BLASTX nr result
ID: Cimicifuga21_contig00022335
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00022335
(1429 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15349.3| unnamed protein product [Vitis vinifera] 743 0.0
ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 728 0.0
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ... 661 0.0
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 645 0.0
ref|XP_003559979.1| PREDICTED: putative ATP-dependent helicase H... 637 e-180
>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
Length = 1188
Score = 743 bits (1919), Expect = 0.0
Identities = 367/468 (78%), Positives = 406/468 (86%)
Frame = +3
Query: 3 GVSRLYSHQAESIHASLSGKDVVVATMTSSGKSLCYNVPVLESLSQNLLSCALYLFPTKA 182
GV+RLYSHQAESI ASL GK+VVVATMTSSGKSLCYNVPVLE LSQNLLSCALYLFPTKA
Sbjct: 422 GVTRLYSHQAESIQASLGGKNVVVATMTSSGKSLCYNVPVLEVLSQNLLSCALYLFPTKA 481
Query: 183 LAQDQIRALSVMTEGMDMSFNVGVYDGDTSQEDRMWLRDNARLLITNPDMLHMSILPSHT 362
LAQDQ+RAL MT+G D+S +GVYDGDTS+EDRMWLRDNARLLITNPDMLHMSILP H
Sbjct: 482 LAQDQLRALLAMTKGSDVSLKMGVYDGDTSEEDRMWLRDNARLLITNPDMLHMSILPFHG 541
Query: 363 QFQRILSNLRFVVIDEAHTYKGAFGCHTAXXXXXXXXXXXHVYGSDPSFIFCTATSANPR 542
QF+RILSNLRFV+IDEAH YKGAFGCHTA HVYGSDPSFIFCTATSANPR
Sbjct: 542 QFRRILSNLRFVIIDEAHAYKGAFGCHTAFILRRLRRLCHHVYGSDPSFIFCTATSANPR 601
Query: 543 EHAMELAGLPKLDLIQNDGSPSGPKLFVMWNPPLRWTTVDAFPLVSKASSGIGKSITADK 722
+HAMELA LP L+LI NDGSPSGPK F +WNP L TV S +S+ I KS +
Sbjct: 602 DHAMELANLPTLELIHNDGSPSGPKFFALWNPALCSKTVSKR---STSSTNISKSADENV 658
Query: 723 ELRRSSPVLEFSFIFAEMVQHGLRCIAFCKSRKLCELVLSYTREILRETAPLLVDSICSY 902
++RSSP+ E S +FAEM+QHGLRCIAFCKSRKLCELVLSYTREIL+ETAP LVDSIC+Y
Sbjct: 659 IVKRSSPIWEISCLFAEMIQHGLRCIAFCKSRKLCELVLSYTREILQETAPHLVDSICAY 718
Query: 903 RGGYVAEDRRRIESEFFGGKLRGVAATNALELGIDVGYIDATLHLGFPGSVSSLWQQAGR 1082
R GYVA+DRRRIES+FF GKL G+AATNALELGIDVG+ID TLHLGFPGS++SLWQQAGR
Sbjct: 719 RAGYVAQDRRRIESDFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGR 778
Query: 1083 SGRRERPSLAVYVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQNKQVLEQHLVCAAVEHP 1262
SGRRERPSLA+YVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQN+QVLEQHLVCAA+EHP
Sbjct: 779 SGRRERPSLAIYVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQNQQVLEQHLVCAALEHP 838
Query: 1263 LSLIHDETYFGPGLDSSITALTKKGYLSSDPSRDSPARIWSYIGQEVI 1406
LSL++DE YFG GL+S+IT+LT +GYLS DPSR S +RIW+YIG I
Sbjct: 839 LSLLYDEKYFGSGLNSAITSLTNRGYLSFDPSRGSSSRIWNYIGHAKI 886
>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
