BLASTX nr result
ID: Cimicifuga21_contig00022286
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00022286
(692 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002452608.1| hypothetical protein SORBIDRAFT_04g028970 [S... 141 3e-53
gb|AFW73259.1| hypothetical protein ZEAMMB73_606431 [Zea mays] 142 6e-53
ref|XP_003575540.1| PREDICTED: pentatricopeptide repeat-containi... 139 8e-52
ref|NP_001048017.1| Os02g0730900 [Oryza sativa Japonica Group] g... 135 1e-51
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212... 130 1e-50
>ref|XP_002452608.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
gi|241932439|gb|EES05584.1| hypothetical protein
SORBIDRAFT_04g028970 [Sorghum bicolor]
Length = 485
Score = 141 bits (355), Expect(2) = 3e-53
Identities = 62/113 (54%), Positives = 87/113 (76%)
Frame = +3
Query: 3 FQNIQSKNVGHWTSMIVGFAVHGYAEASLCLFSKMQNSGVKPNYVTFIGVLSACSHGGLV 182
F ++ +KNV HWTS+I GFA HG E +L LF++M+ G++PN VTF+ VL+AC+HGGLV
Sbjct: 251 FLSVTTKNVEHWTSLIAGFAAHGQPEKALRLFAEMRRVGIEPNGVTFVAVLNACNHGGLV 310
Query: 183 EQGIRHFNLMKTYNIEPRVQHYGCLVDLLGRSGLIKEAKILIDNVPMEPGAVM 341
+G ++F+LM++ I P +QHYGCLVDLLGR+G +KEA L N+P +PG V+
Sbjct: 311 SEGFKYFDLMRSMGIRPMIQHYGCLVDLLGRAGFLKEAFNLASNLPEDPGFVI 363
Score = 93.6 bits (231), Expect(2) = 3e-53
Identities = 43/100 (43%), Positives = 58/100 (58%)
Frame = +1
Query: 355 AACRNHGDIEIGQIAAQKLIELNPDYGGGYVLLSNLYADSCRWADFXXXXXXXXXXXVEK 534
AAC +HGD+E+ ++ A KL + P +G YVLLSN YA + +W D V K
Sbjct: 369 AACHSHGDVEMAELTASKLADAKPSHGSSYVLLSNTYARAKQWEDLRRTRRRMEEHGVTK 428
Query: 535 AAGLSWIEVDGEIHEFLMGDKFHPRSMEIYSLLDAIQCKL 654
GLSWIEVDG +H F DK H S +IY +L+ ++ L
Sbjct: 429 KPGLSWIEVDGGVHSFATADKLHMESEDIYQMLEDLKHNL 468
>gb|AFW73259.1| hypothetical protein ZEAMMB73_606431 [Zea mays]
Length = 488
Score = 142 bits (359), Expect(2) = 6e-53
Identities = 64/113 (56%), Positives = 87/113 (76%)
Frame = +3
Query: 3 FQNIQSKNVGHWTSMIVGFAVHGYAEASLCLFSKMQNSGVKPNYVTFIGVLSACSHGGLV 182
F ++ +KNV HWTS+I GFA HG E +L LF +M+ G++PN VTF+ VLSACSHGGLV
Sbjct: 255 FLSVTTKNVEHWTSLIAGFAAHGQPENALRLFVEMRQVGIEPNGVTFVAVLSACSHGGLV 314
Query: 183 EQGIRHFNLMKTYNIEPRVQHYGCLVDLLGRSGLIKEAKILIDNVPMEPGAVM 341
++G ++F+LM++ I P +QHYGCLVDLLGR+G +KEA L N+P +PG V+
Sbjct: 315 DEGFKYFDLMRSMGIRPMIQHYGCLVDLLGRAGFLKEAFNLASNLPEDPGFVI 367
Score = 91.3 bits (225), Expect(2) = 6e-53
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1
