BLASTX nr result
ID: Cimicifuga21_contig00022476
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00022476
(1069 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176803.1| putative F-box/FBD/LRR-repeat protein [Arabidop... 79 2e-12
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g... 79 2e-12
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein... 78 4e-12
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 78 4e-12
ref|NP_191802.1| F-box protein [Arabidopsis thaliana] gi|7526448... 77 6e-12
>ref|NP_176803.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
gi|75262213|sp|Q9C8Y8.1|FDL7_ARATH RecName: Full=Putative
F-box/FBD/LRR-repeat protein At1g66290
gi|12324394|gb|AAG52161.1|AC020665_6 hypothetical
protein; 16490-14953 [Arabidopsis thaliana]
gi|332196370|gb|AEE34491.1| putative F-box/FBD/LRR-repeat
protein [Arabidopsis thaliana]
Length = 453
Score = 79.0 bits (193), Expect = 2e-12
Identities = 98/332 (29%), Positives = 151/332 (45%), Gaps = 9/332 (2%)
Frame = +1
Query: 61 LFTSKSLTNLKLTFPENISENKAILPNQMSLSSLRTLHLISIDFSLNGEFFDNLFLGCPA 240
++ +SL +LKL SE P +SL SL+ L L ++F N FD L GCP
Sbjct: 147 IYNCESLVSLKL------SEVTLTKPEFVSLPSLKVLVLDWVEF-YNEFAFDMLMSGCPV 199
Query: 241 LETLILVGCNFLNSKVLTTSPQLKHLVVEMCSMVCDGKENFVV--SAPNLVNFSWRDLMW 414
LE+ L N +VL Q S +++ VV AP L +
Sbjct: 200 LESFTLCRRYLDNVRVLRVISQSLLSFNYYGSSSKSFRDDLVVILDAPKLEKLKLSHQLT 259
Query: 415 ADFSLESLCSLEVAKVDIEVEYS-GESHLPILGDGAANRMIK-CLKELHNVKYLTLSASF 588
A F +E+L SL A +DIE + G+ P D MI+ L L VK +T++A
Sbjct: 260 ASFIIENLSSLVEADIDIEFNFCRGKKFDP--DDLPKREMIRNFLVGLSRVKTMTIAACT 317
Query: 589 LQVISELPSELENWPTPFSNLRHLHLETWLTRGCFRAIMFLLARALNVETLVLGMDPTEV 768
L+VI + S E P F NL +E + R + + F N+++LVL D
Sbjct: 318 LEVIYDY-SRCEPLPL-FPNLSFFSVEFYQKR--WEILPFFFKSCSNLKSLVLESDYFPR 373
Query: 769 DSANVVGYGVEPSLKSKLCRLKCVEFRKV--AGCSSELEYMKVLLENAVALKKMTI---F 933
+++ EP C L +E+ K+ A ++E ++ LLEN+ LKK+T+
Sbjct: 374 KRTSIIS---EPR-----CLLSSLEYVKIEFALDKGKMELVRYLLENSPILKKLTLSLDH 425
Query: 934 TSRKQAATDERLFKVFSEEVLTLPRASSDVTI 1029
+SRK++ V E++T+PR S+ +
Sbjct: 426 SSRKKSC-------VILRELITIPRCSTSCRV 450
>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
gi|222873903|gb|EEF11034.1| f-box family protein
[Populus trichocarpa]
Length = 453
Score = 79.0 bits (193), Expect = 2e-12
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 17/241 (7%)
Frame = +1
Query: 1 VQQLHLHFHPRDQVFEFPHCLFTSKSLTNLKLTFPENISENKAILPNQMSLSSLRTLHLI 180
V+++ ++ D P C F +SL +LKL ++ LP + L SL+TLHL
Sbjct: 144 VEEISINTAHWDVPIVLPRCFFDCESLRSLKLKVDGGLA-----LPKSLGLQSLKTLHLG 198
