BLASTX nr result

ID: Cimicifuga21_contig00022405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022405
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187920.1| uncharacterized protein [Arabidopsis thaliana] ...    66   4e-09
ref|XP_003633331.1| PREDICTED: uncharacterized protein LOC100854...    65   7e-09
emb|CAN79287.1| hypothetical protein VITISV_044034 [Vitis vinifera]    65   9e-09
dbj|BAD43456.1| hypothetical protein [Arabidopsis thaliana]            64   2e-08
ref|XP_002882806.1| hypothetical protein ARALYDRAFT_478689 [Arab...    62   5e-08

>ref|NP_187920.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10172600|dbj|BAB01404.1| unnamed protein product
           [Arabidopsis thaliana] gi|332641779|gb|AEE75300.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 201

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 41/164 (25%)
 Frame = +2

Query: 134 FQFHLSHYSVDRNYMFLICNGILVFL----GLVGSPS----FKSNTDVQGD----DSNTT 277
           F   L  ++VD+NYMFL+CNG++V +    GLV S        SNTD   D    +S TT
Sbjct: 36  FMIQLVTHAVDKNYMFLLCNGLVVVVAKCSGLVASSKPIEKIWSNTDKTFDYGDFESYTT 95

Query: 278 LNAYPMK--------------YVVEKESCHVQDVDNELVDEFITT--------------N 373
           +     K                VE+++ H +  DNE  D+   T               
Sbjct: 96  ILELEYKSDHGIGTESFLAEEVTVEEDTKHQETEDNEEEDDDDNTLADNDGEEECGLRGG 155

Query: 374 GVRXXXXXXMNGLVSTEE-LNKKFDDFIRKTKEEIRLQAHQQLI 502
            +       +  + STEE +NKKFD+FIRK KEE+R++A + LI
Sbjct: 156 SINEEEEGNVGVMTSTEEEMNKKFDEFIRKMKEELRIEAKRHLI 199


>ref|XP_003633331.1| PREDICTED: uncharacterized protein LOC100854493 [Vitis vinifera]
          Length = 212

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 34/159 (21%)
 Frame = +2

Query: 119 YFSTFFQFHLSHYSVDRNYMFLICNGILVFL----GLV-GSPSFKSNTDVQG----DDSN 271
           YFSTF    L  Y +DR+Y+FL+CNGILVF+    GL+  SPS+ ++ +  G    D   
Sbjct: 51  YFSTF-SMKLHDYGIDRHYIFLLCNGILVFIVKNSGLINNSPSWGTDLNDVGIKNRDSQG 109

Query: 272 TTLNAYPMKYVVEKESCHV----------------QDVDNELVDEFITTNGVRXXXXXXM 403
                Y +K +  +E   +                ++VD E+ +E     G         
Sbjct: 110 PAPEFYKIKPLAAREKAVMEVEEEEGRENGLVITEEEVDVEVEEEEERQMGQENWFLVIK 169

Query: 404 ---------NGLVSTEELNKKFDDFIRKTKEEIRLQAHQ 493
                     GL+S EELNKK DDFI+K +E I+ +A Q
Sbjct: 170 EEEEEEEEETGLLSAEELNKKCDDFIKKMREGIKFEAQQ 208


>emb|CAN79287.1| hypothetical protein VITISV_044034 [Vitis vinifera]
          Length = 214

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 36/161 (22%)
 Frame = +2

Query: 119 YFSTFFQFHLSHYSVDRNYMFLICNGILVFL----GLV-GSPSFKSNTDVQG----DDSN 271
           YFSTF    L  Y +DR+Y+FL+CNGILVF+    GL+  SPS+ ++ +  G    D   
Sbjct: 51  YFSTF-SMKLHDYGIDRHYIFLLCNGILVFIVKNSGLINNSPSWGTDHNDVGIKNRDSQG 109

Query: 272 TTLNAYPMKYVVEKESCHV----------------QDVDNELVDE-----------FITT 370
                Y +K +  +E   +                ++VD E+ +E            +  
Sbjct: 110 PAPEFYKIKPLAAREKAVMEVEEEEGRENGLVITEEEVDVEVEEEEERQMGQENWFLVIK 169

Query: 371 NGVRXXXXXXMNGLVSTEELNKKFDDFIRKTKEEIRLQAHQ 493
                       GL+S EELNKK DDFI+K +E I+ +A Q
Sbjct: 170 EEEEEEEAEEETGLLSAEELNKKCDDFIKKMREGIKFEAQQ 210


>dbj|BAD43456.1| hypothetical protein [Arabidopsis thaliana]
          Length = 201

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 41/164 (25%)
 Frame = +2

Query: 134 FQFHLSHYSVDRNYMFLICNGILVFL----GLVGSPS----FKSNTDVQGD----DSNTT 277
           F   L  ++VD+NYMFL+CNG++V +    GLV S        SNTD   D    +S TT
Sbjct: 36  FMIQLVTHAVDKNYMFLLCNGLVVVVAKCSGLVASSKPIEKIWSNTDKTFDYGDFESYTT 95

Query: 278 LNAYPMK--------------YVVEKESCHVQDVDNELVDEFITT--------------N 373
           +     K                VE+++ H +  DNE  D+   T               
Sbjct: 96  ILELEYKSDHGIGTESFLAEEVTVEEDTKHQETEDNEEEDDDDNTLADNDGEEECGLRGG 155

Query: 374 GVRXXXXXXMNGLVSTEE-LNKKFDDFIRKTKEEIRLQAHQQLI 502
            +       +  + STEE +NKK D+FIRK KEE+R++A + LI
Sbjct: 156 SINEEEEGNVGVMTSTEEEMNKKLDEFIRKMKEELRIEAKRHLI 199


>ref|XP_002882806.1| hypothetical protein ARALYDRAFT_478689 [Arabidopsis lyrata subsp.
           lyrata] gi|297328646|gb|EFH59065.1| hypothetical protein
           ARALYDRAFT_478689 [Arabidopsis lyrata subsp. lyrata]
          Length = 200

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 56/165 (33%), Positives = 77/165 (46%), Gaps = 43/165 (26%)
 Frame = +2

Query: 134 FQFHLSHYSVDRNYMFLICNGILVFL----GLVGSPS----FKSNTDVQGDDSN------ 271
           F   L  ++VD+NYMFL+CNG+LV +    GLV S      F SNTD   D  +      
Sbjct: 36  FMIQLVTHAVDKNYMFLLCNGLLVVVAKCSGLVASSKPIEKFWSNTDKTFDYGDFESYNA 95

Query: 272 ------TTLNAYPMKY--------VVEKESCHVQ-------DVDNELVD-----EFITTN 373
                  ++N    +Y         VE+++ H +       D DN L D     E    +
Sbjct: 96  ILEVKYNSVNGIGTEYSFLLAEEVTVEEDTKHQETEENEEDDDDNTLADNEGEEECDLRD 155

Query: 374 GVRXXXXXXMNGLVST---EELNKKFDDFIRKTKEEIRLQAHQQL 499
           G         N  V T   EE+NKKFD+FIRK KEE+R++A + L
Sbjct: 156 GSINEEEEEENVEVMTSTEEEMNKKFDEFIRKMKEELRIEAKRHL 200


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