BLASTX nr result

ID: Cimicifuga21_contig00022483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022483
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD67842.1| ribosomal protein -like [Oryza sativa Japonica G...    68   8e-21
dbj|BAD23759.1| ribosomal protein-like [Oryza sativa Japonica Gr...    67   1e-20
gb|EEC75882.1| hypothetical protein OsI_12917 [Oryza sativa Indi...    67   1e-20
dbj|BAD88086.1| ribosomal protein-like [Oryza sativa Japonica Gr...    67   1e-20
gb|AAT93896.1| unknown protein [Oryza sativa Japonica Group]           67   1e-20

>dbj|BAD67842.1| ribosomal protein -like [Oryza sativa Japonica Group]
           gi|55296301|dbj|BAD68081.1| ribosomal protein -like
           [Oryza sativa Japonica Group]
          Length = 428

 Score = 67.8 bits (164), Expect(2) = 8e-21
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
 Frame = -1

Query: 359 FVMGYYVA---------LIPSIYAPHGRT*ILFMTKQEVVRKDIERAFARLQSK*AILSH 207
           ++MGYY+A          + +I  PHG     F   QE VRKD+ERAF  LQ++ AI+  
Sbjct: 280 YMMGYYLADGIYPSWATFVKTIPEPHGNKRKYFAKAQEAVRKDVERAFGVLQARFAIVRG 339

Query: 206 HACRWKLTKLMMTMKSCTILHNMIIHDE 123
            A  W    L   MK+C I+HNMII DE
Sbjct: 340 PARHWNEKTLGYIMKACVIMHNMIIEDE 367



 Score = 57.8 bits (138), Expect(2) = 8e-21
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = -2

Query: 568 GHVKESTLILEAMASRDF*KRHSFFGRVGSHNDINILEFSQIFNNYLNLVAPPRLYHMN 392
           GHV E T+ILEA+AS+D    H+FFG  GSHNDIN+L  S +F       AP   Y +N
Sbjct: 218 GHVHEPTIILEAVASKDLWIWHAFFGMPGSHNDINVLHRSPLFAKLAEGKAPEVNYSIN 276


>dbj|BAD23759.1| ribosomal protein-like [Oryza sativa Japonica Group]
          Length = 916

 Score = 67.4 bits (163), Expect(2) = 1e-20
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
 Frame = -1

Query: 359  FVMGYYVA---------LIPSIYAPHGRT*ILFMTKQEVVRKDIERAFARLQSK*AILSH 207
            ++MGYY+A          + +I  PHG     F   QE VRKD+ERAF  LQ++ AI+  
Sbjct: 768  YMMGYYLADGIYPSWATFVKTIPEPHGNKRKYFAKAQEAVRKDVERAFGVLQARFAIVRG 827

Query: 206  HACRWKLTKLMMTMKSCTILHNMIIHDE 123
             A  W    L   MK+C I+HNMII DE
Sbjct: 828  PARHWDEKTLGYIMKACVIMHNMIIEDE 855



 Score = 57.8 bits (138), Expect(2) = 1e-20
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = -2

Query: 568 GHVKESTLILEAMASRDF*KRHSFFGRVGSHNDINILEFSQIFNNYLNLVAPPRLYHMN 392
           GHV E T+ILEA+AS+D    H+FFG  GSHNDIN+L  S +F       AP   Y +N
Sbjct: 706 GHVHEPTIILEAVASKDLWIWHAFFGMPGSHNDINVLHRSPLFAKLAEGKAPEVNYSIN 764


>gb|EEC75882.1| hypothetical protein OsI_12917 [Oryza sativa Indica Group]
          Length = 380

 Score = 67.4 bits (163), Expect(2) = 1e-20
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
 Frame = -1