HRQ1-like [Vitis vinifera]
Length = 1231
Score = 728 bits (1880), Expect = 0.0
Identities = 361/468 (77%), Positives = 396/468 (84%)
Frame = +3
Query: 3 GVSRLYSHQAESIHASLSGKDVVVATMTSSGKSLCYNVPVLESLSQNLLSCALYLFPTKA 182
GV+RLYSHQAESI ASL GK+VVVATMTSSGKSLCYNVPVLE LSQNLLSCALYLFPTKA
Sbjct: 482 GVTRLYSHQAESIQASLGGKNVVVATMTSSGKSLCYNVPVLEVLSQNLLSCALYLFPTKA 541
Query: 183 LAQDQIRALSVMTEGMDMSFNVGVYDGDTSQEDRMWLRDNARLLITNPDMLHMSILPSHT 362
LAQDQ+RAL MT+G D+S +GVYDGDTS+EDRMWLRDNARLLITNPDMLHMSILP H
Sbjct: 542 LAQDQLRALLAMTKGSDVSLKMGVYDGDTSEEDRMWLRDNARLLITNPDMLHMSILPFHG 601
Query: 363 QFQRILSNLRFVVIDEAHTYKGAFGCHTAXXXXXXXXXXXHVYGSDPSFIFCTATSANPR 542
QF+RILSNLRFV+IDEAH YKGAFGCHTA HVYGSDPSFIFCTATSANPR
Sbjct: 602 QFRRILSNLRFVIIDEAHAYKGAFGCHTAFILRRLRRLCHHVYGSDPSFIFCTATSANPR 661
Query: 543 EHAMELAGLPKLDLIQNDGSPSGPKLFVMWNPPLRWTTVDAFPLVSKASSGIGKSITADK 722
+HAMELA LP L+LI NDGSPSGPK F +WNP L TV F +
Sbjct: 662 DHAMELANLPTLELIHNDGSPSGPKFFALWNPALCSKTVGCFNICFXFLC---------- 711
Query: 723 ELRRSSPVLEFSFIFAEMVQHGLRCIAFCKSRKLCELVLSYTREILRETAPLLVDSICSY 902
SP+ E S +FAEM+QHGLRCIAFCKSRKLCELVLSYTREIL+ETAP LVDSIC+Y
Sbjct: 712 ----CSPIWEISCLFAEMIQHGLRCIAFCKSRKLCELVLSYTREILQETAPHLVDSICAY 767
Query: 903 RGGYVAEDRRRIESEFFGGKLRGVAATNALELGIDVGYIDATLHLGFPGSVSSLWQQAGR 1082
R GYVA+DRRRIES+FF GKL G+AATNALELGIDVG+ID TLHLGFPGS++SLWQQAGR
Sbjct: 768 RAGYVAQDRRRIESDFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGR 827
Query: 1083 SGRRERPSLAVYVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQNKQVLEQHLVCAAVEHP 1262
SGRRERPSLA+YVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQN+QVLEQHLVCAA+EHP
Sbjct: 828 SGRRERPSLAIYVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQNQQVLEQHLVCAALEHP 887
Query: 1263 LSLIHDETYFGPGLDSSITALTKKGYLSSDPSRDSPARIWSYIGQEVI 1406
LSL++DE YFG GL+S+IT+LT +GYLS DPSR S +RIW+YIG I
Sbjct: 888 LSLLYDEKYFGSGLNSAITSLTNRGYLSFDPSRGSSSRIWNYIGHAKI 935
>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 1189
Score = 661 bits (1706), Expect = 0.0
Identities = 333/466 (71%), Positives = 370/466 (79%)
Frame = +3
Query: 3 GVSRLYSHQAESIHASLSGKDVVVATMTSSGKSLCYNVPVLESLSQNLLSCALYLFPTKA 182
G+++LYSHQA+SI ASL+ K+VVV+TMTSSGKSLCYNVPVLE LSQNL SCALYLFPTKA
Sbjct: 443 GITKLYSHQAKSIMASLARKNVVVSTMTSSGKSLCYNVPVLEVLSQNLSSCALYLFPTKA 502
Query: 183 LAQDQIRALSVMTEGMDMSFNVGVYDGDTSQEDRMWLRDNARLLITNPDMLHMSILPSHT 362
LAQDQ+RAL M + D S N+G+YDGDTSQ +R WLRDNARLLITNPDMLHMSILP H
Sbjct: 503 LAQDQLRALLAMAKEFDTSINIGIYDGDTSQTERPWLRDNARLLITNPDMLHMSILPFHR 562
