BLASTX nr result

ID: Cimicifuga21_contig00022330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022330
         (1260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326038.1| predicted protein [Populus trichocarpa] gi|2...   205   2e-50
ref|XP_002530316.1| zinc finger protein, putative [Ricinus commu...   196   1e-47
ref|XP_002327310.1| predicted protein [Populus trichocarpa] gi|2...   192   1e-46
ref|XP_002530314.1| zinc finger protein, putative [Ricinus commu...   191   3e-46
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   185   2e-44

>ref|XP_002326038.1| predicted protein [Populus trichocarpa] gi|222862913|gb|EEF00420.1|
            predicted protein [Populus trichocarpa]
          Length = 241

 Score =  205 bits (521), Expect = 2e-50
 Identities = 102/230 (44%), Positives = 137/230 (59%), Gaps = 6/230 (2%)
 Frame = +1

Query: 352  MEMPEIT----VEDNHQQEASRFTCEICIEPIYSSERFKNN-TCHASYCSNCIAKYIEAK 516
            M+ P+ T     E   Q+E S FTCEIC +P+ S+  FKN   C   +C +CI KYIE  
Sbjct: 5    MQKPQGTEVEGTEQLQQEEDSNFTCEICSDPMLSTRNFKNGIVCKHPFCLDCITKYIEIT 64

Query: 517  IEEYNTADIKCPGLDCNELLDPLACHPILPPRVFDRWCDALCESSVLGMECERSNCPYSD 696
            +EE  +  I+CPGL+C +LLDPL+C PI+   +F++WCD LC+S VLG E     CPY D
Sbjct: 65   VEE-TSGCIECPGLNCKQLLDPLSCRPIISKPIFEKWCDRLCDSMVLGSES--CYCPYRD 121

Query: 697  CSAVYLAKCK-RITKTSCSKCNRIFCFKCKVPWDHGHDCLKHIGLENGDDVLAVSLAAVK 873
            CS + L +CK ++ K +C  C + FCF CK+PW  G+ C +   L + +D+LA  L   K
Sbjct: 122  CSVLVLNECKDKLKKINCPNCKKNFCFLCKIPWHTGYRCSESRHLRDRNDILAGELIEEK 181

Query: 874  KWRRCPGCHIIVEKRSGCSSMKCRCGTMFSYDSGKLYSYPGSYYCKCDRC 1023
            KW RC  C   VE+ SGC  +KCRCG  F +  G  +    S  CK  RC
Sbjct: 182  KWTRCYNCSHSVERVSGCRDIKCRCGFRFCHQCGGPFH---SGLCKHKRC 228


>ref|XP_002530316.1| zinc finger protein, putative [Ricinus communis]
           gi|223530172|gb|EEF32083.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 255

 Score =  196 bits (498), Expect = 1e-47
 Identities = 95/214 (44%), Positives = 134/214 (62%), Gaps = 6/214 (2%)
 Frame = +1

Query: 352 MEMPEIT--VEDNHQQE--ASRFTCEICIEPIYSSERFKN-NTCHASYCSNCIAKYIEAK 516
           ++ P+ T  VE++ Q+E   S FTCEICIEP+ S+++F+N + C   +C +CI+KY+E K
Sbjct: 5   LQKPQETNVVEEHEQKEEVVSSFTCEICIEPMLSNKKFENASLCTHPFCLDCISKYVEVK 64

Query: 517 IEEYNTADIKCPGLDCNELLDPLACHPILPPRVFDRWCDALCESSVLGMECERSNCPYSD 696
           +E +   +IKCPG  C   LDPL+C  I+   VFD+WCD LC+S V G+E  R  CPY D
Sbjct: 65  VEGF-IGNIKCPGTSCKHPLDPLSCRSIISKPVFDKWCDLLCDSVVSGVE--RCYCPYRD 121

Query: 697 CSAVYLAKCK-RITKTSCSKCNRIFCFKCKVPWDHGHDCLKHIGLENGDDVLAVSLAAVK 873
           CSA+ L +CK ++ K  C  C +  C+ CK+PW  G+ C +   L + +DVL   L   K
Sbjct: 122 CSALVLNECKDKLKKIKCPNCKKNLCYVCKIPWHAGYQCNESGQLRDRNDVLIGELIEEK 181

Query: 874 KWRRCPGCHIIVEKRSGCSSMKCRCGTMFSYDSG 975
           KW RC  C   VE+ SGC  +KC+CG  F +  G
Sbjct: 182 KWTRCYNCGHSVERVSGCRDVKCKCGVRFCHQCG 215


>ref|XP_002327310.1| predicted protein [Populus trichocarpa] gi|222835680|gb|EEE74115.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  192 bits (489), Expect = 1e-46
 Identities = 89/198 (44%), Positives = 123/198 (62%), Gaps = 2/198 (1%)
 Frame = +1

Query: 388 QQEASRFTCEICIEPIYSSERFKNNT-CHASYCSNCIAKYIEAKIEEYNTADIKCPGLDC 564
           Q+E S FTCEIC EP+ +  +FKN + C   +C +CIAKYIE  +EE +T  I+CPGL+C
Sbjct: 21  QEEDSNFTCEICTEPMLAIRKFKNGSLCKHPFCLDCIAKYIEVTVEE-STGCIECPGLNC 79

