BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022586
         (1313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   596   e-168
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              574   e-161
ref|XP_002518776.1| DNA repair and recombination protein RAD54B,...   568   e-160
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot...   567   e-159
ref|XP_003516779.1| PREDICTED: DNA repair and recombination prot...   563   e-158

>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 934

 Score =  596 bits (1536), Expect = e-168
 Identities = 314/447 (70%), Positives = 347/447 (77%), Gaps = 10/447 (2%)
 Frame = -2

Query: 1312 ALKKLCNHPKLIYDTIKSGSPGTSGFEDCIRFFPPEMFSGRSGSWTGGDGIWVELSGKMH 1133
            ALKKLCNHPKLIYDT+KSG+ GTSGFEDC+RFFPPEMFSGRSG+WTGG+GIWVELSGKMH
Sbjct: 480  ALKKLCNHPKLIYDTVKSGNQGTSGFEDCMRFFPPEMFSGRSGAWTGGEGIWVELSGKMH 539

Query: 1132 VXXXXXXXXXHKTDDRIVLVSNYTQTLDLFGQLCREKRYPFLRLDGTTSISKRQKLVNRF 953
            V          KTDDRIVLVSNYTQTLDLF QLCRE+RYP+LRLDGTTSI+KRQKLVNRF
Sbjct: 540  VLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSINKRQKLVNRF 599

Query: 952  NDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIY 773
            +D  KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIY
Sbjct: 600  SDPLKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIY 659

Query: 772  RFLSTGTIEEKVYQRQMSKEGLQKVIQQEQIESHTAQGNTLSTEDLRDLFTFHENSRSEI 593
            RFLSTGTIEEKV+QRQMSKEGLQKVIQQEQ +S   QGN LSTEDLRDLF+FHEN RSEI
Sbjct: 660  RFLSTGTIEEKVFQRQMSKEGLQKVIQQEQKDSLKTQGNFLSTEDLRDLFSFHENVRSEI 719

Query: 592  HEKMNCIRCRTCDLEINSSGNGRDTEAESNSGNEVCEAEEDDIGGFAAISSCLHKLKGSE 413
            HEKMNC RC+  D E   S    D     N G +  + + DDIGGFA I+ CLHKLK SE
Sbjct: 720  HEKMNCNRCQNYD-ERPESVREEDGFESKNEGCQSYQMDCDDIGGFAGITGCLHKLKRSE 778

Query: 412  KQLGTPLEEDLGSWGHHFSSTSVPDEIFQASAGDEVTFVFTNQVGGKLVPIESN-RSKPR 236
            KQ+GT LEEDLGSWGHHF STSVPD IFQASAGDEVTFVFTNQV GKLVP+ES  R+  +
Sbjct: 779  KQVGTALEEDLGSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQVDGKLVPVESKVRANMQ 838

Query: 235  EVEAHQGYSGGIKERPKNQRYTLLSPRPQLTPAISCISNTTLNKSPASCNPLQRGSIKL- 59
             VEA++  S   K     Q+ TLLS   Q  P +S   ++  + S +S  P     IK  
Sbjct: 839  GVEANKNQSD--KRGKLLQKPTLLSKHQQSAPPVSNKGDSITSISSSSSKPFHLAGIKSM 896

Query: 58   -----STSIPKKPRT---THLPLKRLS 2
                 + S+  KP+    + LPLKRLS
Sbjct: 897  RTSKGTPSVTLKPKLSIGSQLPLKRLS 923


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  574 bits (1479), Expect = e-161
 Identities = 304/437 (69%), Positives = 337/437 (77%), Gaps = 10/437 (2%)
 Frame = -2

Query: 1282 LIYDTIKSGSPGTSGFEDCIRFFPPEMFSGRSGSWTGGDGIWVELSGKMHVXXXXXXXXX 1103
            LIYDT+KSG+ GTSGFEDC+RFFPPEMFSGRSG+WTGG+GIWVELSGKMHV         
Sbjct: 668  LIYDTVKSGNQGTSGFEDCMRFFPPEMFSGRSGAWTGGEGIWVELSGKMHVLARLLAHLR 727

