BLASTX nr result

ID: Cimicifuga21_contig00022390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022390
         (1551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273705.1| PREDICTED: F-box protein At1g70590 [Vitis vi...   437   e-120
ref|XP_002527920.1| conserved hypothetical protein [Ricinus comm...   434   e-119
ref|XP_002315673.1| predicted protein [Populus trichocarpa] gi|2...   428   e-117
ref|XP_002312677.1| predicted protein [Populus trichocarpa] gi|2...   424   e-116
ref|XP_004142966.1| PREDICTED: F-box protein At1g70590-like isof...   409   e-112

>ref|XP_002273705.1| PREDICTED: F-box protein At1g70590 [Vitis vinifera]
          Length = 335

 Score =  437 bits (1124), Expect = e-120
 Identities = 208/283 (73%), Positives = 241/283 (85%)
 Frame = -3

Query: 1216 SNFALLPFDVLTKIAASFNYPDLKSTSLVCKSWRDALLPLREAMLFLMQGKKFKHGHGGV 1037
            ++F+ LP D+L KIAA+F  PDL++ SLVC+SWRD+L PLREAML L  GK+FKHGHGGV
Sbjct: 51   TDFSKLPDDILQKIAATFTLPDLQTASLVCRSWRDSLRPLREAMLLLKWGKRFKHGHGGV 110

Query: 1036 RPNPSKALDSFLKGVYLGSTLAMVDAGLLYWELGKKDEGIALYMRAAALGDPAGQCNLGI 857
            RPN  KALDSFLKG   GSTLAMVDAGL+YWE+GKK+E IALY +AA LGDP  QCNLGI
Sbjct: 111  RPNIQKALDSFLKGAARGSTLAMVDAGLIYWEMGKKEESIALYRKAAELGDPTAQCNLGI 170

Query: 856  SYLRVEPPNLQEAVKWLYKASIAGHARAQYQLALCLHQGRGVRRNLSEAAKWYLRAAEGG 677
            SYL  EPP  +EA KWLY +S AG+ RAQYQLALCLH+GRG+ RNL EAA+WYL+AAEGG
Sbjct: 171  SYLHSEPPKREEAAKWLYLSSNAGYVRAQYQLALCLHRGRGMDRNLPEAARWYLKAAEGG 230

Query: 676  YVRAMYNTSLCYSFGEGLAHSHHHAKKWMKRAADRGHSKAQYEHGLGLFSKGEMVNAVVY 497
            YVRAMYN SLCYS+GEGL HSH  A++WMKRAADRGHSKAQ+EHGLGLFS+GEM+ AVVY
Sbjct: 231  YVRAMYNVSLCYSYGEGLVHSHRQARRWMKRAADRGHSKAQFEHGLGLFSEGEMMKAVVY 290

Query: 496  LELATRAGETVATSIRNLILEQLSETSRDYAMRVVDNWRALPS 368
            LELATRAGET A  ++N+IL+QLS TSRD AM + DNWRALP+
Sbjct: 291  LELATRAGETAAAHVKNVILQQLSVTSRDRAMLLADNWRALPT 333


>ref|XP_002527920.1| conserved hypothetical protein [Ricinus communis]
            gi|223532695|gb|EEF34477.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 329

 Score =  434 bits (1117), Expect = e-119
 Identities = 209/282 (74%), Positives = 241/282 (85%)
 Frame = -3

Query: 1213 NFALLPFDVLTKIAASFNYPDLKSTSLVCKSWRDALLPLREAMLFLMQGKKFKHGHGGVR 1034
            +F+ LPFD+L KIAASF  P+L++ SLVC+SWRD L PLREAM+FL  GK+FKHG GGVR
Sbjct: 46   DFSTLPFDILIKIAASFTLPNLQTASLVCRSWRDGLRPLREAMVFLKWGKRFKHGRGGVR 105

Query: 1033 PNPSKALDSFLKGVYLGSTLAMVDAGLLYWELGKKDEGIALYMRAAALGDPAGQCNLGIS 854
            PN  KALDSFLKGV LGS LAMVDAGL+YWE+G KD+ IALY++AA LGDPAGQCNLGI 
Sbjct: 106  PNLQKALDSFLKGVALGSPLAMVDAGLVYWEMGFKDKAIALYLKAAELGDPAGQCNLGIY 165

