BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022239
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-43
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               82   2e-25
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]    47   6e-10
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]    47   8e-10
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]    47   8e-10

>ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  109 bits (273), Expect(2) = 2e-43
 Identities = 52/74 (70%), Positives = 61/74 (82%)
 Frame = -1

Query: 612 MEGTSSTTGVVVPNLSGFMSIKLDRTNYPLWLAEISPILKSKNFMGFVDGTNPCPTKYKT 433
           ME  +S+TGVVVP+ SGFMSIKLDRTNYPLWLA+I PILKSKN MGFV GTNPCP ++K+
Sbjct: 1   MEAINSSTGVVVPSHSGFMSIKLDRTNYPLWLAQIVPILKSKNLMGFVTGTNPCPPEFKS 60

Query: 432 DDNG*QTPEEDPDY 391
           + +G  T E DP Y
Sbjct: 61  NTDGTITTEVDPRY 74



 Score = 92.8 bits (229), Expect(2) = 2e-43
 Identities = 48/77 (62%), Positives = 53/77 (68%)
 Frame = -3

Query: 388 W*QKDQMMXXXXXXXXXXXXXXIVARFSSSHETWKSLEKRYASQLHNRILQLRHELFSTK 209
           W Q+DQM+               VARF+SS  TW SLEKRYASQ  NRILQLRH+L + K
Sbjct: 77  WHQQDQMILSWINNSLSPTVLSTVARFTSSQATWSSLEKRYASQSKNRILQLRHDLLTVK 136

Query: 208 GEGLSISDFVDKINHIA 158
           GEGLSISDFVDKIN IA
Sbjct: 137 GEGLSISDFVDKINQIA 153


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 82.4 bits (202), Expect(2) = 2e-25
 Identities = 40/74 (54%), Positives = 52/74 (70%)
 Frame = -1

Query: 612 MEGTSSTTGVVVPNLSGFMSIKLDRTNYPLWLAEISPILKSKNFMGFVDGTNPCPTKYKT 433
           M  +SST     P++S F++IKLDRTNYPLWLA+I+PILKS+   GFVDGTN CP  +  
Sbjct: 1   MASSSSTENT--PSVSNFLTIKLDRTNYPLWLAQITPILKSRKLWGFVDGTNLCPPCFLK 58

Query: 432 DDNG*QTPEEDPDY 391
           D  G  T + +PD+
Sbjct: 59  DKAGQLTDQVNPDF 72



 Score = 60.1 bits (144), Expect(2) = 2e-25
 Identities = 32/77 (41%), Positives = 44/77 (57%)
 Frame = -3

Query: 388 W*QKDQMMXXXXXXXXXXXXXXIVARFSSSHETWKSLEKRYASQLHNRILQLRHELFSTK 209
           W  +DQM+               VAR +S H TW +L  R+ASQ  +R+LQLR +L  T 
Sbjct: 75  WILQDQMVLSWINGSLTPKVLSTVARSTSLHATWTALATRFASQSQHRVLQLRADLLRTT 134

Query: 208 GEGLSISDFVDKINHIA 158
              +SISD++DK+N IA
Sbjct: 135 RGTMSISDYLDKLNSIA 151


>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
          Length = 2220

 Score = 47.4 bits (111), Expect(2) = 6e-10
 Identities = 26/82 (31%), Positives = 41/82 (50%)
 Frame = -3

Query: 394  LCW*QKDQMMXXXXXXXXXXXXXXIVARFSSSHETWKSLEKRYASQLHNRILQLRHELFS 215
            + W ++D+ +               +   +SSH  W +LEK ++S    RI+QLR EL S
Sbjct: 928  VAWRRQDRTILSWLYSSLTPAIMAQIIGHNSSHSAWNALEKTFSSSSRARIMQLRLELQS 987

Query: 214  TKGEGLSISDFVDKINHIATIL 149
            TK   LS+ D++ K+   A  L
Sbjct: 988  TKKGSLSMIDYIMKVKGAADSL 1009



 Score = 42.7 bits (99), Expect(2) = 6e-10
 Identities = 18/43 (41%), Positives = 28/43 (65%)
 Frame = -1

Query: 570  LSGFMSIKLDRTNYPLWLAEISPILKSKNFMGFVDGTNPCPTK 442
            L+  + +KLDRTNY LW ++I  ++ +  F  F+DG + CP K
Sbjct: 874  LNHTLLVKLDRTNYILWKSQIDNVVFANGFEDFIDGFSICPDK 916


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score = 47.0 bits (110), Expect(2) = 8e-10
 Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
 Frame = -1

Query: 597 STTGVVVPN---LSGFMSIKLDRTNYPLWLAEISPILKSKNFMGFVDGTNPCPTK 442
           S+T   +P+   L+  + +KLDRTNY LW ++I  ++ +  F  F+DGT+ CP K
Sbjct: 20  SSTMASIPSYQMLNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEK 74



 Score = 42.7 bits (99), Expect(2) = 8e-10
 Identities = 23/79 (29%), Positives = 39/79 (49%)
 Frame = -3

Query: 394 LCW*QKDQMMXXXXXXXXXXXXXXIVARFSSSHETWKSLEKRYASQLHNRILQLRHELFS 215
           + W ++D+ +               +   ++SH  W +LE  ++S    RI+QLR EL S
Sbjct: 86  VAWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSSSSRARIMQLRLELQS 145

Query: 214 TKGEGLSISDFVDKINHIA 158
           TK   +S+ D++ KI   A
Sbjct: 146 TKKGSMSMIDYIMKIKGAA 164


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score = 46.6 bits (109), Expect(2) = 8e-10
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = -1

Query: 558 MSIKLDRTNYPLWLAEISPILKSKNFMGFVDGTNPCPTK 442
           + +KLDRTNY LW ++I  ++ +  F  F+DGT+ CP K
Sbjct: 33  LPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSXCPEK 71



 Score = 43.1 bits (100), Expect(2) = 8e-10
 Identities = 24/82 (29%), Positives = 40/82 (48%)
 Frame = -3

Query: 394 LCW*QKDQMMXXXXXXXXXXXXXXIVARFSSSHETWKSLEKRYASQLHNRILQLRHELFS 215
           + W ++D+ +               +   +SSH  W +LEK ++S    RI+QLR E  S
Sbjct: 83  VAWRRQDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALEKIFSSCSRARIMQLRLEFQS 142

Query: 214 TKGEGLSISDFVDKINHIATIL 149
           TK   +S+ D++ K+   A  L
Sbjct: 143 TKKGSMSMIDYIMKVKGAADSL 164