Query: 1102 HKTDDRIVLVSNYTQTLDLFGQLCREKRYPFLRLDGTTSISKRQKLVNRFNDTSKDEFVF 923
             KTDDRIVLVSNYTQTLDLF QLCRE+RYP+LRLDGTTSI+KRQKLVNRF+D  KDEFVF
Sbjct: 728  QKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSINKRQKLVNRFSDPLKDEFVF 787

Query: 922  LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEE 743
            LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEE
Sbjct: 788  LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEE 847

Query: 742  KVYQRQMSKEGLQKVIQQEQIESHTAQGNTLSTEDLRDLFTFHENSRSEIHEKMNCIRCR 563
            KV+QRQMSKEGLQKVIQQEQ +S   QGN LSTEDLRDLF+FHEN RSEIHEKMNC RC+
Sbjct: 848  KVFQRQMSKEGLQKVIQQEQKDSLKTQGNFLSTEDLRDLFSFHENVRSEIHEKMNCNRCQ 907

Query: 562  TCDLEINSSGNGRDTEAESNSGNEVCEAEEDDIGGFAAISSCLHKLKGSEKQLGTPLEED 383
              D E   S    D     N G +  + + DDIGGFA I+ CLHKLK SEKQ+GT LEED
Sbjct: 908  NYD-ERPESVREEDGFESKNEGCQSYQMDCDDIGGFAGITGCLHKLKRSEKQVGTALEED 966

Query: 382  LGSWGHHFSSTSVPDEIFQASAGDEVTFVFTNQVGGKLVPIESN-RSKPREVEAHQGYSG 206
            LGSWGHHF STSVPD IFQASAGDEVTFVFTNQV GKLVP+ES  R+  + VEA++  S 
Sbjct: 967  LGSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQVDGKLVPVESKVRANMQGVEANKNQSD 1026

Query: 205  GIKERPKNQRYTLLSPRPQLTPAISCISNTTLNKSPASCNPLQRGSIKL------STSIP 44
              K     Q+ TLLS   Q  P +S   ++  + S +S  P     IK       + S+ 
Sbjct: 1027 --KRGKLLQKPTLLSKHQQSAPPVSNKGDSITSISSSSSKPFHLAGIKSMRTSKGTPSVT 1084

Query: 43   KKPRT---THLPLKRLS 2
             KP+    + LPLKRLS
Sbjct: 1085 LKPKLSIGSQLPLKRLS 1101


>ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
            communis] gi|223542157|gb|EEF43701.1| DNA repair and
            recombination protein RAD54B, putative [Ricinus communis]
          Length = 940

 Score =  568 bits (1465), Expect = e-160
 Identities = 303/449 (67%), Positives = 339/449 (75%), Gaps = 13/449 (2%)
 Frame = -2

Query: 1312 ALKKLCNHPKLIYDTIKSGSPGTSGFEDCIRFFPPEMFSGRSGSWTGGDGIWVELSGKMH 1133
            ALKKLCNHPKLIYDTI+SG+PGTSGFEDCIRFFPP MFSGRSG+W+GGDG W+ELSGKMH
Sbjct: 488  ALKKLCNHPKLIYDTIRSGTPGTSGFEDCIRFFPPGMFSGRSGTWSGGDGSWIELSGKMH 547

Query: 1132 VXXXXXXXXXHKTDDRIVLVSNYTQTLDLFGQLCREKRYPFLRLDGTTSISKRQKLVNRF 953
            V          +TDDRIVLVSNYTQTLDLF QLCRE+RYP LRLDG TSI KRQKLVNRF
Sbjct: 548  VLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPHLRLDGATSIGKRQKLVNRF 607

