKRI  TL D
Sbjct: 63   RPDATISCKCSVLE-NKKLLLYKVELNPVRQMVIDVSCLDKNLDLRLMLSTKRILTTLTD 121

Query: 987  DEKQCLRKLIKSAIIDPEMKGGLRWPLETESSGNRYVVKGVLHTKSKAFINSSMRLKSSR 1166
            DE   +R LI SA++D +MKGGLRWPL   SSG RY V G  HT +KA+ +SS RLK   
Sbjct: 122  DEMNSIRDLINSAVLDSDMKGGLRWPLGKASSGGRYSVTGAWHTVTKAYKSSSFRLKVRD 181

Query: 1167 VDRFNFRNCTGAVAEEVILEMTGIDRKLRDATVEPGSVTGMVDDTLKLLWE 1319
             DRF+FR+  G  A E+ L++  I  ++++   E  S++ M++D+L+L+W+
Sbjct: 182  ADRFDFRSGAGEAAREIYLKLKRIVSEIQEPGAESDSISKMLEDSLRLIWD 232


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