BLASTX nr result

ID: Cimicifuga21_contig00022220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022220
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial...   111   7e-23
ref|XP_004159453.1| PREDICTED: uncharacterized LOC101212713 [Cuc...   107   8e-22
ref|XP_004140920.1| PREDICTED: uncharacterized protein LOC101212...   107   8e-22
ref|XP_002302508.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|NP_001031562.1| uncharacterized protein [Arabidopsis thalian...   100   2e-19

>ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial [Vitis vinifera]
           gi|296088479|emb|CBI37470.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/66 (74%), Positives = 56/66 (84%)
 Frame = -2

Query: 458 NTSWIDEDGNEHVRISFVIRGPHGTGDVFTEMFKDKVDKEWKYTYLIVEIKAPSPLQLIL 279
           N  W DEDG EHV ++F IRGPHG G V+TEMFKDKVDK+WK+TYLI EIK+PSP QL+L
Sbjct: 249 NRIWTDEDGVEHVEVNFYIRGPHGAGKVYTEMFKDKVDKQWKFTYLIAEIKSPSPAQLML 308

Query: 278 ESYVPA 261
           ESYVPA
Sbjct: 309 ESYVPA 314


>ref|XP_004159453.1| PREDICTED: uncharacterized LOC101212713 [Cucumis sativus]
          Length = 323

 Score =  107 bits (268), Expect = 8e-22
 Identities = 47/66 (71%), Positives = 56/66 (84%)
 Frame = -2

Query: 458 NTSWIDEDGNEHVRISFVIRGPHGTGDVFTEMFKDKVDKEWKYTYLIVEIKAPSPLQLIL 279
           N  W DEDG E V ++F IRGPHG G V+TEMFKD+VDK+WK+TYLIVE+K+PSP QLIL
Sbjct: 258 NRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQVDKQWKFTYLIVEVKSPSPAQLIL 317

Query: 278 ESYVPA 261
           ESY+PA
Sbjct: 318 ESYMPA 323


>ref|XP_004140920.1| PREDICTED: uncharacterized protein LOC101212713 [Cucumis sativus]
          Length = 323

 Score =  107 bits (268), Expect = 8e-22
 Identities = 47/66 (71%), Positives = 56/66 (84%)
 Frame = -2

Query: 458 NTSWIDEDGNEHVRISFVIRGPHGTGDVFTEMFKDKVDKEWKYTYLIVEIKAPSPLQLIL 279
           N  W DEDG E V ++F IRGPHG G V+TEMFKD+VDK+WK+TYLIVE+K+PSP QLIL
Sbjct: 258 NRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQVDKQWKFTYLIVEVKSPSPAQLIL 317

Query: 278 ESYVPA 261
           ESY+PA
Sbjct: 318 ESYMPA 323


>ref|XP_002302508.1| predicted protein [Populus trichocarpa] gi|222844234|gb|EEE81781.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/66 (71%), Positives = 53/66 (80%)
 Frame = -2

Query: 458 NTSWIDEDGNEHVRISFVIRGPHGTGDVFTEMFKDKVDKEWKYTYLIVEIKAPSPLQLIL 279
           N  + DEDG EHV+I+F IRGPHG G V  EMFKDKVDK+WKYTYLIVE+  PS  QLIL
Sbjct: 169 NRIFTDEDGVEHVQINFYIRGPHGAGKVSAEMFKDKVDKQWKYTYLIVEVMQPSRSQLIL 228

Query: 278 ESYVPA 261
           ESY+PA
Sbjct: 229 ESYMPA 234


>ref|NP_001031562.1| uncharacterized protein [Arabidopsis thaliana]
           gi|449061898|sp|Q1G3L1.1|TIM21_ARATH RecName:
           Full=Probable mitochondrial import inner membrane
           translocase subunit TIM21; AltName: Full=Protein
           SEGREGATION DISTORTION 3; Flags: Precursor
           gi|98961813|gb|ABF59236.1| unknown protein [Arabidopsis
           thaliana] gi|110737180|dbj|BAF00539.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332656415|gb|AEE81815.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 269

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = -2

Query: 458 NTSWIDEDGNEHVRISFVIRGPHGTGDVFTEMFKDKVDKEWKYTYLIVEIKAPSPLQLIL 279
           N  + DEDG EHV ++F IRGP G G V+TEMFKDK +KEWKYTYLIVEI  PSP +L+L
Sbjct: 204 NRVFTDEDGVEHVEVNFYIRGPQGAGKVYTEMFKDKAEKEWKYTYLIVEILTPSPAKLML 263

Query: 278 ESYVPA 261
           ESY+PA
Sbjct: 264 ESYLPA 269


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