Query: 853  YLRVEPPNLQEAVKWLYKASIAGHARAQYQLALCLHQGRGVRRNLSEAAKWYLRAAEGGY 674
            Y++VEPP  +EA+KWL +AS AGH RAQYQLALCLHQGRGV  NL EAAKWYL+AA GGY
Sbjct: 166  YVQVEPPKPKEAIKWLLQASNAGHVRAQYQLALCLHQGRGVDHNLQEAAKWYLKAAAGGY 225

Query: 673  VRAMYNTSLCYSFGEGLAHSHHHAKKWMKRAADRGHSKAQYEHGLGLFSKGEMVNAVVYL 494
            VRAMYN +LCYS GEGLA S+  A+KWMKRAADRGHSKAQ+EHGLGLFS+GEM+ AVVYL
Sbjct: 226  VRAMYNVALCYSVGEGLAQSYRQARKWMKRAADRGHSKAQFEHGLGLFSEGEMMKAVVYL 285

Query: 493  ELATRAGETVATSIRNLILEQLSETSRDYAMRVVDNWRALPS 368
            ELATRAGET A  ++N+IL+QLS TSRD  M + D+WRALPS
Sbjct: 286  ELATRAGETAAAHVKNVILQQLSTTSRDRVMLLADSWRALPS 327


>ref|XP_002315673.1| predicted protein [Populus trichocarpa] gi|222864713|gb|EEF01844.1|
            predicted protein [Populus trichocarpa]
          Length = 334

 Score =  428 bits (1100), Expect = e-117
 Identities = 206/285 (72%), Positives = 239/285 (83%)
 Frame = -3

Query: 1222 SNSNFALLPFDVLTKIAASFNYPDLKSTSLVCKSWRDALLPLREAMLFLMQGKKFKHGHG 1043
            S+ +F+ LPFD+LTKIAASF  P+L++ SLVCKSW + L PLREAMLFL  GK+FKHG G
Sbjct: 48   SDGDFSKLPFDILTKIAASFTLPNLQAASLVCKSWSEGLRPLREAMLFLKWGKRFKHGRG 107

Query: 1042 GVRPNPSKALDSFLKGVYLGSTLAMVDAGLLYWELGKKDEGIALYMRAAALGDPAGQCNL 863
            GVRPN SKAL+SFLKG   GSTLAMVDAGLLYWE+G KD+ IALY +AA LGD +GQCNL
Sbjct: 108  GVRPNLSKALESFLKGAARGSTLAMVDAGLLYWEIGDKDKAIALYEKAAKLGDRSGQCNL 167

Query: 862  GISYLRVEPPNLQEAVKWLYKASIAGHARAQYQLALCLHQGRGVRRNLSEAAKWYLRAAE 683
            G++YL+ EP   +EAVKWL++AS +GH RAQYQ ALCLHQG GV  NL EAA+WYL+AAE
Sbjct: 168  GLAYLQAEPSKRKEAVKWLFQASKSGHVRAQYQFALCLHQGSGVNCNLQEAARWYLKAAE 227

Query: 682  GGYVRAMYNTSLCYSFGEGLAHSHHHAKKWMKRAADRGHSKAQYEHGLGLFSKGEMVNAV 503
            GGYVRAMYN +LCYS GEGLA SH  A+KWMKRAADRGHSKAQ+EHGLGLFS+GE + AV
Sbjct: 228  GGYVRAMYNVALCYSVGEGLAQSHRLARKWMKRAADRGHSKAQFEHGLGLFSEGEQLKAV 287

Query: 502  VYLELATRAGETVATSIRNLILEQLSETSRDYAMRVVDNWRALPS 368
            VYLELATRAGET A  ++N+IL+QLS TSRD  M + DNWRALPS
Sbjct: 288  VYLELATRAGETAAAHVKNVILQQLSATSRDRVMNLADNWRALPS 332


>ref|XP_002312677.1| predicted protein [Populus trichocarpa] gi|222852497|gb|EEE90044.1|
            predicted protein [Populus trichocarpa]
          Length = 317

 Score =  424 bits (1090), Expect = e-116
 Identities = 203/285 (71%), Positives = 236/285 (82%)
 Frame = -3

Query: 1222 SNSNFALLPFDVLTKIAASFNYPDLKSTSLVCKSWRDALLPLREAMLFLMQGKKFKHGHG 1043
            S+ +F+ LP D+LTKIAASF  P L++ SLVCKSW + L PLREA+LFL  GK+FKHG G
Sbjct: 32   SDGDFSTLPSDILTKIAASFTLPHLQTASLVCKSWSEGLRPLREALLFLKWGKRFKHGRG 91

