BLASTX nr result

ID: Cimicifuga21_contig00022356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022356
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-a...   129   2e-28
emb|CBI40185.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-a...   124   1e-26
ref|XP_003536295.1| PREDICTED: probable U3 small nucleolar RNA-a...   124   1e-26
ref|XP_002315346.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26

>ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-associated protein 7
           [Vitis vinifera]
          Length = 610

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/72 (84%), Positives = 67/72 (93%)
 Frame = -1

Query: 218 GTELHCLKEHGEVLRLQFLKNNFLLASINENGRLHYQDVTMGEMVGNYRTGLGPTDVMKV 39
           GTELHCLKEHG VL+LQFLKN+FLLASIN+ G+LHYQDVTMGEMVGNYRTGLG T VM+V
Sbjct: 261 GTELHCLKEHGSVLKLQFLKNHFLLASINKFGQLHYQDVTMGEMVGNYRTGLGRTAVMQV 320

Query: 38  NPYNGVVALGHS 3
           NP+NGVV LGHS
Sbjct: 321 NPFNGVVGLGHS 332


>emb|CBI40185.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/72 (84%), Positives = 67/72 (93%)
 Frame = -1

Query: 218 GTELHCLKEHGEVLRLQFLKNNFLLASINENGRLHYQDVTMGEMVGNYRTGLGPTDVMKV 39
           GTELHCLKEHG VL+LQFLKN+FLLASIN+ G+LHYQDVTMGEMVGNYRTGLG T VM+V
Sbjct: 187 GTELHCLKEHGSVLKLQFLKNHFLLASINKFGQLHYQDVTMGEMVGNYRTGLGRTAVMQV 246

Query: 38  NPYNGVVALGHS 3
           NP+NGVV LGHS
Sbjct: 247 NPFNGVVGLGHS 258


>ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Glycine max]
          Length = 535

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/72 (80%), Positives = 67/72 (93%)
 Frame = -1

Query: 218 GTELHCLKEHGEVLRLQFLKNNFLLASINENGRLHYQDVTMGEMVGNYRTGLGPTDVMKV 39
           GTELHCLKEHG VLRLQFL+N+FLLASIN+ G+L YQDVTMG MVGN+RTGLG T+VM+V
Sbjct: 187 GTELHCLKEHGPVLRLQFLENHFLLASINKFGQLRYQDVTMGSMVGNFRTGLGRTNVMQV 246

Query: 38  NPYNGVVALGHS 3
           NP+NGVV+LGHS
Sbjct: 247 NPFNGVVSLGHS 258


>ref|XP_003536295.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Glycine max]
          Length = 535

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/72 (80%), Positives = 67/72 (93%)
 Frame = -1

Query: 218 GTELHCLKEHGEVLRLQFLKNNFLLASINENGRLHYQDVTMGEMVGNYRTGLGPTDVMKV 39
           GTELHCLKEHG VLRLQFL+N+FLLASIN+ G+L YQDVTMG MVGN+RTGLG T+VM+V
Sbjct: 187 GTELHCLKEHGPVLRLQFLENHFLLASINKFGQLRYQDVTMGSMVGNFRTGLGRTNVMQV 246

Query: 38  NPYNGVVALGHS 3
           NP+NGVV+LGHS
Sbjct: 247 NPFNGVVSLGHS 258


>ref|XP_002315346.1| predicted protein [Populus trichocarpa] gi|222864386|gb|EEF01517.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/72 (79%), Positives = 64/72 (88%)
 Frame = -1

Query: 218 GTELHCLKEHGEVLRLQFLKNNFLLASINENGRLHYQDVTMGEMVGNYRTGLGPTDVMKV 39
           G ELHCLKEHG V RLQFLKN+FLLASIN+ G+L YQDVTMGEM+ N+RTGLG TDVM+ 
Sbjct: 187 GVELHCLKEHGAVTRLQFLKNHFLLASINKFGQLRYQDVTMGEMISNFRTGLGRTDVMQA 246

Query: 38  NPYNGVVALGHS 3
           NP+NGVVALGHS
Sbjct: 247 NPFNGVVALGHS 258


Top