BLASTX nr result
ID: Cimicifuga21_contig00022233
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00022233
(1258 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|2... 105 3e-20
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g... 102 3e-19
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2... 100 1e-18
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g... 98 4e-18
ref|NP_191476.1| putative F-box/LRR-repeat protein [Arabidopsis ... 91 6e-16
>ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|222873905|gb|EEF11036.1|
predicted protein [Populus trichocarpa]
Length = 335
Score = 105 bits (261), Expect = 3e-20
Identities = 81/282 (28%), Positives = 135/282 (47%), Gaps = 3/282 (1%)
Frame = +1
Query: 160 LNSSNNKKTKTRDAIDRITDLPEPIVHYILSFLDMKEVMQTSLVSRCWRDLWKCLPILNF 339
+ S K++ + DRI+ LP ++H+ILSFLD +V+QT ++S+ W ++WK P L+F
Sbjct: 1 MESRTRKRSSLNNNEDRISTLPNVLLHHILSFLDAVQVVQTCVLSKRWMNVWKSHPYLDF 60
Query: 340 NHSLWNKIVAKEKQYADVLEGFYTCNFDRKDEFMNFVDQVLLLRQGSNICKFQLVGDDYC 519
N ++ +++ Y D D + F +F+ VL+ R K L C
Sbjct: 61 NFETFSSLIS--SYYYD----------DDMNNFTDFISHVLVRRNNVKAFKLSLDTRRDC 108
Query: 520 EGDRIVTWIIFLVRQHAQEVHINISPPEAFGGNDFILSPEFYELPHCLF-ISGIKVFKLQ 696
+ + + I + V+ H +E+ IN + + LP C F ++ KL+
Sbjct: 109 QYSVVESLIYYAVKHHVEEISINTAHWDV-----------PIVLPRCFFDCESLRSLKLK 157
Query: 697 VDTRDPFFTTFQLPHSMCSAVHLKSLHLVSAKLPKGDSNGELVLSCPVLENLILDGCEFR 876
VD LP S+ LK+LHL A+ + +G++ SCP LENL ++
Sbjct: 158 VD------GGLALPKSL-GLQSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDICLN 206
Query: 877 HLNILTISALHLQNL-VLEDEWGR-NGSCKIKIVTPNLISFQ 996
+ I AL L++L +L + R CK+ +V P L SF+
Sbjct: 207 VIENFNIHALSLKSLEILNWRYNRIKQGCKVMLVAPKLTSFK 248
>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
gi|222873903|gb|EEF11034.1| f-box family protein [Populus
trichocarpa]
Length = 453
Score = 102 bits (253), Expect = 3e-19
Identities = 100/393 (25%), Positives = 165/393 (41%), Gaps = 39/393 (9%)
Frame = +1
Query: 178 KKTKTRDAIDRITDLPEPIVHYILSFLDMKEVMQTSLVSRCWRDLWKCLPILNFNHSLWN 357
K++ + DRI+ LP ++H+ILSF+D +V+QT ++S+ W ++WK P L+FN ++
Sbjct: 26 KRSSLNNNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFS 85
Query: 358 KIVAKEKQYADVLEGFYTCNFDRKDEFMNFVDQVLLLRQGSNICKFQLVGDDYCEGDRIV 537
++ Y D D + F +F+ VL+ R K L C+ +
Sbjct: 86 SLI--NSDYYD----------DDMNNFTDFIYHVLVRRNNVKAFKLSLDTRRDCQYSVVE 133
Query: 538 TWIIFLVRQHAQEVHINISPPEAFGGNDFILSPEFYELPHCLF-ISGIKVFKLQVDTRDP 714
+ I + V+ H +E+ IN + + LP C F ++ KL+VD
Sbjct: 134 SLIYYAVKHHVEEISINTAHWDV-----------PIVLPRCFFDCESLRSLKLKVD---- 178
Query: 715 FFTTFQLPHSMCSAVHLKSLHLVSAKLPKGDSNGELVLSCPVLENLILDGCEFRHLNILT 894
LP S+ LK+LHL A+ + +G++ SCP LENL ++ +
