BLASTX nr result

ID: Cimicifuga21_contig00022270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022270
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002468163.1| hypothetical protein SORBIDRAFT_01g040730 [S...    84   7e-14
tpg|DAA44445.1| TPA: hypothetical protein ZEAMMB73_228015 [Zea m...    82   3e-13
ref|XP_003561809.1| PREDICTED: uncharacterized protein LOC100841...    79   1e-12
gb|ABF95033.1| FAR1 family protein, expressed [Oryza sativa Japo...    78   4e-12
ref|NP_001049594.1| Os03g0255400 [Oryza sativa Japonica Group] g...    78   4e-12

>ref|XP_002468163.1| hypothetical protein SORBIDRAFT_01g040730 [Sorghum bicolor]
           gi|241922017|gb|EER95161.1| hypothetical protein
           SORBIDRAFT_01g040730 [Sorghum bicolor]
          Length = 663

 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
 Frame = +2

Query: 290 KPVEVELNEIKEPCVGMIFSSFQESKHFYDDYAQTKGFXXXXXXXXXXXXGQDVSSALLV 469
           KP  +E + ++EP  GM F S + +K FY +YA+  GF               + S  +V
Sbjct: 181 KPHSIEADPVQEPFEGMEFESEEAAKFFYVNYARLTGFRARISRYCRSRRDNSIISRQIV 240

Query: 470 CTCEGFNQKTTKS--DDEGKTRR-CTIVRTGCKASMRVTNIKGTTAWKITVFSNQHNHEL 640
           C+ EGF +  TK    DEGKT+R   I R GCKA M V     +  W ++ F  +HNH L
Sbjct: 241 CSKEGFRELRTKKVMTDEGKTKRPRMITRVGCKA-MIVVKKMNSGKWMVSKFEKEHNHSL 299

Query: 641 FTQSKGDLIKPNKRKSHAVKTPTEAT-RSCDVYRQASRLAHLAGRSEEIYEVIMAVMEET 817
                          SH+   P   T    ++ ++A + A     +EEIY V ++ ++E 
Sbjct: 300 ---------------SHSKMIPDSLTVLYNNLCQEAIKFAKEGSVTEEIYHVAVSALKEA 344

Query: 818 FKKASQMEK 844
            +K +++++
Sbjct: 345 AEKVAEVKR 353


>tpg|DAA44445.1| TPA: hypothetical protein ZEAMMB73_228015 [Zea mays]
          Length = 666

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
 Frame = +2

Query: 290 KPVEVELNEIKEPCVGMIFSSFQESKHFYDDYAQTKGFXXXXXXXXXXXXGQDVSSALLV 469
           KP  +E++ ++EP  GM F S + +K FY +YA+  GF               + S  +V
Sbjct: 178 KPHSIEVDPVEEPFEGMEFESEEAAKLFYVNYARLNGFRARISRYCRSRRDNSIISRQIV 237

Query: 470 CTCEGFNQKTTKS--DDEGKTRR-CTIVRTGCKASMRVTNIKGTTAWKITVFSNQHNHEL 640
           C+ EGF +  TK    DEGKT+R   I R GCKA M V     +  W ++ F  +HNH L
Sbjct: 238 CSKEGFREVRTKKVLTDEGKTKRPRMITRVGCKA-MIVVKKMNSGKWMVSKFEKEHNHSL 296

Query: 641 FTQ---------SKGDLIKPNKRKSHAVKTPTE---ATRSC-----------DVYRQASR 751
                       + G+++    + +H  +   E   A   C           ++ ++A +
Sbjct: 297 SYSKMVPSTSNITSGEIVDLAAKGAHPSEVKNEGYSAGTQCNPADSLTILYNNLCQEAIK 356

Query: 752 LAHLAGRSEEIYEVIMAVMEETFKKASQMEK 844
            A     +EEIY V ++ ++E  +K +++++
Sbjct: 357 FAKEGSVTEEIYHVAVSALKEAAEKVAEVKR 387


>ref|XP_003561809.1| PREDICTED: uncharacterized protein LOC100841807 [Brachypodium
           distachyon]
          Length = 676

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 26/215 (12%)
 Frame = +2

Query: 278 SDANKPVEVELNEIKEPCVGMIFSSFQESKHFYDDYAQTKGFXXXXXXXXXXXXGQDVSS 457
           S   KP  ++++ I+EP  GM F + + +K FY +YA   GF               + S
Sbjct: 145 SPMEKPNSIDVDPIEEPVEGMEFDTEEAAKSFYINYASLNGFRARISRYCRSRRDNSIIS 204

Query: 458 ALLVCTCEGFNQKTTKSD--DEGKTRR-CTIVRTGCKASMRVTNIKGTTAWKITVFSNQH 628
             +VC+ EGF +   K +  DEGKT+R   I R GCKA M V     +  W ++ F  +H
Sbjct: 205 RQIVCSKEGFREVRPKKEMTDEGKTKRPRMITRVGCKA-MIVVKKMNSGKWMVSKFEKEH 263