Query: 565 NELLDPLACHPILPPRVFDRWCDALCESSVLGMECERSNCPYSDCSAVYLAKCK-RITKT 741
            + LDPL+C  I+   +F++WCD LC+S+VLG E     CPY DCS + L +C   + K 
Sbjct: 80  KQPLDPLSCRRIISKPIFEKWCDHLCDSTVLGSES--CYCPYRDCSVLVLNECMDNLKKI 137

Query: 742 SCSKCNRIFCFKCKVPWDHGHDCLKHIGLENGDDVLAVSLAAVKKWRRCPGCHIIVEKRS 921
            C  C + FCF CK+PW  G+ C +   L + +D+L   L   K+W RC  C   VE+ S
Sbjct: 138 KCPNCKKNFCFLCKIPWHAGYRCNESRHLRDRNDILVGELIEEKRWTRCYNCGHSVERVS 197

Query: 922 GCSSMKCRCGTMFSYDSG 975
           GC  +KC+CG  F +  G
Sbjct: 198 GCRDIKCKCGVQFCHQCG 215


>ref|XP_002530314.1| zinc finger protein, putative [Ricinus communis]
           gi|223530170|gb|EEF32081.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 213

 Score =  191 bits (486), Expect = 3e-46
 Identities = 88/193 (45%), Positives = 123/193 (63%), Gaps = 3/193 (1%)
 Frame = +1

Query: 406 FTCEICIEPIYSSERFKN-NTCHASYCSNCIAKYIEAKIEEYNTADIKCPGLDCNELLDP 582
           FTCEICIEP  S+ +FKN N C   +C++CIAKY+E K+ + N A+IKCP L C+  L+P
Sbjct: 7   FTCEICIEPTLSNRKFKNGNGCTHPFCNDCIAKYVEVKVID-NVANIKCPSLGCDRPLEP 65

Query: 583 LACHPILPPRVFDRWCDALCESSVLGMECERSNCPYSDCSAVYLAKCK--RITKTSCSKC 756
            +C  ++P  +FD+W D LCE  VL  E ER  CPY +CSA+ L +C+  ++ K +C  C
Sbjct: 66  TSCMALIPKAIFDKWSDLLCEVRVL--EWERCYCPYENCSALILNECRYHKVKKVTCPNC 123

Query: 757 NRIFCFKCKVPWDHGHDCLKHIGLENGDDVLAVSLAAVKKWRRCPGCHIIVEKRSGCSSM 936
            + FCF CK+PW  G+ C +   L +G+DVLA  L   ++W RC  C   VE+  GC  +
Sbjct: 124 KKNFCFNCKIPWHGGYWCRESRQLRDGNDVLAGELIENQRWTRCYNCGHSVERVDGCKFI 183

Query: 937 KCRCGTMFSYDSG 975
            CRCG  F ++ G
Sbjct: 184 SCRCGVEFCHECG 196


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  185 bits (470), Expect = 2e-44
 Identities = 95/247 (38%), Positives = 133/247 (53%), Gaps = 6/247 (2%)
 Frame = +1

Query: 292  QVFDEMPKRDLQLNSQLPIVMEMPEITVEDNHQQEASRFTCEICIEPIYSSERFKNNTCH 471
            +V D +P+       + P  +E      + ++ Q    F C+IC+EP      F    C 
Sbjct: 60   KVLDFLPEVIPSRKQKEPTFIESVAEKGQSSNSQIDPDFVCQICVEPTILKNSFLIKGCT 119

Query: 472  ASYCSNCIAKYIEAKIEEYNTADIKCPGLDCNELLDPLACHPILPPRVFDRWCDALCESS 651
             +YC+ C+ KY+ +K++E N   I CP  DC   L+P  C  +LP  VFDRW +ALCE+ 
Sbjct: 120  HAYCTECMVKYVSSKLQE-NITKICCPVPDCKGALEPEDCRSVLPENVFDRWGNALCEAV 178

Query: 652  VLGMECERSNCPYSDCSAVYLAKCKRITKTS-CSKCNRIFCFKCKVPWDHGHDC----LK 816
            +LG +  +  CP+ DCSA+ +   + + + S C  C R+FC +CKVPW     C    + 
Sbjct: 179  ILGSQ--KFYCPFKDCSAMLIDDGEEVVRESECPNCWRMFCAQCKVPWHSQISCEEYKML 236

Query: 817  HIGLENGDDVLAVSLAAVKKWRRCPGCHIIVEKRSGCSSMKCRCGTMFSYDSGKLYSYPG 996
            H      DD+L ++LA  K WRRCP C I VEK  GC  MKCRCGT F Y  G     P 
Sbjct: 237  HKDERERDDILLMNLAKNKNWRRCPKCRIFVEKIEGCRYMKCRCGTQFCYSCGSTDLNPV 296

Query: 997  SYYC-KC 1014
            ++YC KC
Sbjct: 297  THYCYKC 303


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