Query: 355 AACRNHGDIEIGQIAAQKLIELNPDYGGGYVLLSNLYADSCRWADFXXXXXXXXXXXVEK 534
AACR+HG++E+ ++ A KL E P +G YVLLSN YA + +W D V K
Sbjct: 373 AACRSHGNVEMAELTASKLAEAKPSHGSSYVLLSNTYARAEQWEDSKRTRRRMEEHRVAK 432
Query: 535 AAGLSWIEVDGEIHEFLMGDKFHPRSMEIYSLLDAIQ 645
GLSWIE+DG +H F DK H S IY +L+ ++
Sbjct: 433 KPGLSWIEIDGSVHSFATADKLHIESEGIYHMLEDLK 469
>ref|XP_003575540.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 491
Score = 139 bits (351), Expect(2) = 8e-52
Identities = 61/112 (54%), Positives = 86/112 (76%)
Frame = +3
Query: 3 FQNIQSKNVGHWTSMIVGFAVHGYAEASLCLFSKMQNSGVKPNYVTFIGVLSACSHGGLV 182
F ++ SKNV HWTS I GFA HG+ + +L LF++M+ G++PN VTF+ VL+ACSHGGLV
Sbjct: 259 FSSVTSKNVEHWTSAIGGFAAHGHPDMALRLFAEMRELGIEPNDVTFVAVLNACSHGGLV 318
Query: 183 EQGIRHFNLMKTYNIEPRVQHYGCLVDLLGRSGLIKEAKILIDNVPMEPGAV 338
++G ++FN+M+ I P +QHYGCLVDLLGR+G ++EA L ++P +PG V
Sbjct: 319 DEGFKYFNMMRKMGIRPSIQHYGCLVDLLGRAGFLEEAFNLASSLPKDPGFV 370
Score = 90.5 bits (223), Expect(2) = 8e-52
Identities = 41/100 (41%), Positives = 59/100 (59%)
Frame = +1
Query: 355 AACRNHGDIEIGQIAAQKLIELNPDYGGGYVLLSNLYADSCRWADFXXXXXXXXXXXVEK 534
AAC+ HG++++ ++AAQKL + P++G YVLLSN YA + +W D K
Sbjct: 377 AACQTHGNVDMAEVAAQKLADAEPNHGSSYVLLSNAYARAGQWEDLKRTRSRMEAHRAVK 436
Query: 535 AAGLSWIEVDGEIHEFLMGDKFHPRSMEIYSLLDAIQCKL 654
GLSWIEVDG +H F DK H + IY +L+ ++ L
Sbjct: 437 KPGLSWIEVDGSVHSFGTADKSHTENKGIYQMLENLKLNL 476
>ref|NP_001048017.1| Os02g0730900 [Oryza sativa Japonica Group]
gi|46390470|dbj|BAD15931.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|46390866|dbj|BAD16370.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|113537548|dbj|BAF09931.1|
Os02g0730900 [Oryza sativa Japonica Group]
gi|125541007|gb|EAY87402.1| hypothetical protein
OsI_08809 [Oryza sativa Indica Group]
gi|125583571|gb|EAZ24502.1| hypothetical protein
OsJ_08263 [Oryza sativa Japonica Group]
Length = 488
Score = 135 bits (340), Expect(2) = 1e-51
Identities = 60/113 (53%), Positives = 87/113 (76%)
Frame = +3
Query: 3 FQNIQSKNVGHWTSMIVGFAVHGYAEASLCLFSKMQNSGVKPNYVTFIGVLSACSHGGLV 182
F ++ SKNV WTS+I GFA HG+ E +L LF++M+ G++PN VTF+ VL+ACSHGGLV
Sbjct: 256 FSSVASKNVEQWTSVIGGFAAHGHPEMALRLFTEMRQLGIEPNGVTFLAVLNACSHGGLV 315
Query: 183 EQGIRHFNLMKTYNIEPRVQHYGCLVDLLGRSGLIKEAKILIDNVPMEPGAVM 341
+G ++FNLM++ I+ +QHYGCL+DLLGR+G ++EA L ++P +PG V+
Sbjct: 316 NEGFKYFNLMRSMGIKSTMQHYGCLIDLLGRAGFLEEAFELASSLPEDPGLVI 368
Score = 94.0 bits (232), Expect(2) = 1e-51
