BLASTX nr result

ID: Cimicifuga21_contig00022428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022428
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|2...   215   3e-54
ref|XP_002526507.1| malic enzyme, putative [Ricinus communis] gi...   211   4e-53
ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa...   211   5e-53
ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|2...   210   1e-52
ref|XP_003626824.1| Pentatricopeptide repeat-containing protein ...   206   2e-51

>ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|222844209|gb|EEE81756.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  215 bits (548), Expect = 3e-54
 Identities = 106/139 (76%), Positives = 118/139 (84%)
 Frame = -1

Query: 427 IFASGSPFKDVNLGNGAIGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAASECLAAY 248
           IFASGSPFKDV+LGNG IGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAA+ECLAAY
Sbjct: 489 IFASGSPFKDVDLGNGHIGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAAAECLAAY 548

Query: 247 MKDDEVLKGIIFPSISSIRDITXXXXXXXXXXXXXEDLAEGYRDMEARELKKLTKEEIVT 68
           M ++EVLKGII+PS S IRDIT             EDLAEGYR+M+AREL+KL++EEI  
Sbjct: 549 MTEEEVLKGIIYPSTSRIRDITKEVAAAVVKEAIEEDLAEGYREMDARELRKLSQEEIEE 608

Query: 67  YVKNNMWDPSYPTLVYRKE 11
           YVKNNMW P YPTLVY+K+
Sbjct: 609 YVKNNMWSPDYPTLVYKKD 627


>ref|XP_002526507.1| malic enzyme, putative [Ricinus communis]
           gi|223534182|gb|EEF35898.1| malic enzyme, putative
           [Ricinus communis]
          Length = 626

 Score =  211 bits (538), Expect = 4e-53
 Identities = 103/138 (74%), Positives = 117/138 (84%)
 Frame = -1

Query: 427 IFASGSPFKDVNLGNGAIGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAASECLAAY 248
           IFASGSPFKDV+LGNG +GHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAA+ECLAAY
Sbjct: 488 IFASGSPFKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAAAECLAAY 547

Query: 247 MKDDEVLKGIIFPSISSIRDITXXXXXXXXXXXXXEDLAEGYRDMEARELKKLTKEEIVT 68
           M ++EVL+GIIFPS S IRDIT             EDLAEGYR+M+ARE++KL +EEI+ 
Sbjct: 548 MTEEEVLQGIIFPSTSRIRDITKQVAAAVVKEAIEEDLAEGYREMDAREVRKLNEEEILE 607

Query: 67  YVKNNMWDPSYPTLVYRK 14
           YVKN+MW P YPTLVY+K
Sbjct: 608 YVKNSMWSPDYPTLVYKK 625


>ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
           [Vitis vinifera] gi|297734678|emb|CBI16729.3| unnamed
           protein product [Vitis vinifera]
          Length = 625

 Score =  211 bits (537), Expect = 5e-53
 Identities = 103/139 (74%), Positives = 119/139 (85%)
 Frame = -1

Query: 427 IFASGSPFKDVNLGNGAIGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAASECLAAY 248
           IFASGSPFKDV+LGNG IGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAA+ECLAAY
Sbjct: 487 IFASGSPFKDVDLGNGHIGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAAAECLAAY 546

Query: 247 MKDDEVLKGIIFPSISSIRDITXXXXXXXXXXXXXEDLAEGYRDMEARELKKLTKEEIVT 68
           M ++EVLKG+I+PSISSIRDIT             EDLAEGYR ++AREL KL +EE+ T
Sbjct: 547 MTEEEVLKGMIYPSISSIRDITKEVAAAVVREAIEEDLAEGYRGIDARELCKLNQEELAT 606

Query: 67  YVKNNMWDPSYPTLVYRKE 11
           +V++NMWDP YPTLVY+++
Sbjct: 607 FVEDNMWDPDYPTLVYKQD 625


>ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|222835196|gb|EEE73631.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  210 bits (534), Expect = 1e-52
 Identities = 102/139 (73%), Positives = 117/139 (84%)
 Frame = -1

Query: 427 IFASGSPFKDVNLGNGAIGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAASECLAAY 248
           +FASGSPF+DV+LGNG IGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAA+ECLA Y
Sbjct: 489 LFASGSPFQDVDLGNGHIGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAAAECLAEY 548

Query: 247 MKDDEVLKGIIFPSISSIRDITXXXXXXXXXXXXXEDLAEGYRDMEARELKKLTKEEIVT 68
           M ++EVL GII+PS S IRDIT             EDLAEGYR+M+AREL+KL++EEIV 
Sbjct: 549 MAEEEVLNGIIYPSTSRIRDITKEVAAAVVKEAIKEDLAEGYREMDARELQKLSQEEIVE 608

Query: 67  YVKNNMWDPSYPTLVYRKE 11
           YVKNNMW P YPTLVY+++
Sbjct: 609 YVKNNMWSPDYPTLVYKRD 627


>ref|XP_003626824.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|357513073|ref|XP_003626825.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355520846|gb|AET01300.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355520847|gb|AET01301.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 628

 Score =  206 bits (523), Expect = 2e-51
 Identities = 102/139 (73%), Positives = 116/139 (83%)
 Frame = -1

Query: 427 IFASGSPFKDVNLGNGAIGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAASECLAAY 248
           IFASGSPF +V+LGNG IGHCNQGNNMYLFPGIGLGTLLSGSRI+SDGMLQAA+E LAAY
Sbjct: 490 IFASGSPFSNVDLGNGNIGHCNQGNNMYLFPGIGLGTLLSGSRIVSDGMLQAAAERLAAY 549

Query: 247 MKDDEVLKGIIFPSISSIRDITXXXXXXXXXXXXXEDLAEGYRDMEARELKKLTKEEIVT 68
           M ++EVLKGIIFPSIS IRDIT             EDLAEGY +M+AREL+KL+++EI  
Sbjct: 550 MSEEEVLKGIIFPSISRIRDITKEIAAAVIEEAVEEDLAEGYHEMDARELRKLSRDEIKE 609

Query: 67  YVKNNMWDPSYPTLVYRKE 11
           YV NNMW+P YPTLVYRK+
Sbjct: 610 YVINNMWNPEYPTLVYRKD 628


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