Sbjct: 179 --GGLALPKSL-GLQSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDICLNVIENFN 231
Query: 895 ISALHLQNL-VLEDEWGR-NGSCKIKIVTPNLISFQ------------------------ 996
I AL L++L +L + R CK+ +V P L SF+
Sbjct: 232 IHALSLKSLEILNWRYNRIKQGCKVMLVAPKLTSFKFDGNTPLFWSDVNLTSLDDVNVVL 291
Query: 997 ---------GLYIFEYCYL---ENLSCLFHANILSLVHQEVQAKSFVKNLNEIRNATTPE 1140
Y+ E Y+ + N++ ++HQ AKS ++N I +
Sbjct: 292 QRYHHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILS--- 348
Query: 1141 LSGWWDFKTSLESPNLFNLLPETFHNLKCLKLQ 1239
E P + P F NLK LKL+
Sbjct: 349 -----------EVPAALDKHPSPFSNLKYLKLK 370
>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
predicted protein [Populus trichocarpa]
Length = 378
Score = 99.8 bits (247), Expect = 1e-18
Identities = 103/402 (25%), Positives = 169/402 (42%), Gaps = 42/402 (10%)
Frame = +1
Query: 160 LNSSNNKKTKTRDAIDRITDLPEPIVHYILSFLDMKEVMQTSLVSRCWRDLWKCLPILNF 339
+ S K++ + DRI+ LP ++H ILSF+D +V+QT ++S+ W ++WK P L+F
Sbjct: 1 MESRTRKRSSLNNNEDRISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDF 60
Query: 340 NHSLWNKIVAKEKQYADVLEGFYTCNFDRKDEFMNFVDQVLLLRQGSNICKFQLVGDDYC 519
N ++ ++ + +Y D F +F++QVL+ R K L D C
Sbjct: 61 NFETFSSLINSD---------YYE---DEMVNFTDFINQVLVRRNNFKAIKISL---DLC 105
Query: 520 EGDR---IVTWIIFLVRQHAQEVHINISPPEAFGGNDFILSPEFYELPHCLF-ISGIKVF 687
R + + I + V+ HA+E+ I D LP C F ++
Sbjct: 106 GHTRYSLVESLIYYAVKHHAEEICI-----------DTACRDVPIVLPRCFFNCESLRSL 154
Query: 688 KLQVDTRDPFFTTFQLPHSMCSAVHLKSLHLVSAKLPKGDSNGELVLSCPVLENLILDGC 867
KL++D LP S+ LK+LHL A+ + +G++ SCP LENL ++
Sbjct: 155 KLRID------GGIALPKSL-GLPSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDI 203
Query: 868 EFRHLNILTISALHLQNL-VLEDEWGR-NGSCKIKIVTPNLISFQ--------------- 996
+ I AL+L++L +L + R CK+ + P L SF+
Sbjct: 204 CLNTIENFNIHALNLKSLEILNWRYSRIMRGCKVMLFAPKLTSFKFDGNTPLFWSEVNLT 263
Query: 997 ------------------GLYIFEYCYL---ENLSCLFHANILSLVHQEVQAKSFVKNLN 1113
Y+ E Y+ + F ++L ++HQ AKS ++N
Sbjct: 264 SLDDVNVVLQRYYYRHDYQFYVDEDEYISGEDETKQGFCLDLLKMLHQFCSAKSLTLSMN 323
Query: 1114 EIRNATTPELSGWWDFKTSLESPNLFNLLPETFHNLKCLKLQ 1239
I + + P N P F NLK LKL+
Sbjct: 324 II--------------EVLSKVPAALNKHPSPFSNLKYLKLK 351
>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
gi|222873902|gb|EEF11033.1| f-box family protein [Populus
trichocarpa]
Length = 453
Score = 98.2 bits (243), Expect = 4e-18
Identities = 99/395 (25%), Positives = 167/395 (42%), Gaps = 41/395 (10%)
Frame = +1
Query: 178 KKTKTRDAIDRITDLPEPIVHYILSFLDMKEVMQTSLVSRCWRDLWKCLPILNFNHSLWN 357
K++ + DRI+ LP ++H+ILSF+D +V+QT ++S+ W ++WK P L+FN ++
Sbjct: 26 KRSSLNNNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFS 85
Query: 358 KIVAKEKQYADVLEGFYTCNFDRKDEFMNFVDQVLLLRQGSNICKFQL--VGDDYCEGDR 531