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +1
Query: 355 AACRNHGDIEIGQIAAQKLIELNPDYGGGYVLLSNLYADSCRWADFXXXXXXXXXXXVEK 534
AAC++HG++E+ ++AA+KL P +G YVLLSN YA + +W D V K
Sbjct: 374 AACQSHGNVEMAEVAARKLAHAEPRHGSSYVLLSNTYARAGQWEDLKRTRRKMEEYGVMK 433
Query: 535 AAGLSWIEVDGEIHEFLMGDKFHPRSMEIYSLLDAIQCKL 654
GLSWIE+DG +H F+ DK H S +IY +L+ ++ L
Sbjct: 434 QPGLSWIELDGRVHSFVSADKLHTESEDIYQMLEDLKVNL 473
>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 130 bits (328), Expect(2) = 1e-50
Identities = 63/126 (50%), Positives = 89/126 (70%), Gaps = 6/126 (4%)
Frame = +3
Query: 3 FQNIQSKNVGHWTSMIVGFAVHGYAEASLCLFSKMQNSGVKPNYVTFIGVLSACSHGGLV 182
F ++ KNV WT+M+ G+ +HG A+ +L +F KM +GVKPNY+TF+ VL+ACSH GLV
Sbjct: 2284 FDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLV 2343
Query: 183 EQGIRHFNLMK-TYNIEPRVQHYGCLVDLLGRSGLIKEAKILIDNVPMEP-----GAVMG 344
E+G FN MK Y+IEP ++HYGC+VDL GR+G + EA LI + M+P G+++G
Sbjct: 2344 EEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLG 2403
Query: 345 HIACRV 362
ACR+
Sbjct: 2404 --ACRI 2407
Score = 95.1 bits (235), Expect(2) = 1e-50
Identities = 47/100 (47%), Positives = 63/100 (63%)
Frame = +1
Query: 358 ACRNHGDIEIGQIAAQKLIELNPDYGGGYVLLSNLYADSCRWADFXXXXXXXXXXXVEKA 537
ACR H ++++G+IAAQKL EL+PD G YVLLSNLYAD+ RWAD + K
Sbjct: 2404 ACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKP 2463
Query: 538 AGLSWIEVDGEIHEFLMGDKFHPRSMEIYSLLDAIQCKLR 657
G S +E+ G +H FL+GDK HP IY L+ + +L+
Sbjct: 2464 PGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQ 2503
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Frame = +3
Query: 3 FQNIQSKNVGHWTSMIVGFAVHGYAEASLCLFSKMQNSGVKPNYVTFIGVLSACSHGGLV 182
F+ + K++ W SMI VHG + +L LFS+M+ VKP+ +TFIGVL AC H V
Sbjct: 315 FETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374
Query: 183 EQGIRHFNLM-KTYNIEPRVQHYGCLVDLLGRSGLIKEA 296
++G +F M + Y I P +HY C+ +L RS + EA
Sbjct: 375 KEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 57.4 bits (137), Expect = 3e-06
Identities = 34/106 (32%), Positives = 54/106 (50%)
Frame = +3
Query: 3 FQNIQSKNVGHWTSMIVGFAVHGYAEASLCLFSKMQNSGVKPNYVTFIGVLSACSHGGLV 182
F I SKNV WT+MI G+ + E +L LF +MQ + PN T + ++ AC+ G++
Sbjct: 214 FDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGIL 273
Query: 183 EQGIRHFNLMKTYNIEPRVQHYGCLVDLLGRSGLIKEAKILIDNVP 320
G + IE V L+D+ + G IK+A + + +P
Sbjct: 274 TLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319