Query: 952  NDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIY 773
            ND SKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR+WRDGQKKRVYIY
Sbjct: 608  NDQSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARIWRDGQKKRVYIY 667

Query: 772  RFLSTGTIEEKVYQRQMSKEGLQKVIQQEQIESHTAQGNTLSTEDLRDLFTFHENSRSEI 593
            RFLSTGTIEEKVYQRQMSKEGLQKVIQ EQ +S  ++GN LSTEDLRDLFTF+ + RSEI
Sbjct: 668  RFLSTGTIEEKVYQRQMSKEGLQKVIQHEQNDSTISEGNFLSTEDLRDLFTFYGDIRSEI 727

Query: 592  HEKMNCIRCRTCDLEINSSGNGRDTEAESNSGNEVCEAEED--DIGGFAAISSCLHKLKG 419
            HEKMNC RC   D  + S  +      E  S +  C+++E+  DIGGFA I+  LH+LK 
Sbjct: 728  HEKMNCDRCLFNDDGLESIMD------EDGSVSRRCKSDEEVFDIGGFAKIAGILHELKS 781

Query: 418  SEKQLGTPLEEDLGSWGHHFSSTSVPDEIFQASAGDEVTFVFTNQVGGKLVPIESNRS-K 242
            SEKQ+GTPLEEDLGSWGHHF STSVPD I QASAGDEVTFVFTNQV GKLVPIES  S K
Sbjct: 782  SEKQVGTPLEEDLGSWGHHFHSTSVPDAILQASAGDEVTFVFTNQVDGKLVPIESTASPK 841

Query: 241  PREVEAHQGYSGGIKERPKNQRYTLLSPRPQLTPAISCISNTTLNKSPASCNPLQ----- 77
              E++ +Q    G +   +  R   L    +L  +IS   ++      AS  PL+     
Sbjct: 842  MLEIKGNQNQHDGKENMSRTSR---LFQHQKLLQSISASRDSLEETLSASFKPLEGATVK 898

Query: 76   --RGSIKLSTSIPKKPRT---THLPLKRL 5
              R S+K +T    K R    T LP KR+
Sbjct: 899  RRRTSLKGTTDSTLKSRLSSGTQLPFKRV 927


>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
            sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
            repair and recombination protein RAD54-like [Cucumis
            sativus]
          Length = 928

 Score =  567 bits (1461), Expect = e-159
 Identities = 292/406 (71%), Positives = 322/406 (79%), Gaps = 3/406 (0%)
 Frame = -2

Query: 1312 ALKKLCNHPKLIYDTIKSGSPGTSGFEDCIRFFPPEMFSGRSGSWTGGDGIWVELSGKMH 1133
            ALKKLCNHPKLIYDTIKSGSPGTSG E CIRFFPPEMFSGRSG+WTGGDG WVELSGKMH
Sbjct: 479  ALKKLCNHPKLIYDTIKSGSPGTSGLESCIRFFPPEMFSGRSGAWTGGDGAWVELSGKMH 538

Query: 1132 VXXXXXXXXXHKTDDRIVLVSNYTQTLDLFGQLCREKRYPFLRLDGTTSISKRQKLVNRF 953
            V          +TDDRIVLVSNYTQTLDLF QLCRE+RYP+LRLDGTTSISKRQKLVNRF
Sbjct: 539  VLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNRF 598

Query: 952  NDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIY 773
            ND SKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV+IY
Sbjct: 599  NDLSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 658

Query: 772  RFLSTGTIEEKVYQRQMSKEGLQKVIQQEQIESHTAQGNTLSTEDLRDLFTFHENSRSEI 593
            RFLSTGTIEEKVYQRQMSKEGLQKVIQQE   + T Q N LS+EDLRDLF+FH+N RSEI
Sbjct: 659  RFLSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEI 718

