BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022468
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18867.3| unnamed protein product [Vitis vinifera]              239   2e-61
ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containi...   239   2e-61
ref|XP_002889073.1| pentatricopeptide repeat-containing protein ...   222   4e-56
ref|NP_177755.3| pentatricopeptide repeat-containing protein [Ar...   218   4e-55
ref|NP_001185409.1| pentatricopeptide repeat-containing protein ...   218   4e-55

>emb|CBI18867.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  239 bits (610), Expect = 2e-61
 Identities = 124/189 (65%), Positives = 150/189 (79%)
 Frame = -3

Query: 568 NLKPTNSILGTLSIACSQXXXXXXXXXLVDQIVKSSWRLPFNALLAAYDAMDQPERAVRL 389
           NLKP +S L  LSI  S+         L+DQI + S+  PFNA LAA D +DQPERAV +
Sbjct: 393 NLKPYDSTLAALSIGSSKALQLDLAESLLDQISRISYVHPFNAFLAACDTLDQPERAVPI 452

Query: 388 LAKMKQLKLKSDSRTYELLFSLFGNVNAPYEKGDTMSQVDVAKRINAIEMDMVKNGVQHN 209
           L+KMKQLKL+ +  TYELLFSLFGNVNAPYE+G+ +SQVDVA+RI AIEMDM+ NG+QH+
Sbjct: 453 LSKMKQLKLQPNVGTYELLFSLFGNVNAPYEEGNMLSQVDVARRIKAIEMDMMNNGIQHS 512

Query: 208 YLSMANLLRALGAEGMVRELTQYLRMAENQIFLTNPFHGTTVYNSALHSLVEAKESHMAI 29
           +LSM NLL+ALGAEGM+REL QYL +AENQ F TN + GT +YN+ LHSLVEAKESH+AI
Sbjct: 513 HLSMKNLLKALGAEGMIRELMQYLHVAENQFFRTNTYLGTPIYNTVLHSLVEAKESHIAI 572

Query: 28  EIFKDMKSR 2
           EIFK+M SR
Sbjct: 573 EIFKNMISR 581


>ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like [Vitis vinifera]
          Length = 728

 Score =  239 bits (610), Expect = 2e-61
 Identities = 124/189 (65%), Positives = 150/189 (79%)
 Frame = -3

Query: 568 NLKPTNSILGTLSIACSQXXXXXXXXXLVDQIVKSSWRLPFNALLAAYDAMDQPERAVRL 389
           NLKP +S L  LSI  S+         L+DQI + S+  PFNA LAA D +DQPERAV +
Sbjct: 317 NLKPYDSTLAALSIGSSKALQLDLAESLLDQISRISYVHPFNAFLAACDTLDQPERAVPI 376

Query: 388 LAKMKQLKLKSDSRTYELLFSLFGNVNAPYEKGDTMSQVDVAKRINAIEMDMVKNGVQHN 209
           L+KMKQLKL+ +  TYELLFSLFGNVNAPYE+G+ +SQVDVA+RI AIEMDM+ NG+QH+
Sbjct: 377 LSKMKQLKLQPNVGTYELLFSLFGNVNAPYEEGNMLSQVDVARRIKAIEMDMMNNGIQHS 436

Query: 208 YLSMANLLRALGAEGMVRELTQYLRMAENQIFLTNPFHGTTVYNSALHSLVEAKESHMAI 29
           +LSM NLL+ALGAEGM+REL QYL +AENQ F TN + GT +YN+ LHSLVEAKESH+AI
Sbjct: 437 HLSMKNLLKALGAEGMIRELMQYLHVAENQFFRTNTYLGTPIYNTVLHSLVEAKESHIAI 496

Query: 28  EIFKDMKSR 2
           EIFK+M SR
Sbjct: 497 EIFKNMISR 505


>ref|XP_002889073.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334914|gb|EFH65332.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 800

 Score =  222 bits (565), Expect = 4e-56
 Identities = 116/188 (61%), Positives = 142/188 (75%)
 Frame = -3

