BLASTX nr result

ID: Cimicifuga21_contig00022388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022388
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532706.1| Transcription initiation factor TFIID subuni...   110   1e-22
ref|XP_002299376.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_002456149.1| hypothetical protein SORBIDRAFT_03g031220 [S...   109   2e-22
ref|XP_003569565.1| PREDICTED: transcription initiation factor T...   109   3e-22
ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207...   108   4e-22

>ref|XP_002532706.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223527552|gb|EEF29673.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 205

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = -1

Query: 346 VVSGIAKMFVGELVETARVVMNERRETGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 173
           VV GIAKMFVGELVETAR+VM ER+E+GPIRPCHIREAYRRLKLEGKVPKRSVPRLFR
Sbjct: 148 VVCGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 205


>ref|XP_002299376.1| predicted protein [Populus trichocarpa] gi|222846634|gb|EEE84181.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = -1

Query: 346 VVSGIAKMFVGELVETARVVMNERRETGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 173
           VV GIAKMFVGELVETAR+VM ER+E+GPIRPCHIREAYRRLKLEGKVPKRSVPRLFR
Sbjct: 165 VVCGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 222


>ref|XP_002456149.1| hypothetical protein SORBIDRAFT_03g031220 [Sorghum bicolor]
           gi|241928124|gb|EES01269.1| hypothetical protein
           SORBIDRAFT_03g031220 [Sorghum bicolor]
          Length = 209

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/58 (87%), Positives = 57/58 (98%)
 Frame = -1

Query: 346 VVSGIAKMFVGELVETARVVMNERRETGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 173
           VVSGIAKMFVGEL+ETARVVM ER+++GPIRPCHIREAYRRLKLEGK+P+RSVPRLFR
Sbjct: 152 VVSGIAKMFVGELIETARVVMTERKDSGPIRPCHIREAYRRLKLEGKIPRRSVPRLFR 209


>ref|XP_003569565.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
           [Brachypodium distachyon]
          Length = 216

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/58 (86%), Positives = 57/58 (98%)
 Frame = -1

Query: 346 VVSGIAKMFVGELVETARVVMNERRETGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 173
           VVSGIAKMFVGE++ETAR+VM ER+++GPIRPCHIREAYRRLKLEGK+PKRSVPRLFR
Sbjct: 159 VVSGIAKMFVGEVIETARIVMTERKDSGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 216


>ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207528 [Cucumis sativus]
           gi|449494264|ref|XP_004159496.1| PREDICTED:
           uncharacterized protein LOC101229675 [Cucumis sativus]
          Length = 220

 Score =  108 bits (271), Expect = 4e-22
 Identities = 51/58 (87%), Positives = 56/58 (96%)
 Frame = -1

Query: 346 VVSGIAKMFVGELVETARVVMNERRETGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 173
           VVSGIAKMFVGELVETARVVM ER +TGPIRPCH+REAYRRLKLEGK+P++SVPRLFR
Sbjct: 163 VVSGIAKMFVGELVETARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220


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