BLASTX nr result

ID: Cimicifuga21_contig00022420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022420
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_195233.2| SBP (S-ribonuclease binding protein) family pro...    59   5e-07
ref|XP_002277843.1| PREDICTED: uncharacterized protein LOC100262...    56   3e-06

>ref|NP_195233.2| SBP (S-ribonuclease binding protein) family protein [Arabidopsis
           thaliana] gi|51536446|gb|AAU05461.1| At4g35070
           [Arabidopsis thaliana] gi|51972074|gb|AAU15141.1|
           At4g35070 [Arabidopsis thaliana]
           gi|110738622|dbj|BAF01236.1| hypothetical protein
           [Arabidopsis thaliana] gi|332661057|gb|AEE86457.1| SBP
           (S-ribonuclease binding protein) family protein
           [Arabidopsis thaliana]
          Length = 265

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/88 (42%), Positives = 50/88 (56%)
 Frame = -1

Query: 265 FSFCDSMETTNIGNGNGGFLEFSPHLPQQQQYHDIFQNQYLGQAVDPSMGVSPQFSLALQ 86
           FS  ++     IGN    +L  +  L +    H +F +Q+  Q   PS     Q  LA Q
Sbjct: 24  FSLINNNGVIGIGNDQS-YLVNNLQLQKDFNQHALFHHQHHQQQQSPS-----QSFLAAQ 77

Query: 85  VEKQRQEIDRFIALQNERLRKALQEERK 2
           +EKQ+QEID+FI +QNERLR  LQE+RK
Sbjct: 78  MEKQKQEIDQFIKIQNERLRYVLQEQRK 105


>ref|XP_002277843.1| PREDICTED: uncharacterized protein LOC100262284 [Vitis vinifera]
          Length = 286

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 43/118 (36%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
 Frame = -1

Query: 298 MAVQA--LDHFVGFSFCDSMETTNIG--NGNGGFLEFSPHLPQ--------------QQQ 173
           MA+QA      +GFS   S E  + G    NG       H  Q              Q+ 
Sbjct: 1   MAIQAQLYSENLGFSLGGSQEWVDNGCVGFNGSCFNLQQHQQQYMQQLQSQQEQIQSQRN 60

Query: 172 YHDIF-QNQYLGQAVDPSMGVSPQFSLALQVEKQRQEIDRFIALQNERLRKALQEERK 2
           Y + F  N  +G  +  S       SLA Q + QRQEID+FI LQ+ERLR  LQE+RK
Sbjct: 61  YQNFFLDNSLMGSTLKNSPNYGSSHSLASQFDNQRQEIDQFITLQSERLRLVLQEQRK 118


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