Query: 359 FVMGYYVA---------LIPSIYAPHGRT*ILFMTKQEVVRKDIERAFARLQSK*AILSH 207
           ++MGYY+A          + +I  PHG     F   QE VRKD+ERAF  LQ++ AI+  
Sbjct: 232 YMMGYYLADGIYPSWATFVKTIPEPHGNKRKYFAKAQEAVRKDVERAFGVLQARFAIVRG 291

Query: 206 HACRWKLTKLMMTMKSCTILHNMIIHDE 123
            A  W    L   MK+C I+HNMII DE
Sbjct: 292 PARHWDEKTLGYIMKACVIMHNMIIEDE 319



 Score = 57.8 bits (138), Expect(2) = 1e-20
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = -2

Query: 568 GHVKESTLILEAMASRDF*KRHSFFGRVGSHNDINILEFSQIFNNYLNLVAPPRLYHMN 392
           GHV E T+ILEA+AS+D    H+FFG  GSHNDIN+L  S +F       AP   Y +N
Sbjct: 170 GHVHEPTIILEAVASKDLWIWHAFFGMPGSHNDINVLHRSPLFAKLAEGKAPEVNYSIN 228


>dbj|BAD88086.1| ribosomal protein-like [Oryza sativa Japonica Group]
           gi|57900542|dbj|BAD88282.1| ribosomal protein-like
           [Oryza sativa Japonica Group]
          Length = 301

 Score = 67.4 bits (163), Expect(2) = 1e-20
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
 Frame = -1

Query: 359 FVMGYYVA---------LIPSIYAPHGRT*ILFMTKQEVVRKDIERAFARLQSK*AILSH 207
           ++MGYY+A          + +I  PHG     F   QE VRKD+ERAF  LQ++ AI+  
Sbjct: 153 YMMGYYLADGIYPSWATFVKTIPEPHGNKRKYFAKAQEAVRKDVERAFGVLQARFAIVRG 212

Query: 206 HACRWKLTKLMMTMKSCTILHNMIIHDE 123
            A  W    L   MK+C I+HNMII DE
Sbjct: 213 PARHWDEKTLGYIMKACVIMHNMIIEDE 240



 Score = 57.8 bits (138), Expect(2) = 1e-20
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = -2

Query: 568 GHVKESTLILEAMASRDF*KRHSFFGRVGSHNDINILEFSQIFNNYLNLVAPPRLYHMN 392
           GHV E T+ILEA+AS+D    H+FFG  GSHNDIN+L  S +F       AP   Y +N
Sbjct: 91  GHVHEPTIILEAVASKDLWIWHAFFGMPGSHNDINVLHRSPLFAKLAEGKAPEVNYSIN 149


>gb|AAT93896.1| unknown protein [Oryza sativa Japonica Group]
          Length = 446

 Score = 67.0 bits (162), Expect(2) = 1e-20
 Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
 Frame = -1

Query: 359 FVMGYYVA---------LIPSIYAPHGRT*ILFMTKQEVVRKDIERAFARLQSK*AILSH 207
           ++MGYY+A          + +I  PHG     F   QE +RKD+ERAF  LQ++ AI+  
Sbjct: 298 YMMGYYLADGIYPSWATFVKTIPEPHGNKRKYFAKAQEAIRKDVERAFGVLQARFAIVRG 357

Query: 206 HACRWKLTKLMMTMKSCTILHNMIIHDE 123
            A  W    L   MK+C I+HNMII DE
Sbjct: 358 PARHWDEKTLGYIMKACVIMHNMIIEDE 385



 Score = 57.8 bits (138), Expect(2) = 1e-20
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = -2

Query: 568 GHVKESTLILEAMASRDF*KRHSFFGRVGSHNDINILEFSQIFNNYLNLVAPPRLYHMN 392
           GHV E T+ILEA+AS+D    H+FFG  GSHNDIN+L  S +F       AP   Y +N
Sbjct: 236 GHVHEPTIILEAVASKDLWIWHAFFGMPGSHNDINVLHRSPLFAKLAEGKAPEVNYSIN 294


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