BLASTX nr result

ID: Cimicifuga21_contig00022404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022404
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634392.1| PREDICTED: uncharacterized protein LOC100249...    79   5e-13
ref|XP_002510560.1| hypothetical protein RCOM_1598450 [Ricinus c...    63   3e-08
ref|XP_002301962.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_003634392.1| PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera]
          Length = 221

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 49/148 (33%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
 Frame = +1

Query: 1   PDGTISPHQSIAHGGILIRPPPPLFSSIPS-----------RQPPLLPLPISKPY----- 132
           P   +SP ++I HGG+L+ PPP L SS  S           +QPPLLPLP+ K Y     
Sbjct: 34  PSENLSPSRNI-HGGLLLAPPPSLSSSFHSSALLFDHHPHHQQPPLLPLPVPKTYASLPP 92

Query: 133 -SPPRNTRGGRALSSSPPTNKKPNKHKSSTRDSSKSIVNMETLIMGSIHRLGPEPSDLPK 309
            SPP N +      S  P   KP+       DS  + ++  +++  S +RLGP+P DLPK
Sbjct: 93  RSPPLNKKTKIRDQSLTPKKSKPSSRSPKKEDSKSTAISDGSVMAASTNRLGPDPKDLPK 152

Query: 310 GVYKVLKXXXXXXXXXXXXXGGSIFCLA 393
                +               GS+F L+
Sbjct: 153 DAVSRILTSGNIVIEDLDKFSGSVFTLS 180


>ref|XP_002510560.1| hypothetical protein RCOM_1598450 [Ricinus communis]
           gi|223551261|gb|EEF52747.1| hypothetical protein
           RCOM_1598450 [Ricinus communis]
          Length = 245

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 51/128 (39%), Positives = 63/128 (49%), Gaps = 24/128 (18%)
 Frame = +1

Query: 16  SPHQSIAHGGILIRPPPPL---FSSIPS-----------RQPPLLPLPISKPYSPPRNTR 153
           S + +I HGG L  PPPP    FS  P+           +QPPLLPLP+S   S    TR
Sbjct: 46  SNNNNIIHGGGLFFPPPPRALSFSYPPAVGLYPIQQRQGQQPPLLPLPVSTIRSLNSRTR 105

Query: 154 GGRALSSSPPTNKKPNKHK--SSTRDSSKSIV--------NMETLIMGSIHRLGPEPSDL 303
               LS  P T +K N+ +  S T   SK  +        N + LI+ S    GPEP+DL
Sbjct: 106 D---LSCPPTTTRKTNRTRDHSLTPKKSKQPIPRNEEPKQNSKPLIIASTVPSGPEPNDL 162

Query: 304 PKGVYKVL 327
           PK V KVL
Sbjct: 163 PKDVSKVL 170


>ref|XP_002301962.1| predicted protein [Populus trichocarpa] gi|222843688|gb|EEE81235.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 46/125 (36%), Positives = 57/125 (45%), Gaps = 28/125 (22%)
 Frame = +1

Query: 37  HGGILIRPPPPL--FSSIPSR----------------QPPLLPLPISKPY--SPPRNTRG 156
           HGG+   PP  L  FS  PS                 QPPLLPLP S+P   S P  +RG
Sbjct: 58  HGGLFFAPPRNLLSFSYPPSSLSVLNPHQQYYYQKQAQPPLLPLPTSQPRHNSLPSLSRG 117

Query: 157 GRALSSSPPTNKKPNK--------HKSSTRDSSKSIVNMETLIMGSIHRLGPEPSDLPKG 312
               S  P   +K N+         KS   ++ K     E+LI+ S   LGP+P DLP+ 
Sbjct: 118 ---FSCPPTATRKTNRPRDQSFTPKKSKQPNTKKEKPKKESLIIESTVPLGPDPKDLPRD 174

Query: 313 VYKVL 327
           V KVL
Sbjct: 175 VSKVL 179


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