Query: 568 NLKPTNSILGTLSIACSQXXXXXXXXXLVDQIVKSSWRLPFNALLAAYDAMDQPERAVRL 389
           NLKP +S L T+S  CS+         L+DQI + S+  PFN LLAAYD++DQPERAVR+
Sbjct: 393 NLKPYDSTLATVSAYCSKAFQVDLAEHLLDQISECSYAYPFNNLLAAYDSLDQPERAVRV 452

Query: 388 LAKMKQLKLKSDSRTYELLFSLFGNVNAPYEKGDTMSQVDVAKRINAIEMDMVKNGVQHN 209
           LA+MKQLKL+ D RTYELLFSLFGNVNAPYE+G+ +SQVD  KRINAIEMDMV+NG QH+
Sbjct: 453 LARMKQLKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAIEMDMVRNGFQHS 512

Query: 208 YLSMANLLRALGAEGMVRELTQYLRMAENQIFLTNPFHGTTVYNSALHSLVEAKESHMAI 29
            +S  N+LRALGAEGMV E+ ++L+ AEN    +N + GT  YN  LHSL+EA E+ M I
Sbjct: 513 PISRRNVLRALGAEGMVNEMIRHLQKAENLNVHSNMYLGTPTYNIVLHSLLEANETDMVI 572

Query: 28  EIFKDMKS 5
            IFK MKS
Sbjct: 573 NIFKRMKS 580


>ref|NP_177755.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806405|sp|Q9SGQ6.2|PP126_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g76280 gi|332197697|gb|AEE35818.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 773

 Score =  218 bits (556), Expect = 4e-55
 Identities = 113/188 (60%), Positives = 142/188 (75%)
 Frame = -3

Query: 568 NLKPTNSILGTLSIACSQXXXXXXXXXLVDQIVKSSWRLPFNALLAAYDAMDQPERAVRL 389
           NLKP +S L T++  CS+         L+DQI + S+  PFN LLAAYD++DQPERAVR+
Sbjct: 366 NLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNLLAAYDSLDQPERAVRV 425

Query: 388 LAKMKQLKLKSDSRTYELLFSLFGNVNAPYEKGDTMSQVDVAKRINAIEMDMVKNGVQHN 209
           LA+MK+LKL+ D RTYELLFSLFGNVNAPYE+G+ +SQVD  KRINAIEMDM++NG QH+
Sbjct: 426 LARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAIEMDMMRNGFQHS 485

Query: 208 YLSMANLLRALGAEGMVRELTQYLRMAENQIFLTNPFHGTTVYNSALHSLVEAKESHMAI 29
            +S  N+LRALGAEGMV E+ ++L+ AEN    +N + GT  YN  LHSL+EA E+ M I
Sbjct: 486 PISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVLHSLLEANETDMVI 545

Query: 28  EIFKDMKS 5
            IFK MKS
Sbjct: 546 NIFKRMKS 553


>ref|NP_001185409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332197699|gb|AEE35820.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 801

 Score =  218 bits (556), Expect = 4e-55
 Identities = 113/188 (60%), Positives = 142/188 (75%)
 Frame = -3

Query: 568 NLKPTNSILGTLSIACSQXXXXXXXXXLVDQIVKSSWRLPFNALLAAYDAMDQPERAVRL 389
           NLKP +S L T++  CS+         L+DQI + S+  PFN LLAAYD++DQPERAVR+
Sbjct: 394 NLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNLLAAYDSLDQPERAVRV 453

Query: 388 LAKMKQLKLKSDSRTYELLFSLFGNVNAPYEKGDTMSQVDVAKRINAIEMDMVKNGVQHN 209
           LA+MK+LKL+ D RTYELLFSLFGNVNAPYE+G+ +SQVD  KRINAIEMDM++NG QH+
Sbjct: 454 LARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAIEMDMMRNGFQHS 513

Query: 208 YLSMANLLRALGAEGMVRELTQYLRMAENQIFLTNPFHGTTVYNSALHSLVEAKESHMAI 29
            +S  N+LRALGAEGMV E+ ++L+ AEN    +N + GT  YN  LHSL+EA E+ M I
Sbjct: 514 PISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVLHSLLEANETDMVI 573

Query: 28  EIFKDMKS 5
            IFK MKS
Sbjct: 574 NIFKRMKS 581