BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022343
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   379   e-103
ref|XP_002305019.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
ref|XP_002329765.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101
ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II tra...   372   e-101
ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra...   372   e-101

>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
            gi|223541698|gb|EEF43246.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1255

 Score =  379 bits (973), Expect = e-103
 Identities = 192/265 (72%), Positives = 216/265 (81%)
 Frame = -3

Query: 800  KAVSVSTLSDKQHTSNSHAEKAKRISFDPLDLPSDVRTLARIVYSPHGGEAAVSFLDGRV 621
            + VS     D +  S+S  EKAK ++FDP DLPSDVR+LARIVYS HGGE A++FL G V
Sbjct: 522  QTVSAGPAPDARKASDSGVEKAKSLTFDPFDLPSDVRSLARIVYSAHGGEIAIAFLRGGV 581

Query: 620  HIFSGASFAPVDNYAGNVDSAIAAPIFSSTGCCLASVWHDTRKDRTTLKITRVLPPAVPN 441
            HIFSG +F PVD+Y  NV SAIAAP FSST CC ASVWHDT KDRT LKI RVLPPAVP+
Sbjct: 582  HIFSGPNFTPVDSYQINVGSAIAAPAFSSTSCCSASVWHDTSKDRTILKIIRVLPPAVPS 641

Query: 440  SKLKINSSTWERAIADRFWWSLXXXXXXXXXXGCTQSAVEDGLVSLNSVIAVLDADFHSL 261
            S++K NSSTWERAIA+RFWWSL          GCTQSA ED +VSLNSVIAVLDADFHSL
Sbjct: 642  SQVKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDNIVSLNSVIAVLDADFHSL 701

Query: 260  SSSQHREQHRPSLDRIKCRLLEGTSGQEVRALVLDMQARLLLDMLGKGIESALINPATLV 81
             S+QHR+Q+ PSLDRIKCRLLEGT+ QEVRA+VLDMQARLLLDMLGKGIESALINP+ LV
Sbjct: 702  PSTQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALV 761

Query: 80   SEPWQASGEMLSGIEFDAMTVEPAL 6
             EPWQASGE LSGI+ +AM VEP+L
Sbjct: 762  PEPWQASGETLSGIDPEAMAVEPSL 786


>ref|XP_002305019.1| predicted protein [Populus trichocarpa] gi|222847983|gb|EEE85530.1|
            predicted protein [Populus trichocarpa]
          Length = 741

 Score =  376 bits (965), Expect = e-102
 Identities = 196/268 (73%), Positives = 220/268 (82%), Gaps = 1/268 (0%)
 Frame = -3

Query: 806  LQKAVSVSTLSDKQHTSNSHAEKAKRISFDPLDLPSDVRTLARIVYSPHGGEAAVSFLDG 627
            LQ A +V  +SD +  S+S +EK KR++FDP DLPSDVRTLARIVYS HGGE A++FL G
Sbjct: 413  LQAAPAVP-ISDARKASDSGSEKTKRVTFDPSDLPSDVRTLARIVYSAHGGEIAIAFLRG 471

Query: 626  RVHIFSGASFAPVDNYAGNVDSAIAAPIFSSTGCCLASVWHDTRKDRTTLKITRVLPPAV 447
             VHIFSG +F  VDNY  NV SAIAAP FSST CC ASVWHDT KDRT LKI RVLPPAV
Sbjct: 472  GVHIFSGPNFTVVDNYQINVGSAIAAPAFSSTSCCSASVWHDTSKDRTVLKIIRVLPPAV 531

Query: 446  PNSKLKINSSTWERAIAD-RFWWSLXXXXXXXXXXGCTQSAVEDGLVSLNSVIAVLDADF 270
            P+S++K NS+ WERAIA+ RFWWSL          GCTQSA EDG+VSLNSVIAVLDADF
Sbjct: 532  PSSQVKANSAIWERAIAESRFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADF 591

Query: 269  HSLSSSQHREQHRPSLDRIKCRLLEGTSGQEVRALVLDMQARLLLDMLGKGIESALINPA 90
            HSL S+QHR+Q+ PSLDRIKCRLLEGT+ QEVRA+VLDMQARLLLDMLGKGIESALINP+
Sbjct: 592  HSLPSTQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPS 651

Query: 89   TLVSEPWQASGEMLSGIEFDAMTVEPAL 6
             LV EPWQASGE LSGI+ +AMTVEP L
Sbjct: 652  ALVPEPWQASGETLSGIDPEAMTVEPNL 679


>ref|XP_002329765.1| predicted protein [Populus trichocarpa] gi|222870827|gb|EEF07958.1|
            predicted protein [Populus trichocarpa]
          Length = 820

 Score =  373 bits (957), Expect = e-101
 Identities = 192/259 (74%), Positives = 214/259 (82%), Gaps = 1/259 (0%)
 Frame = -3

Query: 779  LSDKQHTSNSHAEKAKRISFDPLDLPSDVRTLARIVYSPHGGEAAVSFLDGRVHIFSGAS 600
            +SD + TS+S AEK KR+ FDP DLPSDVRTLARIVYS HGGE AV+FL G VHIFSG +
Sbjct: 500  ISDVRKTSDSGAEKTKRVIFDPSDLPSDVRTLARIVYSAHGGEIAVAFLGGGVHIFSGTN 559

