BLASTX nr result

ID: Cimicifuga21_contig00022455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022455
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFY99067.1| translation initiation factor, partial [Clermonti...    70   1e-10
gb|AFY99068.1| translation initiation factor, partial [Clermonti...    70   2e-10
ref|XP_002966250.1| hypothetical protein SELMODRAFT_85554 [Selag...    70   2e-10
ref|XP_002884997.1| predicted protein [Arabidopsis lyrata subsp....    70   2e-10
gb|AFY99065.1| translation initiation factor, partial [Lobelia e...    69   3e-10

>gb|AFY99067.1| translation initiation factor, partial [Clermontia arborescens
           subsp. waihiae]
          Length = 117

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/76 (55%), Positives = 46/76 (60%)
 Frame = +3

Query: 132 CGQFDSIQTAPHLTGTTEYFCLNILHQLDFRRVKCLTLVLARTRKCAQPVEKAMRALVRN 311
           C   D IQ A   TG T  FC  IL QLD++ V C  LVLA TR+ AQ +EK MRAL   
Sbjct: 16  CKGLDVIQQAQSGTGKTALFCSGILQQLDYKEVHCQALVLAPTRELAQQIEKVMRALGDY 75

Query: 312 LNVKVHARVRGSGTSV 359
           L VKVHA V   GTSV
Sbjct: 76  LGVKVHACV--GGTSV 89


>gb|AFY99068.1| translation initiation factor, partial [Clermontia fauriei]
          Length = 106

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/76 (55%), Positives = 46/76 (60%)
 Frame = +3

Query: 132 CGQFDSIQTAPHLTGTTEYFCLNILHQLDFRRVKCLTLVLARTRKCAQPVEKAMRALVRN 311
           C   D IQ A   TG T  FC  IL QLD++ V C  LVLA TR+ AQ +EK MRAL   
Sbjct: 16  CKGLDVIQQAQSGTGKTATFCSGILQQLDYKEVHCQALVLAPTRELAQQIEKVMRALGDY 75

Query: 312 LNVKVHARVRGSGTSV 359
           L VKVHA V   GTSV
Sbjct: 76  LGVKVHACV--GGTSV 89


>ref|XP_002966250.1| hypothetical protein SELMODRAFT_85554 [Selaginella moellendorffii]
           gi|302801131|ref|XP_002982322.1| hypothetical protein
           SELMODRAFT_116103 [Selaginella moellendorffii]
           gi|300149914|gb|EFJ16567.1| hypothetical protein
           SELMODRAFT_116103 [Selaginella moellendorffii]
           gi|300165670|gb|EFJ32277.1| hypothetical protein
           SELMODRAFT_85554 [Selaginella moellendorffii]
          Length = 411

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/72 (54%), Positives = 44/72 (61%)
 Frame = +3

Query: 132 CGQFDSIQTAPHLTGTTEYFCLNILHQLDFRRVKCLTLVLARTRKCAQPVEKAMRALVRN 311
           C   D IQ A   TG T  FC  IL QLD+  V+C  LVLA TR+ AQ +EK MRAL   
Sbjct: 73  CKGIDVIQQAQSGTGKTATFCSGILQQLDYNNVECQALVLAPTRELAQQIEKVMRALGDY 132

Query: 312 LNVKVHARVRGS 347
           L VKVHA V G+
Sbjct: 133 LQVKVHACVGGT 144


>ref|XP_002884997.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330837|gb|EFH61256.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 412

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/76 (55%), Positives = 46/76 (60%)
 Frame = +3

Query: 132 CGQFDSIQTAPHLTGTTEYFCLNILHQLDFRRVKCLTLVLARTRKCAQPVEKAMRALVRN 311
           C   D IQ A   TG T  FC  +L QLDF  V+C  LVLA TR+ AQ +EK MRAL   
Sbjct: 74  CKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLVQCQALVLAPTRELAQQIEKVMRALGDY 133

Query: 312 LNVKVHARVRGSGTSV 359
           L VKVHA V   GTSV
Sbjct: 134 LGVKVHACV--GGTSV 147


>gb|AFY99065.1| translation initiation factor, partial [Lobelia erinus]
          Length = 116

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/76 (55%), Positives = 46/76 (60%)
 Frame = +3

Query: 132 CGQFDSIQTAPHLTGTTEYFCLNILHQLDFRRVKCLTLVLARTRKCAQPVEKAMRALVRN 311
           C   D IQ A   TG T  FC  IL QLD+  V+C  LVLA TR+ AQ +EK MRAL   
Sbjct: 15  CKGLDVIQQAQSGTGKTATFCSGILQQLDYGNVQCQALVLAPTRELAQQIEKVMRALGDY 74

Query: 312 LNVKVHARVRGSGTSV 359
           L VKVHA V   GTSV
Sbjct: 75  LGVKVHACV--GGTSV 88


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