BLASTX nr result

ID: Cimicifuga21_contig00022334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022334
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   126   2e-27
ref|XP_004155039.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   126   2e-27
ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   123   1e-26
emb|CBI15349.3| unnamed protein product [Vitis vinifera]              123   1e-26

>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
            HRQ1-like [Cucumis sativus]
          Length = 1218

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/99 (61%), Positives = 73/99 (73%), Gaps = 5/99 (5%)
 Frame = -2

Query: 283  QVYEGAVYMQQGKTYLVKDLDVFDKIAVCEEANLTYYTKTRDYTDVHVVDGDFAYP---- 116
            QVYEGAVYM QG+TYLVK L++   +A CEEA+L YYTKTRDYTD+HV+ G+ AYP    
Sbjct: 967  QVYEGAVYMHQGRTYLVKSLNLSTMLAFCEEADLKYYTKTRDYTDIHVIGGNLAYPRRAP 1026

Query: 115  -VIQYSTTAQARTCEVTTTWFGFFRILRGSNTILNEESL 2
             +    TTAQA  C VTTTWFGF+RI +GSN IL+   L
Sbjct: 1027 NIPPSKTTAQANDCRVTTTWFGFYRIQKGSNQILDSVDL 1065


>ref|XP_004155039.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Cucumis sativus]
          Length = 663

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/97 (61%), Positives = 73/97 (75%), Gaps = 5/97 (5%)
 Frame = -2

Query: 283 QVYEGAVYMQQGKTYLVKDLDVFDKIAVCEEANLTYYTKTRDYTDVHVVDGDFAYP---- 116
           QVYEGAVYM QG+TYLVK L++   +A CEEA+L YYTKTRDYTD+HV+ G+ AYP    
Sbjct: 547 QVYEGAVYMHQGRTYLVKSLNLSTMLAFCEEADLKYYTKTRDYTDIHVIGGNLAYPRRAP 606

Query: 115 -VIQYSTTAQARTCEVTTTWFGFFRILRGSNTILNEE 8
            +    TTAQA  C VTTTWFGF+RI +GSN IL+ +
Sbjct: 607 NIPPSKTTAQANDCRVTTTWFGFYRIQKGSNQILDSK 643


>ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|222859250|gb|EEE96797.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/95 (63%), Positives = 73/95 (76%), Gaps = 5/95 (5%)
 Frame = -2

Query: 283 QVYEGAVYMQQGKTYLVKDLDVFDKIAVCEEANLTYYTKTRDYTDVHVVDGDFAYPVIQY 104
           Q+YEGAVYM QGKTY+VK LD+ +KIA+C EANL YYTKTRDYTD+ V+ GD AYP   +
Sbjct: 204 QIYEGAVYMHQGKTYMVKKLDISEKIALCYEANLHYYTKTRDYTDIDVLGGDIAYPPRAF 263

Query: 103 S-----TTAQARTCEVTTTWFGFFRILRGSNTILN 14
                 T AQA +C+VTTTWFGF+ I RGSN +L+
Sbjct: 264 KNQSSRTAAQALSCKVTTTWFGFYCIQRGSNKVLD 298


>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
            HRQ1-like [Vitis vinifera]
          Length = 1231

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/99 (59%), Positives = 75/99 (75%), Gaps = 5/99 (5%)
 Frame = -2

Query: 283  QVYEGAVYMQQGKTYLVKDLDVFDKIAVCEEANLTYYTKTRDYTDVHVVDGDFAYPV--- 113
            QVY+GAVYM QGKTYLVK+LD+  K+A+C++A+L YYTKTRDYTD+HV+ G+ AY     
Sbjct: 972  QVYDGAVYMHQGKTYLVKELDISRKLALCQQADLKYYTKTRDYTDIHVIGGEIAYQARIS 1031

Query: 112  -IQYS-TTAQARTCEVTTTWFGFFRILRGSNTILNEESL 2
             IQ++ TTAQ   C VTTTWFGF RI +GSN + +   L
Sbjct: 1032 RIQFARTTAQVHDCRVTTTWFGFRRIWKGSNKVFDTVEL 1070


>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/99 (59%), Positives = 75/99 (75%), Gaps = 5/99 (5%)
 Frame = -2

Query: 283  QVYEGAVYMQQGKTYLVKDLDVFDKIAVCEEANLTYYTKTRDYTDVHVVDGDFAYPV--- 113
            QVY+GAVYM QGKTYLVK+LD+  K+A+C++A+L YYTKTRDYTD+HV+ G+ AY     
Sbjct: 923  QVYDGAVYMHQGKTYLVKELDISRKLALCQQADLKYYTKTRDYTDIHVIGGEIAYQARIS 982

Query: 112  -IQYS-TTAQARTCEVTTTWFGFFRILRGSNTILNEESL 2
             IQ++ TTAQ   C VTTTWFGF RI +GSN + +   L
Sbjct: 983  RIQFARTTAQVHDCRVTTTWFGFRRIWKGSNKVFDTVEL 1021


Top