BLASTX nr result

ID: Cimicifuga21_contig00022230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022230
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531025.1| Vesicle transport protein GOT1B, putative [R...   177   2e-42
ref|XP_002321118.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42
ref|XP_004138350.1| PREDICTED: vesicle transport protein GOT1B-l...   176   4e-42
ref|XP_002271144.1| PREDICTED: vesicle transport protein GOT1A [...   176   4e-42
ref|NP_001132031.1| uncharacterized protein LOC100193440 [Zea ma...   171   8e-41

>ref|XP_002531025.1| Vesicle transport protein GOT1B, putative [Ricinus communis]
           gi|223529400|gb|EEF31363.1| Vesicle transport protein
           GOT1B, putative [Ricinus communis]
          Length = 135

 Score =  177 bits (448), Expect = 2e-42
 Identities = 82/131 (62%), Positives = 96/131 (73%)
 Frame = -1

Query: 559 MAYEMTEQKRVXXXXXXXXXXXXXXXXXXXFDRGLFALGNIFWLSGVALLLGWRSTWQLF 380
           MAYE+ EQK++                   FDRGL ALGNIFWL+GVA+LLGW STW LF
Sbjct: 1   MAYELNEQKKIGLGLIGFGILFSFLGVLLFFDRGLLALGNIFWLTGVAILLGWHSTWNLF 60

Query: 379 TKKANYKGSLPFLLGLFLIFVRWPIVGIIVETYGSIILFSGFWPSIKAFLYQIPFVGWIL 200
           T +ANYKG++ FLLGLF IFVRWPIVGI++E YG I LF GFWP++K FLYQIP VGWI+
Sbjct: 61  TNRANYKGTISFLLGLFFIFVRWPIVGIVLEIYGCIALFGGFWPTVKVFLYQIPVVGWII 120

Query: 199 QYPFMLLDGLR 167
           QYP +LL  LR
Sbjct: 121 QYPVLLLGRLR 131


>ref|XP_002321118.1| predicted protein [Populus trichocarpa] gi|222861891|gb|EEE99433.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  177 bits (448), Expect = 2e-42
 Identities = 85/132 (64%), Positives = 95/132 (71%)
 Frame = -1

Query: 559 MAYEMTEQKRVXXXXXXXXXXXXXXXXXXXFDRGLFALGNIFWLSGVALLLGWRSTWQLF 380
           MAYE+ E K++                   FDRGL ALGNIFWLSGVA+LLGWRSTW+LF
Sbjct: 1   MAYEINELKKIGLGLIGFGIFFTFLGALLFFDRGLLALGNIFWLSGVAILLGWRSTWKLF 60

Query: 379 TKKANYKGSLPFLLGLFLIFVRWPIVGIIVETYGSIILFSGFWPSIKAFLYQIPFVGWIL 200
           T + NYKGS+ FLLGLF IFVRWP+VGII E Y  I LF GFWPS+K FLYQIP VGWI+
Sbjct: 61  TNRENYKGSVCFLLGLFFIFVRWPVVGIIFEIYSCIALFGGFWPSVKVFLYQIPVVGWII 120

Query: 199 QYPFMLLDGLRR 164
           QYP  LLD LRR
Sbjct: 121 QYPITLLDYLRR 132


>ref|XP_004138350.1| PREDICTED: vesicle transport protein GOT1B-like isoform 2 [Cucumis
           sativus] gi|449441159|ref|XP_004138351.1| PREDICTED:
           vesicle transport protein GOT1B-like isoform 3 [Cucumis
           sativus] gi|449496741|ref|XP_004160214.1| PREDICTED:
           vesicle transport protein GOT1B-like isoform 2 [Cucumis
           sativus] gi|449496744|ref|XP_004160215.1| PREDICTED:
           vesicle transport protein GOT1B-like isoform 3 [Cucumis
           sativus]
          Length = 135