Query: 363 QFQRILSNLRFVVIDEAHTYKGAFGCHTAXXXXXXXXXXXHVYGSDPSFIFCTATSANPR 542
QF RILSNLRFVVIDEAH YKGAFGCHTA HVYGSDPSFIF TATSANP
Sbjct: 563 QFSRILSNLRFVVIDEAHYYKGAFGCHTALILRRLRRICSHVYGSDPSFIFSTATSANPH 622
Query: 543 EHAMELAGLPKLDLIQNDGSPSGPKLFVMWNPPLRWTTVDAFPLVSKASSGIGKSITADK 722
EH MELA L LDLI DGSPS KLF +WNP + + F
Sbjct: 623 EHCMELANLSTLDLINIDGSPSTKKLFALWNPIVCALLLSFF------------------ 664
Query: 723 ELRRSSPVLEFSFIFAEMVQHGLRCIAFCKSRKLCELVLSYTREILRETAPLLVDSICSY 902
+P+ E S++FAEM+QHGLRCIAFCKSRKL ELVLSYTREIL++TAP LV+ IC+Y
Sbjct: 665 ----DNPISEVSYLFAEMIQHGLRCIAFCKSRKLTELVLSYTREILQKTAPHLVNLICAY 720
Query: 903 RGGYVAEDRRRIESEFFGGKLRGVAATNALELGIDVGYIDATLHLGFPGSVSSLWQQAGR 1082
RGGY E+RR+IE EFF G L G+AATNALELGIDVG+IDATLHLGFPGS+SSLWQQAGR
Sbjct: 721 RGGYAPEERRKIEREFFSGTLCGIAATNALELGIDVGHIDATLHLGFPGSISSLWQQAGR 780
Query: 1083 SGRRERPSLAVYVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQNKQVLEQHLVCAAVEHP 1262
SGRRE+PSLAVYVAFEGPLDQYFMK P+KLF PIECCHVDAQN++VLEQHLVCAA+EHP
Sbjct: 781 SGRREKPSLAVYVAFEGPLDQYFMKHPKKLFNNPIECCHVDAQNEKVLEQHLVCAALEHP 840
Query: 1263 LSLIHDETYFGPGLDSSITALTKKGYLSSDPSRDSPARIWSYIGQE 1400
L+L HDE YFG GL S+ +L KGYLS DPS S ARIWSYIG E
Sbjct: 841 LNLPHDEKYFGSGLSKSLMSLKSKGYLSYDPSCGSSARIWSYIGHE 886
>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
HRQ1-like [Cucumis sativus]
Length = 1218
Score = 645 bits (1665), Expect = 0.0
Identities = 318/466 (68%), Positives = 374/466 (80%)
Frame = +3
Query: 3 GVSRLYSHQAESIHASLSGKDVVVATMTSSGKSLCYNVPVLESLSQNLLSCALYLFPTKA 182
GV++LYSHQA SI ASL+GK V VATMTSSGKSLCYN+PVLE++SQN+ SCALYLFPTKA
Sbjct: 481 GVAKLYSHQARSIEASLAGKHVAVATMTSSGKSLCYNLPVLEAMSQNVSSCALYLFPTKA 540
Query: 183 LAQDQIRALSVMTEGMDMSFNVGVYDGDTSQEDRMWLRDNARLLITNPDMLHMSILPSHT 362
LAQDQ+R+L VM +G + + N+GVYDGDTS DR+ LRDNARLLITNPDMLH+SILP H
Sbjct: 541 LAQDQLRSLLVMMKGFNHNLNIGVYDGDTSLADRILLRDNARLLITNPDMLHVSILPHHR 600
Query: 363 QFQRILSNLRFVVIDEAHTYKGAFGCHTAXXXXXXXXXXXHVYGSDPSFIFCTATSANPR 542
QF RILSNLRF+VIDEAHTYKGAFGCHTA HVYGSDPSFIFCTATSANPR
Sbjct: 601 QFGRILSNLRFIVIDEAHTYKGAFGCHTALILRRLRRLCSHVYGSDPSFIFCTATSANPR 660
Query: 543 EHAMELAGLPKLDLIQNDGSPSGPKLFVMWNPPLRWTTVDAFPLVSKASSGIGKSITADK 722
EH MEL L L+LI NDGSPS KLF++WNP V G+ I
Sbjct: 661 EHCMELGNLSSLELIDNDGSPSARKLFLLWNP------------VMVLFVGLSTXIFT-- 706
Query: 723 ELRRSSPVLEFSFIFAEMVQHGLRCIAFCKSRKLCELVLSYTREILRETAPLLVDSICSY 902
+P+++ + +FAEMVQHGLRCIAFCK+RKLCELVL YTREIL+E+AP LV S+C+Y
Sbjct: 707 ----MNPIMDIARLFAEMVQHGLRCIAFCKTRKLCELVLCYTREILKESAPHLVQSVCAY 762