Query: 599  FAPVDNYAGNVDSAIAAPIFSSTGCCLASVWHDTRKDRTTLKITRVLPPAVPNSKLKINS 420
            F  VDN+  NV S IAAP FSST CC ASVWHDT KD T LKI RVLPPAVP+S++K NS
Sbjct: 560  FTLVDNHQINVGSTIAAPAFSSTSCCSASVWHDTSKDHTVLKIIRVLPPAVPSSQVKANS 619

Query: 419  STWERAIAD-RFWWSLXXXXXXXXXXGCTQSAVEDGLVSLNSVIAVLDADFHSLSSSQHR 243
            + WERAIA+ RFWWSL          GCTQSA EDG+VSLNSVIAVLDADFHSL +SQHR
Sbjct: 620  AIWERAIAESRFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPTSQHR 679

Query: 242  EQHRPSLDRIKCRLLEGTSGQEVRALVLDMQARLLLDMLGKGIESALINPATLVSEPWQA 63
            +Q+ PSLDRIKCRLLEGT+ QEVRA+VLDMQARLLLDMLG+GIESALINP+ LVSEPWQA
Sbjct: 680  QQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGRGIESALINPSALVSEPWQA 739

Query: 62   SGEMLSGIEFDAMTVEPAL 6
            SGE LSGI+ +AMTVEP L
Sbjct: 740  SGETLSGIDPEAMTVEPNL 758


>ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like [Cucumis sativus]
          Length = 1143

 Score =  372 bits (955), Expect = e-101
 Identities = 192/266 (72%), Positives = 215/266 (80%)
 Frame = -3

Query: 803  QKAVSVSTLSDKQHTSNSHAEKAKRISFDPLDLPSDVRTLARIVYSPHGGEAAVSFLDGR 624
            Q AVS    SD +  S ++ +KAK++ FDP DLPSDVRTLARIVYS HGGE AV+FL G 
Sbjct: 407  QSAVSGPN-SDLRKLSGAYIDKAKKVCFDPFDLPSDVRTLARIVYSAHGGEIAVAFLCGG 465

Query: 623  VHIFSGASFAPVDNYAGNVDSAIAAPIFSSTGCCLASVWHDTRKDRTTLKITRVLPPAVP 444
            VHIFSG +FAPV+NY  NV  AIAAP FSST CC ASVWHD  KD T L+I RVLPPA P
Sbjct: 466  VHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVWHDVNKDCTMLRIIRVLPPAAP 525

Query: 443  NSKLKINSSTWERAIADRFWWSLXXXXXXXXXXGCTQSAVEDGLVSLNSVIAVLDADFHS 264
            +++LK NSSTWERAIA+RFWWSL          GCTQSA EDG+VS NSVIAVLDADFHS
Sbjct: 526  SNQLKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSPNSVIAVLDADFHS 585

Query: 263  LSSSQHREQHRPSLDRIKCRLLEGTSGQEVRALVLDMQARLLLDMLGKGIESALINPATL 84
            L SSQHR+Q+ PSLDRIKCRLLEGT+ QEVRA+VLDMQARLLLDMLGKGIESALINP+ L
Sbjct: 586  LPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSAL 645

Query: 83   VSEPWQASGEMLSGIEFDAMTVEPAL 6
            +SEPW ASGE LSGI+ +AM VEPAL
Sbjct: 646  LSEPWHASGETLSGIDPEAMAVEPAL 671


>ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like [Cucumis sativus]
          Length = 1220

 Score =  372 bits (955), Expect = e-101
 Identities = 192/266 (72%), Positives = 215/266 (80%)
 Frame = -3

Query: 803  QKAVSVSTLSDKQHTSNSHAEKAKRISFDPLDLPSDVRTLARIVYSPHGGEAAVSFLDGR 624
            Q AVS    SD +  S ++ +KAK++ FDP DLPSDVRTLARIVYS HGGE AV+FL G 
Sbjct: 484  QSAVSGPN-SDLRKLSGAYIDKAKKVCFDPFDLPSDVRTLARIVYSAHGGEIAVAFLCGG 542

Query: 623  VHIFSGASFAPVDNYAGNVDSAIAAPIFSSTGCCLASVWHDTRKDRTTLKITRVLPPAVP 444
            VHIFSG +FAPV+NY  NV  AIAAP FSST CC ASVWHD  KD T L+I RVLPPA P
Sbjct: 543  VHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVWHDVNKDCTMLRIIRVLPPAAP 602

Query: 443  NSKLKINSSTWERAIADRFWWSLXXXXXXXXXXGCTQSAVEDGLVSLNSVIAVLDADFHS 264
            +++LK NSSTWERAIA+RFWWSL          GCTQSA EDG+VS NSVIAVLDADFHS
Sbjct: 603  SNQLKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSPNSVIAVLDADFHS 662

Query: 263  LSSSQHREQHRPSLDRIKCRLLEGTSGQEVRALVLDMQARLLLDMLGKGIESALINPATL 84
            L SSQHR+Q+ PSLDRIKCRLLEGT+ QEVRA+VLDMQARLLLDMLGKGIESALINP+ L
Sbjct: 663  LPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSAL 722

Query: 83   VSEPWQASGEMLSGIEFDAMTVEPAL 6
            +SEPW ASGE LSGI+ +AM VEPAL
Sbjct: 723  LSEPWHASGETLSGIDPEAMAVEPAL 748