Query: 181 SIDFSLNGEFFDNLFLGCPALETLIL--VGCNFL-NSKVLTTSPQLKHLVVEMCSMVCDG 351
F +F CP LE L + + N + N + S + ++ + + G
Sbjct: 199 GAQ-----NFDGKIFSSCPNLENLTIEDICLNVIENFNIHALSLKSLEILNWRYNRIKQG 253
Query: 352 KENFVVSAPNLVNFSW---RDLMWADFSLESLCSLEVAK-----------VDIEVEYSGE 489
+ +V AP L +F + L W+D +L SL + V +E EY E
Sbjct: 254 CKVMLV-APKLTSFKFDGNTPLFWSDVNLTSLDDVNVVLQRYHHSHNYPFYVVEDEYISE 312
Query: 490 SHLPILGDGAANRMIKCLKELHNVKYLTLSASFLQVISELPSELENWPTPFSNLRHLHLE 669
G G +IK L + + K LTLS + ++++SE+P+ L+ P+PFSNL++L L+
Sbjct: 313 EDETEQGLGL--NLIKMLHQFCSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLKLK 370
Query: 670 T 672
T
Sbjct: 371 T 371
>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
vinifera]
Length = 610
Score = 77.8 bits (190), Expect = 4e-12
Identities = 102/372 (27%), Positives = 165/372 (44%), Gaps = 34/372 (9%)
Frame = +1
Query: 1 VQQLHLHFH--------PRDQVFEFPHCLFTSKSLTNLKLTFPENISENKAILPNQMSLS 156
V++LHL F P D P L+ + S+ L L F NI I S
Sbjct: 172 VEELHLQFRVGQHIRSSPMDYAHALPQFLYANSSIVKLSLWFC-NIKPTWVI-----SWP 225
Query: 157 SLRTLHLISIDFSLNGEFFDNLFLGCPALETLILVGCNFLNSKVLTTSPQLKHLVVEMC- 333
SL+TL + S++ L + + + GCPALE+L L C +NS + TS LK LV+
Sbjct: 226 SLKTLSIGSVE--LCDDLIEEILSGCPALESLELHHCFGINS-LNITSASLKKLVINRYW 282
Query: 334 -SMVCDGKENFVVSAPNLVNFSWRDLMWA-DFSLESLCSLEVAKVDIEV---EYSGESHL 498
S + +SAPN+ + M+ + ++++ SL A ++ E+ E + + H
Sbjct: 283 DSSHSHHRSVLKISAPNVQSLGILGNMYTKECRVKNVPSLFDASLNFELAMQEGNPKDHY 342
Query: 499 PILGDGAANRMIKCLKELHNVKYLTLSASFLQVISELPSELENWPTPFSNLRHLHLETWL 678
+ ++K LK +++VK LT+ +QV+S E ++ + SNL+ L L+T L
Sbjct: 343 KLY----HKVVMKLLKSVNHVKALTVGTWCIQVLSIF--EGKDLSSLLSNLKCLILDTHL 396
Query: 679 TRGCFRAIMFLLARALNVETLVLGM-DPTEVDSANVVGYGV---------------EPSL 810
+ I LL + ++ET V+ M P + VG+ E L
Sbjct: 397 NKWDLPGIANLLQSSTHLETFVINMISPCSQQISVEVGFSFTDLHNFDEEKYWSSREGVL 456
Query: 811 KSKLCRLKCVEFRKV----AGCSSELEYMKVLLENAVALKKMTIFTSRKQAATDERLFKV 978
+ L LK V+ V G +K LL+NA L+K+ I R +
Sbjct: 457 ANSLINLKTVKIIGVIWNQPGIELVFGLVKFLLKNARMLEKVEICAKRDSQSRSRWSSLN 516
Query: 979 FSEEVLTLPRAS 1014
++ +L+ PRAS
Sbjct: 517 SAQSLLSFPRAS 528
>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
predicted protein [Populus trichocarpa]
Length = 460
Score = 77.8 bits (190), Expect = 4e-12
Identities = 91/352 (25%), Positives = 159/352 (45%), Gaps = 7/352 (1%)
Frame = +1
Query: 1 VQQLHLHFHPRDQVFEFPHCLFTSKSLTNLKLTFPENISENKAILPNQMSLSSLRTLHLI 180
V+ L+L + F PHCLF ++LT L++ P + LP+ +SLS L+ L+L
Sbjct: 125 VKDLYLELRDFEASFVLPHCLFNCETLTELEINMPYILK-----LPSSISLSCLKILNLY 179