++ Y D D + F +F+ VL+ R K L + D C
Sbjct: 86 SLI--NSDYYD----------DEVNNFTDFIYHVLVRRHNLKAVKISLDILRDTRC--SL 131
Query: 532 IVTWIIFLVRQHAQEVHINISPPEAFGGNDFILSPEFYELPHCLF-ISGIKVFKLQVDTR 708
+ + I + V+ H +E+ +N + + LP C F ++ KL+VD
Sbjct: 132 VESLIYYAVKHHVEEISVNTAHWDM-----------PIVLPRCFFDCESLRSLKLKVD-- 178
Query: 709 DPFFTTFQLPHSMCSAVHLKSLHLVSAKLPKGDSNGELVLSCPVLENLILDGCEFRHLNI 888
LP S+ LK+LHL A+ + +G++ +CP LENL ++ +
Sbjct: 179 ----GGIALPKSL-GLQSLKTLHLGGAR----NFDGKIFSTCPNLENLKIEDIYLNTIEN 229
Query: 889 LTISALHLQNL-VLEDEWGR-NGSCKIKIVTPNLISFQ---------------------- 996
I AL+L++L +L +GR CK+ + P L SF+
Sbjct: 230 FNIHALNLKSLEILNWRYGRIMRGCKVMLFAPKLTSFKFYGNTPLFWSEVNLTSLDDVNV 289
Query: 997 -----------GLYIFEYCYL---ENLSCLFHANILSLVHQEVQAKSFVKNLNEIRNATT 1134
Y+ E Y+ + N++ ++HQ AKS ++N I +
Sbjct: 290 VLQRYQHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILS- 348
Query: 1135 PELSGWWDFKTSLESPNLFNLLPETFHNLKCLKLQ 1239
E P + P F NLK LKL+
Sbjct: 349 -------------EVPAALDKHPSPFSNLKYLKLK 370
>ref|NP_191476.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|75264310|sp|Q9LX54.1|FBL62_ARATH RecName:
Full=Putative F-box/LRR-repeat protein At3g59170
gi|7801667|emb|CAB91587.1| putative protein [Arabidopsis
thaliana] gi|332646364|gb|AEE79885.1| putative
F-box/LRR-repeat protein [Arabidopsis thaliana]
Length = 473
Score = 90.9 bits (224), Expect = 6e-16
Identities = 103/366 (28%), Positives = 159/366 (43%), Gaps = 27/366 (7%)
Frame = +1
Query: 205 DRITDLPEPIVHYILSFLDMKEVMQTSLVSRCWRDLWKCLPILNFNHSLWNKIVAKEKQY 384
D I LP+ ++ +ILSFL KE TSL+SR WR L +P L F+ S++ + ++K+
Sbjct: 7 DMINVLPDALLCHILSFLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSVY---LHRDKRV 63
Query: 385 ADVL--EGF----YTCNFDRK---DEFMNFVDQVLLLRQGSNICKFQLV---GDDYCEGD 528
+ L +GF N RK F +FVD++L L+ S + KF L G D + D
Sbjct: 64 KNTLHEKGFVGFVLLVNNKRKKLSTSFPDFVDRILALQGNSPLDKFSLKMVDGHDPVDPD 123
Query: 529 RIVTWIIFLVRQHAQEVHINISPPEAFGGNDFILSPEFYELPHCLFISGIKVFKLQVDTR 708
+V WI ++ + ++H+ + N++ P LP +F+S V KL + R
Sbjct: 124 SVVPWIHKVLVRGVSDLHLVVDM------NEWTSDP----LPSRIFLSETLV-KLTIKIR 172
Query: 709 DPFFTTFQLPHSMCSAVHLKSLHLVSAKLPKGDSNGELVLS-CPVLENLILDGCEFRHLN 885
D F + H LK+L+L S + D +LS CPVLE L+LDG
Sbjct: 173 DGPFIDVKHVH----LPKLKTLYLQSVMFDENDIGFRKLLSGCPVLEELVLDGMGSCVWT 228
Query: 886 ILTISALHLQNLV-----------LEDEWGRNGSCKIKIVTPNLISFQGLYIFEYCYLEN 1032
T+S L+ L + D+ N + TPNL+ + + Y +
Sbjct: 229 SFTVSVATLKRLTFCCQKMSSFGYMHDDENPN---NVSFDTPNLVYLEYAQVIANNYPK- 284
Query: 1033 LSCLFHANILSLVHQEVQAKSFVKNLNEIR---NATTPELSGWWDFKTSLESPNLFNLLP 1203
N LV ++ V + E+R N + DF L + + L P
Sbjct: 285 ------VNFDLLVEAKIDIWMTVDQIREVRLRKNEVNCMVGNATDFIVGLRNVRVLYLSP 338
Query: 1204 ETFHNL 1221
ET L
Sbjct: 339 ETLEVL 344