BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022552
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39775.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26
emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]   122   3e-26
ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containi...   108   3e-22
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   108   3e-22

>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  124 bits (310), Expect = 1e-26
 Identities = 67/139 (48%), Positives = 91/139 (65%), Gaps = 2/139 (1%)
 Frame = -3

Query: 415 EMVSCVCSLQVPPPPQATANQIQN--NNDIETVRNDLLHKFNTPFQLKQIHCHLLKTSNN 242
           +M+  + S  +P  P    NQI N      ET++ DLL  FN+PF+L+Q+H  ++KT+  
Sbjct: 33  KMLFALSSFPIPQSPNR--NQIHNVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKTNAP 90

Query: 241 KKYSSLLPLARVGSVCASSSADFDYARSIFQRHSLSPDETFLWNSCLKTLAEGDSPLDAL 62
               S+LPL RVG VCA + + F YA+ IF+       ETF+WNSCLK LAEGDSP+DA+
Sbjct: 91  L---SILPLTRVGLVCAFTPS-FHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAI 146

Query: 61  LLFSQLRHSDIPPDTFTCS 5
           +LF +LR  D+ PDTFTCS
Sbjct: 147 MLFYRLRQYDVCPDTFTCS 165


>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/128 (50%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
 Frame = -3

Query: 382 PPPPQATANQIQN--NNDIETVRNDLLHKFNTPFQLKQIHCHLLKTSNNKKYSSLLPLAR 209
           P P     NQI N      ET++ DLL  FN+PF+L+Q+H  ++KT+      S+LPL R
Sbjct: 9   PIPQSPNRNQIHNVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKTNAPL---SILPLTR 65

Query: 208 VGSVCASSSADFDYARSIFQRHSLSPDETFLWNSCLKTLAEGDSPLDALLLFSQLRHSDI 29
           VG VCA + + F YA+ IF+       ETF+WNSCLK LAEGDSP+DA++LF +LR  D+
Sbjct: 66  VGLVCAFTPS-FHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDV 124

Query: 28  PPDTFTCS 5
            PDTFTCS
Sbjct: 125 CPDTFTCS 132


>emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
          Length = 606

 Score =  122 bits (306), Expect = 3e-26
 Identities = 63/136 (46%), Positives = 86/136 (63%)
 Frame = -3

Query: 412 MVSCVCSLQVPPPPQATANQIQNNNDIETVRNDLLHKFNTPFQLKQIHCHLLKTSNNKKY 233
           M+  + S  +P  P             ET++ DLL  FN+PF+L+Q+H  ++KT+     
Sbjct: 1   MLFALSSFPIPQSPNRNQIHHVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKTNAPL-- 58

Query: 232 SSLLPLARVGSVCASSSADFDYARSIFQRHSLSPDETFLWNSCLKTLAEGDSPLDALLLF 53
            S+LPL RVG VCA + + F YA+ IF+       ETF+WNSCLK LAEGDSP+DA++LF
Sbjct: 59  -SILPLTRVGLVCAFTPS-FHYAQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLF 116

Query: 52  SQLRHSDIPPDTFTCS 5
            +LR  D+ PDTFTCS
Sbjct: 117 YRLRQYDVCPDTFTCS 132


>ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 583

 Score =  108 bits (271), Expect = 3e-22
 Identities = 60/104 (57%), Positives = 73/104 (70%)
 Frame = -3

Query: 313 LLHKFNTPFQLKQIHCHLLKTSNNKKYSSLLPLARVGSVCASSSADFDYARSIFQRHSLS 134
           LLH F +PF+LKQ+H HLLKT  N   SSL PL+RV SVCA +S+ F YA+ IFQ   L 
Sbjct: 21  LLHNFTSPFELKQLHAHLLKT--NSPLSSL-PLSRVASVCAFNSS-FSYAKLIFQL--LD 74

Query: 133 PDETFLWNSCLKTLAEGDSPLDALLLFSQLRHSDIPPDTFTCSF 2
             E   WN+CL++ AEGDSP DA+ LF +LR  DI PD +TCSF
Sbjct: 75  ASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSF 118


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  108 bits (271), Expect = 3e-22
 Identities = 60/104 (57%), Positives = 73/104 (70%)
 Frame = -3

Query: 313 LLHKFNTPFQLKQIHCHLLKTSNNKKYSSLLPLARVGSVCASSSADFDYARSIFQRHSLS 134
           LLH F +PF+LKQ+H HLLKT  N   SSL PL+RV SVCA +S+ F YA+ IFQ   L 
Sbjct: 21  LLHNFTSPFELKQLHAHLLKT--NSPLSSL-PLSRVASVCAFNSS-FSYAKLIFQL--LD 74

Query: 133 PDETFLWNSCLKTLAEGDSPLDALLLFSQLRHSDIPPDTFTCSF 2
             E   WN+CL++ AEGDSP DA+ LF +LR  DI PD +TCSF
Sbjct: 75  ASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSF 118