 Score =  176 bits (445), Expect = 4e-42
 Identities = 84/135 (62%), Positives = 95/135 (70%)
 Frame = -1

Query: 559 MAYEMTEQKRVXXXXXXXXXXXXXXXXXXXFDRGLFALGNIFWLSGVALLLGWRSTWQLF 380
           MAYE+TEQKRV                   FDRGL ALGN+FWL GVALLLGW STW LF
Sbjct: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60

Query: 379 TKKANYKGSLPFLLGLFLIFVRWPIVGIIVETYGSIILFSGFWPSIKAFLYQIPFVGWIL 200
           T +ANYKGS  FLLGLF IFVRWPI+GI++E  G  +LF GFWPSIK FLYQIP +GW+L
Sbjct: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120

Query: 199 QYPFMLLDGLRRSFG 155
            YP M+L+ L R  G
Sbjct: 121 PYPIMILESLWRGSG 135


>ref|XP_002271144.1| PREDICTED: vesicle transport protein GOT1A [Vitis vinifera]
           gi|297745163|emb|CBI39155.3| unnamed protein product
           [Vitis vinifera]
          Length = 123

 Score =  176 bits (445), Expect = 4e-42
 Identities = 84/122 (68%), Positives = 93/122 (76%)
 Frame = -1

Query: 559 MAYEMTEQKRVXXXXXXXXXXXXXXXXXXXFDRGLFALGNIFWLSGVALLLGWRSTWQLF 380
           MAYEMTEQKRV                   FDRGL ALGNIFWL+GVALL+GWRSTW LF
Sbjct: 1   MAYEMTEQKRVGLGLIGFGIFFTFLGVILFFDRGLLALGNIFWLTGVALLIGWRSTWNLF 60

Query: 379 TKKANYKGSLPFLLGLFLIFVRWPIVGIIVETYGSIILFSGFWPSIKAFLYQIPFVGWIL 200
           + +ANYKGS+ FLLGLFLIFVRWPIVGII E YG I+LF GFWPS+K FLYQIP VGWIL
Sbjct: 61  SNRANYKGSISFLLGLFLIFVRWPIVGIIFEIYGYIVLFGGFWPSVKVFLYQIPVVGWIL 120

Query: 199 QY 194
           ++
Sbjct: 121 RF 122


>ref|NP_001132031.1| uncharacterized protein LOC100193440 [Zea mays]
           gi|194693248|gb|ACF80708.1| unknown [Zea mays]
           gi|195623924|gb|ACG33792.1| golgi transport 1 protein B
           [Zea mays] gi|413922933|gb|AFW62865.1| golgi transport 1
           protein B isoform 1 [Zea mays]
           gi|413922934|gb|AFW62866.1| golgi transport 1 protein B
           isoform 2 [Zea mays]
          Length = 135

 Score =  171 bits (434), Expect = 8e-41
 Identities = 82/132 (62%), Positives = 98/132 (74%)
 Frame = -1

Query: 559 MAYEMTEQKRVXXXXXXXXXXXXXXXXXXXFDRGLFALGNIFWLSGVALLLGWRSTWQLF 380
           MAYE++E K++                   FDRGL ALGNIF+L+GV LLLGW+S WQLF
Sbjct: 1   MAYEISEIKKIGIGLVGFGILFSFLGVILFFDRGLLALGNIFFLTGVGLLLGWQSMWQLF 60

Query: 379 TKKANYKGSLPFLLGLFLIFVRWPIVGIIVETYGSIILFSGFWPSIKAFLYQIPFVGWIL 200
           TKKAN KGS+PF +GLFL+FVRWP+ GII+E YGS +LFSG+ P I+AFLYQIP +GWIL
Sbjct: 61  TKKANLKGSVPFFIGLFLLFVRWPVAGIIMELYGSFVLFSGYGPPIQAFLYQIPIIGWIL 120

Query: 199 QYPFMLLDGLRR 164
           QYPF LL  LRR
Sbjct: 121 QYPFQLLGQLRR 132


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