Query: 592  HEKMNCIRCRTCDLEINSSGNGRDTEAESN-SGNEVCEAEE--DDIGGFAAISSCLHKLK 422
            HEKMNC RC+ C         GR  + + N S N  C++++   DIGGFA ++ CL KLK
Sbjct: 719  HEKMNCSRCQNC--------YGRPEDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLK 770

Query: 421  GSEKQLGTPLEEDLGSWGHHFSSTSVPDEIFQASAGDEVTFVFTNQVGGKLVPIESNRSK 242
             SE+Q+G+PLEEDLG+WGHHF ST+VPD I QASAGDEVTFVF+NQV GKLVP+ES  S 
Sbjct: 771  KSEQQVGSPLEEDLGNWGHHFDSTTVPDTILQASAGDEVTFVFSNQVDGKLVPVES-MSS 829

Query: 241  PREVEAHQGYSGGIKERPKNQRYTLLSPRPQLTPAISCISNTTLNK 104
            PR  +A    +     +   Q+  LLS   +  P  S  SN   NK
Sbjct: 830  PRMKDAEGNGNNSRLNQNSRQKPFLLSQHRK--PLQSITSNEDPNK 873


>ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
            max]
          Length = 894

 Score =  563 bits (1450), Expect = e-158
 Identities = 288/408 (70%), Positives = 317/408 (77%), Gaps = 6/408 (1%)
 Frame = -2

Query: 1312 ALKKLCNHPKLIYDTIKSGSPGTSGFEDCIRFFPPEMFSGRSGSWTGGDGIWVELSGKMH 1133
            ALKKLCNHPKLIYDTI+SGSPGTSGFEDCIRFFPPEM SGRSGSWTGG G WVELSGKMH
Sbjct: 470  ALKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGHGAWVELSGKMH 529

Query: 1132 VXXXXXXXXXHKTDDRIVLVSNYTQTLDLFGQLCREKRYPFLRLDGTTSISKRQKLVNRF 953
            V          +T+DRIVLVSNYTQTLDLF QLCRE+RYP LRLDG+TSISKRQKLVN F
Sbjct: 530  VLARLLAHLRQRTNDRIVLVSNYTQTLDLFAQLCRERRYPHLRLDGSTSISKRQKLVNCF 589

Query: 952  NDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIY 773
            ND SKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIY
Sbjct: 590  NDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIY 649

Query: 772  RFLSTGTIEEKVYQRQMSKEGLQKVIQQEQIESHTAQGNTLSTEDLRDLFTFHENSRSEI 593
            RFLS GTIEEKVYQRQMSKEGLQKVIQQEQ +S  AQGN LSTE+LRDLFTFHEN +SEI
Sbjct: 650  RFLSAGTIEEKVYQRQMSKEGLQKVIQQEQTDSLVAQGNLLSTENLRDLFTFHENIKSEI 709

Query: 592  HEKMNCIRCRTCDLEINSSGNGRDTEAESNSGNEVCEAEEDDIGGFAAISSCLHKLKGSE 413
            HE M C RC+T D         R TEA+S   +   + E  DIGGFA I+ CL  LK SE
Sbjct: 710  HENMQCSRCQTFD-------GPRSTEAQSTITDSESDEETSDIGGFAEIAGCLQNLKRSE 762

Query: 412  KQLGTPLEEDLGSWGHHFSSTSVPDEIFQASAGDEVTFVFTNQVGGKLVPIES------N 251
            KQ+G+PLEEDLGSWGHHF  TSVPD I QASAGDEVTFVFTNQV G+LVP+ES       
Sbjct: 763  KQVGSPLEEDLGSWGHHFFPTSVPDAILQASAGDEVTFVFTNQVNGRLVPVESIMSPKLQ 822

Query: 250  RSKPREVEAHQGYSGGIKERPKNQRYTLLSPRPQLTPAISCISNTTLN 107
            +  P++       +G  K  P    ++L +  P  + ++    N ++N
Sbjct: 823  QKDPKKELLKSKQNGKQKPTP----FSLHNRLPLQSASVGITKNISMN 866