Query: 1042 GVRPNPSKALDSFLKGVYLGSTLAMVDAGLLYWELGKKDEGIALYMRAAALGDPAGQCNL 863
            GVRPN  KALDSFLKG   GSTLAMVDAGLLYWE+GKKD+ IALY +AA LGDP+GQCNL
Sbjct: 92   GVRPNLDKALDSFLKGAVRGSTLAMVDAGLLYWEIGKKDKAIALYKKAAVLGDPSGQCNL 151

Query: 862  GISYLRVEPPNLQEAVKWLYKASIAGHARAQYQLALCLHQGRGVRRNLSEAAKWYLRAAE 683
            G+SYL+ EP   +EAVKWL++AS +GH RAQYQLALCLHQG G  R+L EAA+WYL+AAE
Sbjct: 152  GLSYLQAEPSKRKEAVKWLFQASKSGHVRAQYQLALCLHQGCGFDRHLHEAARWYLKAAE 211

Query: 682  GGYVRAMYNTSLCYSFGEGLAHSHHHAKKWMKRAADRGHSKAQYEHGLGLFSKGEMVNAV 503
            GGYVRAMY  +LCYS GEGLA SH  A+KWMKRAADRGHS AQYEHGLGLFS+GE + AV
Sbjct: 212  GGYVRAMYRVALCYSVGEGLAQSHRQARKWMKRAADRGHSNAQYEHGLGLFSEGEKLKAV 271

Query: 502  VYLELATRAGETVATSIRNLILEQLSETSRDYAMRVVDNWRALPS 368
            VYLELAT AGET A  ++N+IL+QL  TSRD+ M + +NWRALPS
Sbjct: 272  VYLELATHAGETAAVHVKNVILQQLPATSRDHVMNLANNWRALPS 316


>ref|XP_004142966.1| PREDICTED: F-box protein At1g70590-like isoform 1 [Cucumis sativus]
            gi|449500305|ref|XP_004161061.1| PREDICTED: LOW QUALITY
            PROTEIN: F-box protein At1g70590-like [Cucumis sativus]
          Length = 368

 Score =  409 bits (1052), Expect = e-112
 Identities = 195/286 (68%), Positives = 234/286 (81%)
 Frame = -3

Query: 1225 ISNSNFALLPFDVLTKIAASFNYPDLKSTSLVCKSWRDALLPLREAMLFLMQGKKFKHGH 1046
            + + +F+ LP+DVL KIAASFN P+L++ S VCK+W DA  PLREAMLFL  GK+FKHG 
Sbjct: 81   LPSHDFSALPYDVLIKIAASFNLPNLRAASFVCKAWFDAFRPLREAMLFLRWGKRFKHGR 140

Query: 1045 GGVRPNPSKALDSFLKGVYLGSTLAMVDAGLLYWELGKKDEGIALYMRAAALGDPAGQCN 866
            GGVRPN  KAL+SFLKG   GSTLAMVDAGLLYWE+G K++ IALY +AA LGDP+ +CN
Sbjct: 141  GGVRPNSDKALNSFLKGAARGSTLAMVDAGLLYWEMGNKNDAIALYQKAADLGDPSAKCN 200

Query: 865  LGISYLRVEPPNLQEAVKWLYKASIAGHARAQYQLALCLHQGRGVRRNLSEAAKWYLRAA 686
            LGIS+L  +PPN  EAVKWL +AS+ G+ RAQYQLALCL QG GV RN+ EAA+W+++AA
Sbjct: 201  LGISFLHAKPPNPTEAVKWLRQASVVGNIRAQYQLALCLQQGHGVDRNVQEAARWFIKAA 260

Query: 685  EGGYVRAMYNTSLCYSFGEGLAHSHHHAKKWMKRAADRGHSKAQYEHGLGLFSKGEMVNA 506
            EGGYVRAMYN SLCYS GEGL H+H  AKKWMKRAADRGH KAQ+EHGL LFS+ +M+ A
Sbjct: 261  EGGYVRAMYNLSLCYSCGEGLVHNHQQAKKWMKRAADRGHCKAQFEHGLHLFSERDMMKA 320

Query: 505  VVYLELATRAGETVATSIRNLILEQLSETSRDYAMRVVDNWRALPS 368
            VVYLELATR+GE  A  ++N+IL+QLS++SRD  M V DNWR LPS
Sbjct: 321  VVYLELATRSGERAAGHVKNVILQQLSQSSRDRVMSVADNWRPLPS 366


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