Query: 903 RGGYVAEDRRRIESEFFGGKLRGVAATNALELGIDVGYIDATLHLGFPGSVSSLWQQAGR 1082
R GY AEDRRRIES+FFGG L GVAATNALELGIDVG+IDATLHLGFPGS++SLWQQAGR
Sbjct: 763 RAGYTAEDRRRIESDFFGGNLCGVAATNALELGIDVGHIDATLHLGFPGSIASLWQQAGR 822
Query: 1083 SGRRERPSLAVYVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQNKQVLEQHLVCAAVEHP 1262
+GRRE+ SL+VYVAFEGPLDQYFMK P+KLF PIECCH+DA+N+QVLEQHL+CAA EHP
Sbjct: 823 AGRREKTSLSVYVAFEGPLDQYFMKHPEKLFGSPIECCHIDAENQQVLEQHLLCAAYEHP 882
Query: 1263 LSLIHDETYFGPGLDSSITALTKKGYLSSDPSRDSPARIWSYIGQE 1400
+ L +D+ +FGPGL++++ +L +G L +PS S IW+YIGQ+
Sbjct: 883 VCLAYDQKFFGPGLNNALMSLKNRGDLIPEPSCGSSKSIWNYIGQK 928
>ref|XP_003559979.1| PREDICTED: putative ATP-dependent helicase HRQ1-like [Brachypodium
distachyon]
Length = 1015
Score = 637 bits (1644), Expect = e-180
Identities = 310/466 (66%), Positives = 372/466 (79%)
Frame = +3
Query: 3 GVSRLYSHQAESIHASLSGKDVVVATMTSSGKSLCYNVPVLESLSQNLLSCALYLFPTKA 182
G+SRLYSHQ+E+I +S+SGK VVVAT T+SGKSLCYN+PVLESLSQ+ ++CALY+FPTKA
Sbjct: 265 GISRLYSHQSEAIQSSISGKHVVVATSTASGKSLCYNIPVLESLSQDSMACALYIFPTKA 324
Query: 183 LAQDQIRALSVMTEGMDMSFNVGVYDGDTSQEDRMWLRDNARLLITNPDMLHMSILPSHT 362
LAQDQ+R+L M + +YDGDT + DR+W+RDNARLLITNPDMLH+S+LP H
Sbjct: 325 LAQDQLRSLVEMKNAFHTDIDAKIYDGDTPRADRLWIRDNARLLITNPDMLHVSVLPCHA 384
Query: 363 QFQRILSNLRFVVIDEAHTYKGAFGCHTAXXXXXXXXXXXHVYGSDPSFIFCTATSANPR 542
QFQRILSNLR++VIDEAH+YKGAFGCHTA +VYGS P+F+FCTATSA+PR
Sbjct: 385 QFQRILSNLRYIVIDEAHSYKGAFGCHTALILRRLKRICSNVYGSHPTFLFCTATSASPR 444
Query: 543 EHAMELAGLPKLDLIQNDGSPSGPKLFVMWNPPLRWTTVDAFPLVSKASSGIGKSITADK 722
EH MELA L +LIQNDGSP G K F++WNPPLR + K G S+
Sbjct: 445 EHVMELAKLDNAELIQNDGSPCGSKFFLLWNPPLR---------MPKEGDSKGSSV---- 491
Query: 723 ELRRSSPVLEFSFIFAEMVQHGLRCIAFCKSRKLCELVLSYTREILRETAPLLVDSICSY 902
+RRSSP++E S++F+EMVQHGLRCIAFCK+RKLCELVLSYTREIL+ETA LVDSIC Y
Sbjct: 492 -IRRSSPIVEVSYLFSEMVQHGLRCIAFCKTRKLCELVLSYTREILQETAKELVDSICVY 550
Query: 903 RGGYVAEDRRRIESEFFGGKLRGVAATNALELGIDVGYIDATLHLGFPGSVSSLWQQAGR 1082
R GY+AEDRR+IE++ F GKLRGVAATNALELGIDVG+IDATLHLGFPGSV+SLWQQAGR
Sbjct: 551 RAGYIAEDRRKIETDLFEGKLRGVAATNALELGIDVGHIDATLHLGFPGSVASLWQQAGR 610
Query: 1083 SGRRERPSLAVYVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQNKQVLEQHLVCAAVEHP 1262
SGRR + SLA+YVAFEGPLDQYFMKFP KLF +PIE C VD+ N +VLEQHL CAA EHP
Sbjct: 611 SGRRAKQSLAIYVAFEGPLDQYFMKFPHKLFGKPIEHCQVDSHNPKVLEQHLACAAFEHP 670
Query: 1263 LSLIHDETYFGPGLDSSITALTKKGYLSSDPSRDSPARIWSYIGQE 1400
+ L +DE +FG L S +T L +KGYL ++PS + +W+Y+G E
Sbjct: 671 ICLQYDENHFGSNLHSVMTTLKEKGYLINNPSGPFSSTMWNYVGPE 716