Query: 629 NHELFTQ------------------SKGDLIKPNKRKSHAVKTPTEATRSCDVY-----R 739
           NH L +                   +K       K + ++      +T S  V      +
Sbjct: 264 NHSLLSSKPVHCTSNITSGEVGEFAAKSSDPTEMKFEEYSAGVQCNSTDSLTVLYNNLCQ 323

Query: 740 QASRLAHLAGRSEEIYEVIMAVMEETFKKASQMEK 844
           +A + A     +EEIY V ++ ++E  +K +Q+++
Sbjct: 324 EAMKFAKEGSVTEEIYHVAVSALKEATEKVAQVKR 358



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 42/138 (30%), Positives = 58/138 (42%), Gaps = 2/138 (1%)
 Frame = +2

Query: 326 PCVGMIFSSFQESKHFYDDYAQTKGFXXXXXXXXXXXXGQDVSSALLVCTCEGFNQKTT- 502
           PC GM F S   ++ FY  YA+  GF               + S  +VC+ EGF++    
Sbjct: 24  PCEGMEFESEDAARDFYSIYARNAGFRIRISRYTRSRRDNSIISRRIVCSKEGFHETRNG 83

Query: 503 -KSDDEGKTRRCTIVRTGCKASMRVTNIKGTTAWKITVFSNQHNHELFTQSKGDLIKPNK 679
             S  + K +  T  R GCKA + +  I G + W +T F   HNH      K D+     
Sbjct: 84  EGSHADQKQQERTGTRVGCKAMIMIKKI-GPSKWVVTKFVKNHNHGAVPPKKTDV----- 137

Query: 680 RKSHAVKTPTEATRSCDV 733
           R      +P E   S DV
Sbjct: 138 RSVDQDPSPMEKPNSIDV 155


>gb|ABF95033.1| FAR1 family protein, expressed [Oryza sativa Japonica Group]
          Length = 520

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
 Frame = +2

Query: 293 PVEVELNEIKEPCVGMIFSSFQESKHFYDDYAQTKGFXXXXXXXXXXXXGQDVSSALLVC 472
           P  +E++ I EP  GM F S + +K FY +YA+  GF               + S  +VC
Sbjct: 181 PHSIEVDPIDEPVEGMEFESEEAAKLFYINYARVNGFRARISRYCRSRRDNSIISRQIVC 240

Query: 473 TCEGFNQKTTKSD--DEGKT--RRCTIVRTGCKASMRVTNIKGTTAWKITVFSNQHNHEL 640
           + EGF +   + D  D GKT  R   I R GCKA M V     +  W ++ F  +HNH L
Sbjct: 241 SKEGFREVRARKDITDGGKTTKRPRMITRVGCKA-MIVVKRMNSGKWMVSKFEKEHNHSL 299

Query: 641 FT---------QSKGDLI-------KPNKRKSHAVKTPTE--ATRSCDVY-----RQASR 751
            +          S  ++I        PN+ K+    T  +  +T S  V      ++A +
Sbjct: 300 LSSRAVPITSNDSSREVIDFAATSNDPNEVKAEGCSTGIQCNSTDSLTVLYNHLCQEAIK 359

Query: 752 LAHLAGRSEEIYEVIMAVMEETFKKASQMEK 844
            A     +EEIY V M  ++E  +K S++++
Sbjct: 360 FAKEGSVTEEIYHVAMNALKEAAEKVSEVKR 390


>ref|NP_001049594.1| Os03g0255400 [Oryza sativa Japonica Group]
           gi|108707237|gb|ABF95032.1| FAR1 family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113548065|dbj|BAF11508.1| Os03g0255400 [Oryza sativa
           Japonica Group] gi|215694872|dbj|BAG90063.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222624585|gb|EEE58717.1| hypothetical protein
           OsJ_10174 [Oryza sativa Japonica Group]
          Length = 698

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
 Frame = +2

Query: 293 PVEVELNEIKEPCVGMIFSSFQESKHFYDDYAQTKGFXXXXXXXXXXXXGQDVSSALLVC 472
           P  +E++ I EP  GM F S + +K FY +YA+  GF               + S  +VC
Sbjct: 181 PHSIEVDPIDEPVEGMEFESEEAAKLFYINYARVNGFRARISRYCRSRRDNSIISRQIVC 240

Query: 473 TCEGFNQKTTKSD--DEGKT--RRCTIVRTGCKASMRVTNIKGTTAWKITVFSNQHNHEL 640
           + EGF +   + D  D GKT  R   I R GCKA M V     +  W ++ F  +HNH L
Sbjct: 241 SKEGFREVRARKDITDGGKTTKRPRMITRVGCKA-MIVVKRMNSGKWMVSKFEKEHNHSL 299

Query: 641 FT---------QSKGDLI-------KPNKRKSHAVKTPTE--ATRSCDVY-----RQASR 751
            +          S  ++I        PN+ K+    T  +  +T S  V      ++A +
Sbjct: 300 LSSRAVPITSNDSSREVIDFAATSNDPNEVKAEGCSTGIQCNSTDSLTVLYNHLCQEAIK 359

Query: 752 LAHLAGRSEEIYEVIMAVMEETFKKASQMEK 844
            A     +EEIY V M  ++E  +K S++++
Sbjct: 360 FAKEGSVTEEIYHVAMNALKEAAEKVSEVKR 390


Top