BLASTX nr result

ID: Cimicifuga21_contig00022430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022430
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39466.3| unnamed protein product [Vitis vinifera]               64   1e-08
emb|CAN68677.1| hypothetical protein VITISV_041940 [Vitis vinifera]    64   1e-08
ref|XP_003621771.1| F-box family protein [Medicago truncatula] g...    64   1e-08
ref|XP_003623994.1| F-box protein [Medicago truncatula] gi|35549...    64   2e-08
gb|EAY90150.1| hypothetical protein OsI_11715 [Oryza sativa Indi...    63   3e-08

>emb|CBI39466.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = -3

Query: 300 KLPQDLTSDILLRLPIKSAMRCRCVCKAWRTLLNNPHFINMHL 172
           +LP  +  +ILLRLP+KS +R RCVCKAWRTL+++PHF+  HL
Sbjct: 3   ELPLHIIENILLRLPVKSLIRSRCVCKAWRTLISHPHFVKSHL 45


>emb|CAN68677.1| hypothetical protein VITISV_041940 [Vitis vinifera]
          Length = 485

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/48 (56%), Positives = 37/48 (77%)
 Frame = -3

Query: 276 DILLRLPIKSAMRCRCVCKAWRTLLNNPHFINMHLTRSSLAKNLSLLL 133
           D+LLRLP+KS +R +CVC++W+TL N+P FINMHL R+    N  +LL
Sbjct: 90  DVLLRLPVKSIIRFKCVCQSWQTLFNDPDFINMHLRRAITHNNCCMLL 137


>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
           gi|355496786|gb|AES77989.1| F-box family protein
           [Medicago truncatula]
          Length = 524

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 25/56 (44%), Positives = 42/56 (75%)
 Frame = -3

Query: 297 LPQDLTSDILLRLPIKSAMRCRCVCKAWRTLLNNPHFINMHLTRSSLAKNLSLLLF 130
           LP ++ ++IL RLP++S M+ +CVCK+W T++++P FI MHL RS+   N S++ +
Sbjct: 94  LPDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKMHLNRSARNPNFSVVSY 149


>ref|XP_003623994.1| F-box protein [Medicago truncatula] gi|355499009|gb|AES80212.1|
           F-box protein [Medicago truncatula]
          Length = 249

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/55 (47%), Positives = 41/55 (74%)
 Frame = -3

Query: 297 LPQDLTSDILLRLPIKSAMRCRCVCKAWRTLLNNPHFINMHLTRSSLAKNLSLLL 133
           LP DL +++L  LP+KS +R +CVCK+W+TL++NP+F+ +HL +SS    L  L+
Sbjct: 6   LPDDLITELLSFLPVKSPVRFKCVCKSWKTLISNPNFVKLHLNQSSTRNPLFTLV 60


>gb|EAY90150.1| hypothetical protein OsI_11715 [Oryza sativa Indica Group]
          Length = 408

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
 Frame = -3

Query: 297 LPQDLTSDILLRLPIKSAMRCRCVCKAWRTLLNNPHFINMHLTRS---------SLAKNL 145
           LP DL  +ILLRLP +S +RCR VCKAWR+  ++P+F+  H TRS         + A +L
Sbjct: 23  LPDDLLDEILLRLPARSILRCRAVCKAWRSRTSHPYFLRAHATRSRKIAAAVVYTAAFSL 82

Query: 144 SLLLFTIDITS-GDKRNHSTSDKRNYSTPVIVVS 46
           +    T+ I    D    +  D    + P  VVS
Sbjct: 83  AQFRTTVSIRPLSDSDGDNDGDSSGAADPPCVVS 116


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