Query: 181 SIDFSLNGEFFDNLFLGCPALETLILVGCNFLNSKVLTTS-PQLKHL-VVEMC--SMVCD 348
+ F+ + P L L + CN++N ++ S P+L+ L + E C S
Sbjct: 180 EVIFT--DDHSTQQLFSLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASL 237
Query: 349 GKENFVVSAPNLVNFSWRDLMWADFSLESLCSLEVAKVDIEVEYSGESHLPILGDGAANR 528
G + + +L +F+ + D+ C E + V+ + + P A R
Sbjct: 238 GGCHVRIFGTHLADFTIIGTLSNDY-----CLYESSVVETCISIFSAADKP---RQTAYR 289
Query: 529 MIKCLKELHNVKYLTLSASFLQVISELPSELENWPTPFSNLRHLHLETWLTRGCFRAIMF 708
K L+ + + + L L+ + + V+ + P EL +P F NL L E+ +
Sbjct: 290 ASKLLEGISSAQSLCLTTNVVDVLDDAP-ELLAFPLEFRNLTSLLFESEESNLHSDGFWH 348
Query: 709 LLARALNVETL-VLGMDPTEVDSANVVGYGVEPSLKSKLCRLKCVEFRKVAGCSSELEYM 885
++ + ++ L G+ +V S + ++PS L LK ++ + G EL+ +
Sbjct: 349 IIYNSPHLIALQFYGVSMPKVPSNCREDWTLDPSPPCFLSCLKFIQVGRFGGDEKELDAV 408
Query: 886 KVLLENAVALKKMTIFTSRKQAATDERLFKV--FSEEVLTLPRASSDVTINF 1035
LL+NA AL+ M I S A D+ + K +++L LPR S INF
Sbjct: 409 GFLLKNATALESMDIIYS-GSARRDQGVDKTNEIHQQLLALPRWSEIGNINF 459
>ref|NP_191802.1| F-box protein [Arabidopsis thaliana]
gi|75264480|sp|Q9LZP7.1|FB216_ARATH RecName: Full=F-box
protein At3g62430 gi|7340714|emb|CAB82957.1| putative
protein [Arabidopsis thaliana]
gi|332646831|gb|AEE80352.1| F-box protein [Arabidopsis
thaliana]
Length = 437
Score = 77.4 bits (189), Expect = 6e-12
Identities = 91/347 (26%), Positives = 154/347 (44%), Gaps = 15/347 (4%)
Frame = +1
Query: 43 FEFPHCLFTSKSLTNLKLTFPENISENKAILPNQMSLSSLRTLHLISIDFSLN---GEFF 213
+ P +FT KS+ +KL I ILP L +L+TL L ++ F + G F
Sbjct: 118 YSLPSEIFTCKSVVKMKLGSGFVID----ILPKNAWLPALKTLLLDTVRFEFDNTAGCSF 173
Query: 214 DNLFLGCPALETLILVGCNFLNSKVL--TTSPQLKHLVVEMCSMVCDGK--ENFVVSAPN 381
L CP LE L++ G N + K +S LK L + V DG E + P+
Sbjct: 174 TKLISACPVLEELVIDGHNCEDWKWSRRVSSQILKRLTIRRKEWVHDGSSFEPISLDIPS 233
Query: 382 LVNFSWRDLMWADFSLESLCSLEVAKVDIEVEYSGESHLPILGDGAANRMIKCLKELHNV 561
L F + D + + + L SL AK+++ Y G+++ + +K L NV
Sbjct: 234 LEYFKYFDTLRDSYPVVKLNSLVEAKLELPSLYIGDTY----------NVRNLIKGLKNV 283
Query: 562 KYLTLSASFLQVISELPSELENWPTPFSNLRHLHLETWLTRGCFRAIMFLLARALNVETL 741
+ L L A + + E F NL HL + T C+ + LL ++ N++TL
Sbjct: 284 QILRLGAVDTMHLFWVFREAV---PVFENLFHLSVSTH-DAICWDDLRILLEKSPNLKTL 339
Query: 742 VLGMDPTEVDSANVVGYGVEPSLKSKL--------CRLKCVEFRKVAGCSSELEYMKVLL 897
+++ + GYG E S+ L C ++ ++ + G E+E ++ +L
Sbjct: 340 T-------IEALHYHGYGDENSVCECLDGYSFLLSCPIEILKITEFGGEIEEMEQVEYVL 392
Query: 898 ENAVALKKMTIFTSRKQAATDERLFKVFSEEVLTLPRASSDVTINFR 1038
EN + L + I K+ +R ++ + ++L LPRASS + +
Sbjct: 393 ENLLCLVLLEIHVKTKKI---DRKLQILA-DLLMLPRASSKCKVQVK 435