BLASTX nr result

ID: Cimicifuga21_contig00022584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022584
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282259.1| PREDICTED: uncharacterized protein LOC100260...   131   9e-29
ref|XP_004156214.1| PREDICTED: transcription initiation factor T...   127   2e-27
ref|XP_004141587.1| PREDICTED: uncharacterized protein LOC101215...   127   2e-27
ref|XP_003552582.1| PREDICTED: uncharacterized protein LOC100815...   125   5e-27
emb|CBI21214.3| unnamed protein product [Vitis vinifera]              125   5e-27

>ref|XP_002282259.1| PREDICTED: uncharacterized protein LOC100260255 [Vitis vinifera]
          Length = 368

 Score =  131 bits (329), Expect = 9e-29
 Identities = 68/151 (45%), Positives = 96/151 (63%), Gaps = 4/151 (2%)
 Frame = -3

Query: 490 FQPTIAKISMAQICQSIGFTGSQSSALEALSTIATRYLEXXXXXXXXXXXXSGRTQCNLF 311
           F   ++KI++AQIC+S+GF G Q SAL+ALS IA RYL             +GRTQCN+F
Sbjct: 25  FGRAVSKIAVAQICESVGFEGFQDSALQALSNIAVRYLCDVGKTANFCANLAGRTQCNVF 84

Query: 310 DVIFALEDLNSIQGFEGATNLKKSVLKSGILREVMKFVRSVDEIPFAKPIPRRGLVKK-- 137
           DVI  LEDL S +GF GA+ + + ++ SG +RE++++V S  EIPFA+P+PR  +V+   
Sbjct: 85  DVIRGLEDLGSSEGFSGASGVDQCIVSSGTVREIVEYVNSAKEIPFAQPVPRFPVVRNCK 144

Query: 136 --SGFSQRGGEVQGFSHMPHWVPSLPEPSTY 50
               F Q G    G  H+P W+P+ P+  TY
Sbjct: 145 ATPSFVQMGETPVG-KHIPPWLPAFPDSHTY 174


>ref|XP_004156214.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
           [Cucumis sativus]
          Length = 261

 Score =  127 bits (318), Expect = 2e-27
 Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 4/167 (2%)
 Frame = -3

Query: 490 FQPTIAKISMAQICQSIGFTGSQSSALEALSTIATRYLEXXXXXXXXXXXXSGRTQCNLF 311
           F   +AKI++AQIC+S GF   Q SALE L+ +A RY++            +GRT+CNLF
Sbjct: 26  FPRALAKIAVAQICESEGFQIFQQSALETLADVAVRYVQNMGSTANFCANFAGRTECNLF 85

Query: 310 DVIFALEDLNSIQGFEGATNLKKSVLKSGILREVMKFVRSVDEIPFAKPIPRRGLVK--- 140
           D+I ALEDL S+QGF GA++++  +  S  ++E  ++V   +E+PFA  +P+  +VK   
Sbjct: 86  DIIQALEDLGSVQGFAGASDIEHCLASSSTVKEFARYVAQAEEVPFAYSVPKFPVVKERK 145

Query: 139 -KSGFSQRGGEVQGFSHMPHWVPSLPEPSTYNNVDVKVCKEDEEKSQ 2
            +  F Q G E  G  H+P W+P+LP+P TY  ++  + KE+  + Q
Sbjct: 146 LRPSFLQIGEEPPG-EHIPSWLPALPDPETY--IESPIVKEEVVEPQ 189


>ref|XP_004141587.1| PREDICTED: uncharacterized protein LOC101215115 [Cucumis sativus]
          Length = 376

 Score =  127 bits (318), Expect = 2e-27
 Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 4/167 (2%)
 Frame = -3

Query: 490 FQPTIAKISMAQICQSIGFTGSQSSALEALSTIATRYLEXXXXXXXXXXXXSGRTQCNLF 311
           F   +AKI++AQIC+S GF   Q SALE L+ +A RY++            +GRT+CNLF
Sbjct: 26  FPRALAKIAVAQICESEGFQIFQQSALETLADVAVRYVQNMGSTANFCANFAGRTECNLF 85

Query: 310 DVIFALEDLNSIQGFEGATNLKKSVLKSGILREVMKFVRSVDEIPFAKPIPRRGLVK--- 140
           D+I ALEDL S+QGF GA++++  +  S  ++E  ++V   +E+PFA  +P+  +VK   
Sbjct: 86  DIIQALEDLGSVQGFAGASDIEHCLASSSTVKEFARYVAQAEEVPFAYSVPKFPVVKERK 145

Query: 139 -KSGFSQRGGEVQGFSHMPHWVPSLPEPSTYNNVDVKVCKEDEEKSQ 2
            +  F Q G E  G  H+P W+P+LP+P TY  ++  + KE+  + Q
Sbjct: 146 LRPSFLQIGEEPPG-EHIPSWLPALPDPETY--IESPIVKEEVVEPQ 189


>ref|XP_003552582.1| PREDICTED: uncharacterized protein LOC100815889 [Glycine max]
          Length = 381

 Score =  125 bits (314), Expect = 5e-27
 Identities = 65/148 (43%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
 Frame = -3

Query: 478 IAKISMAQICQSIGFTGSQSSALEALSTIATRYLEXXXXXXXXXXXXSGRTQCNLFDVIF 299
           IAKI++AQ+C+  GF   Q SALEALS +  RY+             SGRT+CN FDVI 
Sbjct: 33  IAKIAVAQVCEGEGFQAFQQSALEALSDVVVRYILNVGKSAHCHANLSGRTECNAFDVIQ 92

Query: 298 ALEDLNSIQGFEGATNLKKSVLKSGILREVMKFVRSVDEIPFAKPIPRRGLVKK----SG 131
            LED+ S+QGF GA ++   +  SG++RE++ FV   + + FA PIPR  +VK+      
Sbjct: 93  GLEDMGSVQGFAGAADVDHCLESSGVIREIVHFVNDAEPVMFAHPIPRFPVVKERVPNPS 152

Query: 130 FSQRGGEVQGFSHMPHWVPSLPEPSTYN 47
           F Q+G E  G  H+P W+P+ P+P TY+
Sbjct: 153 FLQKGEEPPG-EHIPAWLPAFPDPQTYS 179


>emb|CBI21214.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  125 bits (314), Expect = 5e-27
 Identities = 67/157 (42%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
 Frame = -3

Query: 508 KPSSRLFQPTIAKISMAQICQSIGFTGSQSSALEALSTIATRYLEXXXXXXXXXXXXSGR 329
           K S R F   IAKI++AQIC+S GF G Q SALE LS +  RY+             + R
Sbjct: 19  KSSDRDFPQAIAKIAVAQICESAGFQGFQQSALETLSEVVVRYIRELGKTAHTYANSACR 78

Query: 328 TQCNLFDVIFALEDLNSIQGFEGATNLKKSVLKSGILREVMKFVRSVDEIPFAKPIPR-- 155
           T+CN+FD+I  LEDL S+QGF GA++    +  SG +RE++++V   +EIPFA  +P   
Sbjct: 79  TECNIFDIIQGLEDLASLQGFSGASDSDHCLAGSGTVREIVQYVSEAEEIPFAHSVPHFP 138

Query: 154 --RGLVKKSGFSQRGGEVQGFSHMPHWVPSLPEPSTY 50
             R   +   F Q G E  G  H+P W+P+ P+P TY
Sbjct: 139 VIRDRKQTPSFLQIGEEPPG-DHIPDWLPAFPDPQTY 174


Top